RNA–Protein interactions for RNA: ENST00000538753.5

COPS7A-209, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-209ENST00000538753 NISCHQ9Y2I1 1504 aa36.05■■■■□ 3.36
COPS7A-209ENST00000538753 CCDC180Q9P1Z9 1646 aa32.35■■■□□ 2.77
COPS7A-209ENST00000538753 ABCC9O60706 1549 aa31.99■■■□□ 2.71
COPS7A-209ENST00000538753 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
COPS7A-209ENST00000538753 NACADO15069 1562 aa30.46■■■□□ 2.47
COPS7A-209ENST00000538753 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
COPS7A-209ENST00000538753 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
COPS7A-209ENST00000538753 UNC13AQ9UPW8 1703 aa30.09■■■□□ 2.41
COPS7A-209ENST00000538753 ZCCHC6Q5VYS8 1495 aaKnown RBP29.92■■■□□ 2.38
COPS7A-209ENST00000538753 DCAF1Q9Y4B6 1507 aa29.81■■■□□ 2.36
COPS7A-209ENST00000538753 PABPN1Q86U42 306 aaKnown RBP eCLIP29.78■■■□□ 2.36
COPS7A-209ENST00000538753 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
COPS7A-209ENST00000538753 BICRAQ9NZM4 1560 aa29.72■■■□□ 2.35
COPS7A-209ENST00000538753 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
COPS7A-209ENST00000538753 SHROOM4Q9ULL8 1493 aa29.33■■■□□ 2.29
COPS7A-209ENST00000538753 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
COPS7A-209ENST00000538753 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
COPS7A-209ENST00000538753 CECR2Q9BXF3 1484 aa28.79■■■□□ 2.2
COPS7A-209ENST00000538753 SMARCA4P51532 1647 aa28.11■■■□□ 2.09
COPS7A-209ENST00000538753 NCAPD3P42695 1498 aa28.08■■■□□ 2.09
COPS7A-209ENST00000538753 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
COPS7A-209ENST00000538753 SMARCA2P51531 1590 aa28■■■□□ 2.07
COPS7A-209ENST00000538753 BAZ1AQ9NRL2 1556 aaPredicted RBP27.99■■■□□ 2.07
COPS7A-209ENST00000538753 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
COPS7A-209ENST00000538753 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
COPS7A-209ENST00000538753 MROH2BQ7Z745 1585 aa27.77■■■□□ 2.04
COPS7A-209ENST00000538753 BAZ1BQ9UIG0 1483 aaKnown RBP27.77■■■□□ 2.04
COPS7A-209ENST00000538753 ERCC6Q03468 1493 aa27.61■■■□□ 2.01
COPS7A-209ENST00000538753 NESP48681 1621 aa27.56■■■□□ 2
COPS7A-209ENST00000538753 WIZO95785 1651 aa27.51■■□□□ 1.99
COPS7A-209ENST00000538753 CUX2O14529 1486 aa27.51■■□□□ 1.99
COPS7A-209ENST00000538753 LAMC3Q9Y6N6 1575 aa27.47■■□□□ 1.99
COPS7A-209ENST00000538753 KIF21AQ7Z4S6 1674 aa27.34■■□□□ 1.97
COPS7A-209ENST00000538753 THOC2Q8NI27 1593 aaKnown RBP27.3■■□□□ 1.96
COPS7A-209ENST00000538753 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.95
COPS7A-209ENST00000538753 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
COPS7A-209ENST00000538753 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
COPS7A-209ENST00000538753 DNAJC5Q9H3Z4 198 aa27.19■■□□□ 1.94
COPS7A-209ENST00000538753 TOP2AP11388 1531 aaKnown RBP27.14■■□□□ 1.94
COPS7A-209ENST00000538753 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
COPS7A-209ENST00000538753 CFTRP13569 1480 aa26.98■■□□□ 1.91
COPS7A-209ENST00000538753 WDR62O43379 1518 aa26.95■■□□□ 1.9
COPS7A-209ENST00000538753 CEP164Q9UPV0 1460 aa26.94■■□□□ 1.9
COPS7A-209ENST00000538753 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
COPS7A-209ENST00000538753 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
COPS7A-209ENST00000538753 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
COPS7A-209ENST00000538753 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.86
COPS7A-209ENST00000538753 TOPBP1Q92547 1522 aa26.45■■□□□ 1.83
COPS7A-209ENST00000538753 ABCC8Q09428 1581 aa26.43■■□□□ 1.82
COPS7A-209ENST00000538753 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
COPS7A-209ENST00000538753 IFT140Q96RY7 1462 aa26.38■■□□□ 1.81
COPS7A-209ENST00000538753 ZNF608Q9ULD9 1512 aaPredicted RBP26.31■■□□□ 1.8
COPS7A-209ENST00000538753 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
COPS7A-209ENST00000538753 OSCARQ8IYS5 282 aa26.25■■□□□ 1.79
COPS7A-209ENST00000538753 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
COPS7A-209ENST00000538753 SUPT5HO00267 1087 aaKnown RBP26.19■■□□□ 1.78
COPS7A-209ENST00000538753 POLA1P09884 1462 aaPredicted RBP26.18■■□□□ 1.78
COPS7A-209ENST00000538753 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.77
COPS7A-209ENST00000538753 CUX1P39880 1505 aa26.09■■□□□ 1.77
COPS7A-209ENST00000538753 CHD1O14646 1710 aa26.08■■□□□ 1.76
COPS7A-209ENST00000538753 RAD54L2Q9Y4B4 1467 aa26.07■■□□□ 1.76
COPS7A-209ENST00000538753 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
COPS7A-209ENST00000538753 SOGA1O94964 1423 aa26.06■■□□□ 1.76
COPS7A-209ENST00000538753 FGD5Q6ZNL6 1462 aa26.06■■□□□ 1.76
COPS7A-209ENST00000538753 WDR97A6NE52 1622 aa26.01■■□□□ 1.75
COPS7A-209ENST00000538753 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
COPS7A-209ENST00000538753 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
COPS7A-209ENST00000538753 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
COPS7A-209ENST00000538753 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.75
COPS7A-209ENST00000538753 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
COPS7A-209ENST00000538753 FBLN2P98095 1184 aa25.86■■□□□ 1.73
COPS7A-209ENST00000538753 ARHGEF11O15085 1522 aa25.86■■□□□ 1.73
COPS7A-209ENST00000538753 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
COPS7A-209ENST00000538753 GRIN2BQ13224 1484 aa25.82■■□□□ 1.72
COPS7A-209ENST00000538753 MAGI1Q96QZ7 1491 aaPredicted RBP25.81■■□□□ 1.72
COPS7A-209ENST00000538753 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
COPS7A-209ENST00000538753 ABCA10Q8WWZ4 1543 aa25.79■■□□□ 1.72
COPS7A-209ENST00000538753 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
COPS7A-209ENST00000538753 GAPVD1Q14C86 1478 aa25.77■■□□□ 1.72
COPS7A-209ENST00000538753 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
COPS7A-209ENST00000538753 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
COPS7A-209ENST00000538753 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
COPS7A-209ENST00000538753 SYNJ2O15056 1496 aa25.72■■□□□ 1.71
COPS7A-209ENST00000538753 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.71
COPS7A-209ENST00000538753 CLASP1Q7Z460 1538 aa25.69■■□□□ 1.7
COPS7A-209ENST00000538753 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
COPS7A-209ENST00000538753 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
COPS7A-209ENST00000538753 ADAMTS12P58397 1594 aa25.54■■□□□ 1.68
COPS7A-209ENST00000538753 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
COPS7A-209ENST00000538753 GRIN2AQ12879 1464 aa25.49■■□□□ 1.67
COPS7A-209ENST00000538753 FHAD1B1AJZ9 1412 aa25.44■■□□□ 1.66
COPS7A-209ENST00000538753 CEP170Q5SW79 1584 aa25.42■■□□□ 1.66
COPS7A-209ENST00000538753 NUP160Q12769 1436 aa25.38■■□□□ 1.65
COPS7A-209ENST00000538753 SHROOM2Q13796 1616 aa25.33■■□□□ 1.65
COPS7A-209ENST00000538753 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
COPS7A-209ENST00000538753 TRHP20396 242 aaPredicted RBP25.25■■□□□ 1.63
COPS7A-209ENST00000538753 KIF27Q86VH2 1401 aa25.21■■□□□ 1.63
COPS7A-209ENST00000538753 CUL7Q14999 1698 aa25.21■■□□□ 1.63
COPS7A-209ENST00000538753 RUSC2Q8N2Y8 1516 aa25.18■■□□□ 1.62
COPS7A-209ENST00000538753 IGF1RP08069 1367 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms