RNA–Protein interactions for RNA: ENST00000539215.5

POLE-212, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 5

Gene POLE, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-212ENST00000539215 NISCHQ9Y2I1 1504 aa30.95■■■□□ 2.55
POLE-212ENST00000539215 CCDC180Q9P1Z9 1646 aa27.71■■■□□ 2.03
POLE-212ENST00000539215 ABCC9O60706 1549 aa27.41■■□□□ 1.98
POLE-212ENST00000539215 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
POLE-212ENST00000539215 NACADO15069 1562 aa26.12■■□□□ 1.77
POLE-212ENST00000539215 DCAF8L2P0C7V8 631 aa25.93■■□□□ 1.74
POLE-212ENST00000539215 MYO15BQ96JP2 1530 aa25.85■■□□□ 1.73
POLE-212ENST00000539215 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
POLE-212ENST00000539215 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
POLE-212ENST00000539215 DCAF1Q9Y4B6 1507 aa25.61■■□□□ 1.69
POLE-212ENST00000539215 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
POLE-212ENST00000539215 DNAJC5BQ9UF47 199 aa25.48■■□□□ 1.67
POLE-212ENST00000539215 BICRAQ9NZM4 1560 aa25.47■■□□□ 1.67
POLE-212ENST00000539215 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
POLE-212ENST00000539215 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
POLE-212ENST00000539215 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
POLE-212ENST00000539215 CC2D2AQ9P2K1 1620 aa24.81■■□□□ 1.56
POLE-212ENST00000539215 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
POLE-212ENST00000539215 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
POLE-212ENST00000539215 NCAPD3P42695 1498 aa24.1■■□□□ 1.45
POLE-212ENST00000539215 ATAD2BQ9ULI0 1458 aa24.05■■□□□ 1.44
POLE-212ENST00000539215 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
POLE-212ENST00000539215 SMARCA2P51531 1590 aa24.01■■□□□ 1.43
POLE-212ENST00000539215 HMGXB3Q12766 1538 aa23.96■■□□□ 1.43
POLE-212ENST00000539215 PEG3Q9GZU2 1588 aa23.89■■□□□ 1.41
POLE-212ENST00000539215 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
POLE-212ENST00000539215 BAZ1BQ9UIG0 1483 aaKnown RBP23.83■■□□□ 1.41
POLE-212ENST00000539215 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
POLE-212ENST00000539215 NESP48681 1621 aa23.62■■□□□ 1.37
POLE-212ENST00000539215 WIZO95785 1651 aa23.58■■□□□ 1.37
POLE-212ENST00000539215 CUX2O14529 1486 aa23.56■■□□□ 1.36
POLE-212ENST00000539215 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
POLE-212ENST00000539215 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
POLE-212ENST00000539215 THOC2Q8NI27 1593 aaKnown RBP23.38■■□□□ 1.33
POLE-212ENST00000539215 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
POLE-212ENST00000539215 PDS5BQ9NTI5 1447 aa23.36■■□□□ 1.33
POLE-212ENST00000539215 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
POLE-212ENST00000539215 TOP2AP11388 1531 aaKnown RBP23.31■■□□□ 1.32
POLE-212ENST00000539215 DNAJC5Q9H3Z4 198 aa23.23■■□□□ 1.31
POLE-212ENST00000539215 CFTRP13569 1480 aa23.16■■□□□ 1.3
POLE-212ENST00000539215 MRC2Q9UBG0 1479 aa23.16■■□□□ 1.3
POLE-212ENST00000539215 WDR62O43379 1518 aa23.12■■□□□ 1.29
POLE-212ENST00000539215 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
POLE-212ENST00000539215 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
POLE-212ENST00000539215 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
POLE-212ENST00000539215 PRDM2Q13029 1718 aa23.01■■□□□ 1.27
POLE-212ENST00000539215 URB2Q14146 1524 aaKnown RBP22.9■■□□□ 1.26
POLE-212ENST00000539215 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
POLE-212ENST00000539215 TOPBP1Q92547 1522 aa22.7■■□□□ 1.22
POLE-212ENST00000539215 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
POLE-212ENST00000539215 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
POLE-212ENST00000539215 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
POLE-212ENST00000539215 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
POLE-212ENST00000539215 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
POLE-212ENST00000539215 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
POLE-212ENST00000539215 POLA1P09884 1462 aaPredicted RBP22.48■■□□□ 1.19
POLE-212ENST00000539215 OSCARQ8IYS5 282 aa22.48■■□□□ 1.19
POLE-212ENST00000539215 CUX1P39880 1505 aa22.39■■□□□ 1.17
POLE-212ENST00000539215 AQRO60306 1485 aaKnown RBP eCLIP22.38■■□□□ 1.175e-9■■□□□ 12.1
POLE-212ENST00000539215 FGD5Q6ZNL6 1462 aa22.37■■□□□ 1.17
POLE-212ENST00000539215 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
POLE-212ENST00000539215 SOGA1O94964 1423 aa22.36■■□□□ 1.17
POLE-212ENST00000539215 WDR97A6NE52 1622 aa22.31■■□□□ 1.16
POLE-212ENST00000539215 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
POLE-212ENST00000539215 CHD1O14646 1710 aa22.28■■□□□ 1.16
POLE-212ENST00000539215 TDRD9Q8NDG6 1382 aaKnown RBP22.27■■□□□ 1.16
POLE-212ENST00000539215 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.15
POLE-212ENST00000539215 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.15
POLE-212ENST00000539215 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.15
POLE-212ENST00000539215 SNAPC4Q5SXM2 1469 aa22.18■■□□□ 1.14
POLE-212ENST00000539215 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
POLE-212ENST00000539215 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
POLE-212ENST00000539215 FBLN2P98095 1184 aa22.15■■□□□ 1.14
POLE-212ENST00000539215 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
POLE-212ENST00000539215 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
POLE-212ENST00000539215 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
POLE-212ENST00000539215 BIVM-ERCC5R4GMW8 1640 aa22.13■■□□□ 1.13
POLE-212ENST00000539215 TOP2BQ02880 1626 aa22.12■■□□□ 1.13
POLE-212ENST00000539215 GAPVD1Q14C86 1478 aa22.11■■□□□ 1.13
POLE-212ENST00000539215 ABCA5Q8WWZ7 1642 aa22.11■■□□□ 1.13
POLE-212ENST00000539215 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
POLE-212ENST00000539215 SYNJ1O43426 1573 aa22.08■■□□□ 1.13
POLE-212ENST00000539215 SYNJ2O15056 1496 aa22.07■■□□□ 1.12
POLE-212ENST00000539215 CHMP7Q8WUX9 453 aaPredicted RBP22.05■■□□□ 1.12
POLE-212ENST00000539215 CLASP1Q7Z460 1538 aa22.03■■□□□ 1.12
POLE-212ENST00000539215 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
POLE-212ENST00000539215 CYB5RLQ6IPT4 315 aa21.93■■□□□ 1.1
POLE-212ENST00000539215 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
POLE-212ENST00000539215 GRIN2AQ12879 1464 aa21.88■■□□□ 1.09
POLE-212ENST00000539215 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
POLE-212ENST00000539215 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
POLE-212ENST00000539215 NUP160Q12769 1436 aa21.8■■□□□ 1.08
POLE-212ENST00000539215 CEP170Q5SW79 1584 aa21.8■■□□□ 1.08
POLE-212ENST00000539215 SHROOM2Q13796 1616 aa21.7■■□□□ 1.06
POLE-212ENST00000539215 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
POLE-212ENST00000539215 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
POLE-212ENST00000539215 CUL7Q14999 1698 aa21.62■■□□□ 1.05
POLE-212ENST00000539215 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
POLE-212ENST00000539215 IGF1RP08069 1367 aa21.61■■□□□ 1.05
POLE-212ENST00000539215 TRHP20396 242 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms