RNA–Protein interactions for RNA: ENST00000539128.5

CYB561A3-212, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-212ENST00000539128 NISCHQ9Y2I1 1504 aa26.66■■□□□ 1.86
CYB561A3-212ENST00000539128 ABCC9O60706 1549 aa24.11■■□□□ 1.45
CYB561A3-212ENST00000539128 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
CYB561A3-212ENST00000539128 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
CYB561A3-212ENST00000539128 RB1CC1Q8TDY2 1594 aa22.73■■□□□ 1.23
CYB561A3-212ENST00000539128 NACADO15069 1562 aa22.46■■□□□ 1.19
CYB561A3-212ENST00000539128 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
CYB561A3-212ENST00000539128 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
CYB561A3-212ENST00000539128 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
CYB561A3-212ENST00000539128 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
CYB561A3-212ENST00000539128 MYO15BQ96JP2 1530 aa22.17■■□□□ 1.14
CYB561A3-212ENST00000539128 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
CYB561A3-212ENST00000539128 DCAF1Q9Y4B6 1507 aa22.07■■□□□ 1.12
CYB561A3-212ENST00000539128 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
CYB561A3-212ENST00000539128 CC2D2AQ9P2K1 1620 aa21.75■■□□□ 1.07
CYB561A3-212ENST00000539128 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
CYB561A3-212ENST00000539128 SCRIBQ14160 1630 aa21.59■■□□□ 1.05
CYB561A3-212ENST00000539128 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
CYB561A3-212ENST00000539128 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
CYB561A3-212ENST00000539128 CUX2O14529 1486 aa20.95■□□□□ 0.94
CYB561A3-212ENST00000539128 ERCC6Q03468 1493 aa20.86■□□□□ 0.93
CYB561A3-212ENST00000539128 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
CYB561A3-212ENST00000539128 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
CYB561A3-212ENST00000539128 SMARCA4P51532 1647 aa20.65■□□□□ 0.9
CYB561A3-212ENST00000539128 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
CYB561A3-212ENST00000539128 NESP48681 1621 aa20.59■□□□□ 0.89
CYB561A3-212ENST00000539128 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
CYB561A3-212ENST00000539128 HMGXB3Q12766 1538 aa20.55■□□□□ 0.88
CYB561A3-212ENST00000539128 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
CYB561A3-212ENST00000539128 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
CYB561A3-212ENST00000539128 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
CYB561A3-212ENST00000539128 BAZ1BQ9UIG0 1483 aaKnown RBP20.44■□□□□ 0.86
CYB561A3-212ENST00000539128 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
CYB561A3-212ENST00000539128 RSF1Q96T23 1441 aaPredicted RBP20.35■□□□□ 0.85
CYB561A3-212ENST00000539128 LAMC3Q9Y6N6 1575 aa20.34■□□□□ 0.85
CYB561A3-212ENST00000539128 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
CYB561A3-212ENST00000539128 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
CYB561A3-212ENST00000539128 WIZO95785 1651 aa20.26■□□□□ 0.83
CYB561A3-212ENST00000539128 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
CYB561A3-212ENST00000539128 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
CYB561A3-212ENST00000539128 CADPSQ9ULU8 1353 aa20.1■□□□□ 0.81
CYB561A3-212ENST00000539128 WDR62O43379 1518 aa20.07■□□□□ 0.8
CYB561A3-212ENST00000539128 SUPT5HO00267 1087 aaKnown RBP19.97■□□□□ 0.79
CYB561A3-212ENST00000539128 CEP164Q9UPV0 1460 aa19.94■□□□□ 0.78
CYB561A3-212ENST00000539128 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
CYB561A3-212ENST00000539128 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
CYB561A3-212ENST00000539128 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
CYB561A3-212ENST00000539128 CFTRP13569 1480 aa19.86■□□□□ 0.77
CYB561A3-212ENST00000539128 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
CYB561A3-212ENST00000539128 RIMBP3CA6NJZ7 1639 aa19.72■□□□□ 0.75
CYB561A3-212ENST00000539128 RIMBP3BA6NNM3 1639 aa19.72■□□□□ 0.75
CYB561A3-212ENST00000539128 RIMBP3Q9UFD9 1639 aa19.72■□□□□ 0.75
CYB561A3-212ENST00000539128 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
CYB561A3-212ENST00000539128 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
CYB561A3-212ENST00000539128 PRDM2Q13029 1718 aa19.58■□□□□ 0.72
CYB561A3-212ENST00000539128 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
CYB561A3-212ENST00000539128 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
CYB561A3-212ENST00000539128 CYB5RLQ6IPT4 315 aa19.5■□□□□ 0.71
CYB561A3-212ENST00000539128 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
CYB561A3-212ENST00000539128 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
CYB561A3-212ENST00000539128 TRHP20396 242 aaPredicted RBP19.43■□□□□ 0.7
CYB561A3-212ENST00000539128 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
CYB561A3-212ENST00000539128 DNMBPQ6XZF7 1577 aa19.39■□□□□ 0.69
CYB561A3-212ENST00000539128 CHD1O14646 1710 aa19.37■□□□□ 0.69
CYB561A3-212ENST00000539128 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
CYB561A3-212ENST00000539128 FBLN2P98095 1184 aa19.33■□□□□ 0.68
CYB561A3-212ENST00000539128 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
CYB561A3-212ENST00000539128 POLA1P09884 1462 aaPredicted RBP19.25■□□□□ 0.67
CYB561A3-212ENST00000539128 CUX1P39880 1505 aa19.25■□□□□ 0.67
CYB561A3-212ENST00000539128 SOGA1O94964 1423 aa19.25■□□□□ 0.67
CYB561A3-212ENST00000539128 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
CYB561A3-212ENST00000539128 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
CYB561A3-212ENST00000539128 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
CYB561A3-212ENST00000539128 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
CYB561A3-212ENST00000539128 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
CYB561A3-212ENST00000539128 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
CYB561A3-212ENST00000539128 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
CYB561A3-212ENST00000539128 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
CYB561A3-212ENST00000539128 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
CYB561A3-212ENST00000539128 SYNJ1O43426 1573 aa19.09■□□□□ 0.65
CYB561A3-212ENST00000539128 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
CYB561A3-212ENST00000539128 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
CYB561A3-212ENST00000539128 MAGI1Q96QZ7 1491 aaPredicted RBP19.05■□□□□ 0.64
CYB561A3-212ENST00000539128 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
CYB561A3-212ENST00000539128 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
CYB561A3-212ENST00000539128 SYNJ2O15056 1496 aa19■□□□□ 0.63
CYB561A3-212ENST00000539128 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
CYB561A3-212ENST00000539128 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.62
CYB561A3-212ENST00000539128 PBRM1Q86U86 1689 aa18.89■□□□□ 0.61
CYB561A3-212ENST00000539128 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
CYB561A3-212ENST00000539128 ERCC6L2Q5T890 1561 aa18.83■□□□□ 0.6
CYB561A3-212ENST00000539128 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
CYB561A3-212ENST00000539128 FHAD1B1AJZ9 1412 aa18.81■□□□□ 0.6
CYB561A3-212ENST00000539128 GRIN2AQ12879 1464 aa18.77■□□□□ 0.6
CYB561A3-212ENST00000539128 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
CYB561A3-212ENST00000539128 ADAMTS12P58397 1594 aa18.73■□□□□ 0.59
CYB561A3-212ENST00000539128 IGF1RP08069 1367 aa18.73■□□□□ 0.59
CYB561A3-212ENST00000539128 NUP160Q12769 1436 aa18.72■□□□□ 0.59
CYB561A3-212ENST00000539128 SHROOM2Q13796 1616 aa18.68■□□□□ 0.58
CYB561A3-212ENST00000539128 KIF13AQ9H1H9 1805 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms