RNA–Protein interactions for RNA: ENST00000538600.1

NCAPD2-206, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 3

Gene NCAPD2, Length 290 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-206ENST00000538600 NISCHQ9Y2I1 1504 aa23.27■■□□□ 1.32
NCAPD2-206ENST00000538600 ABCC9O60706 1549 aa21.2■□□□□ 0.98
NCAPD2-206ENST00000538600 CCDC180Q9P1Z9 1646 aa21.09■□□□□ 0.97
NCAPD2-206ENST00000538600 DNAJC5BQ9UF47 199 aa20.06■□□□□ 0.8
NCAPD2-206ENST00000538600 RB1CC1Q8TDY2 1594 aa20.05■□□□□ 0.8
NCAPD2-206ENST00000538600 UNC13AQ9UPW8 1703 aa19.98■□□□□ 0.79
NCAPD2-206ENST00000538600 NACADO15069 1562 aa19.83■□□□□ 0.77
NCAPD2-206ENST00000538600 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.73
NCAPD2-206ENST00000538600 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
NCAPD2-206ENST00000538600 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
NCAPD2-206ENST00000538600 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
NCAPD2-206ENST00000538600 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
NCAPD2-206ENST00000538600 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
NCAPD2-206ENST00000538600 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
NCAPD2-206ENST00000538600 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
NCAPD2-206ENST00000538600 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
NCAPD2-206ENST00000538600 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
NCAPD2-206ENST00000538600 CECR2Q9BXF3 1484 aa19.05■□□□□ 0.64
NCAPD2-206ENST00000538600 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
NCAPD2-206ENST00000538600 SMARCA4P51532 1647 aa18.29■□□□□ 0.52
NCAPD2-206ENST00000538600 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
NCAPD2-206ENST00000538600 CUX2O14529 1486 aa18.25■□□□□ 0.51
NCAPD2-206ENST00000538600 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
NCAPD2-206ENST00000538600 NESP48681 1621 aa18.22■□□□□ 0.51
NCAPD2-206ENST00000538600 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
NCAPD2-206ENST00000538600 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
NCAPD2-206ENST00000538600 SMARCA2P51531 1590 aa18.16■□□□□ 0.5
NCAPD2-206ENST00000538600 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
NCAPD2-206ENST00000538600 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
NCAPD2-206ENST00000538600 PEG3Q9GZU2 1588 aa18.06■□□□□ 0.48
NCAPD2-206ENST00000538600 BAZ1AQ9NRL2 1556 aaPredicted RBP18.05■□□□□ 0.48
NCAPD2-206ENST00000538600 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
NCAPD2-206ENST00000538600 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
NCAPD2-206ENST00000538600 LAMC3Q9Y6N6 1575 aa17.97■□□□□ 0.47
NCAPD2-206ENST00000538600 WIZO95785 1651 aa17.87■□□□□ 0.45
NCAPD2-206ENST00000538600 WDR62O43379 1518 aa17.74■□□□□ 0.43
NCAPD2-206ENST00000538600 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
NCAPD2-206ENST00000538600 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
NCAPD2-206ENST00000538600 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
NCAPD2-206ENST00000538600 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
NCAPD2-206ENST00000538600 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
NCAPD2-206ENST00000538600 TRIM41Q8WV44 630 aa17.56■□□□□ 0.4
NCAPD2-206ENST00000538600 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
NCAPD2-206ENST00000538600 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
NCAPD2-206ENST00000538600 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
NCAPD2-206ENST00000538600 CFTRP13569 1480 aa17.49■□□□□ 0.39
NCAPD2-206ENST00000538600 RSF1Q96T23 1441 aaPredicted RBP17.45■□□□□ 0.38
NCAPD2-206ENST00000538600 RIMBP3CA6NJZ7 1639 aa17.38■□□□□ 0.37
NCAPD2-206ENST00000538600 RIMBP3BA6NNM3 1639 aa17.38■□□□□ 0.37
NCAPD2-206ENST00000538600 RIMBP3Q9UFD9 1639 aa17.38■□□□□ 0.37
NCAPD2-206ENST00000538600 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
NCAPD2-206ENST00000538600 CHD1O14646 1710 aa17.31■□□□□ 0.36
NCAPD2-206ENST00000538600 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
NCAPD2-206ENST00000538600 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
NCAPD2-206ENST00000538600 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
NCAPD2-206ENST00000538600 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
NCAPD2-206ENST00000538600 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
NCAPD2-206ENST00000538600 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
NCAPD2-206ENST00000538600 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
NCAPD2-206ENST00000538600 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
NCAPD2-206ENST00000538600 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.32
NCAPD2-206ENST00000538600 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
NCAPD2-206ENST00000538600 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
NCAPD2-206ENST00000538600 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
NCAPD2-206ENST00000538600 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
NCAPD2-206ENST00000538600 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
NCAPD2-206ENST00000538600 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
NCAPD2-206ENST00000538600 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.3
NCAPD2-206ENST00000538600 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
NCAPD2-206ENST00000538600 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
NCAPD2-206ENST00000538600 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
NCAPD2-206ENST00000538600 CUX1P39880 1505 aa16.92■□□□□ 0.3
NCAPD2-206ENST00000538600 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
NCAPD2-206ENST00000538600 SOGA1O94964 1423 aa16.86■□□□□ 0.29
NCAPD2-206ENST00000538600 FBLN2P98095 1184 aa16.85■□□□□ 0.29
NCAPD2-206ENST00000538600 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
NCAPD2-206ENST00000538600 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
NCAPD2-206ENST00000538600 MAGI1Q96QZ7 1491 aaPredicted RBP16.79■□□□□ 0.28
NCAPD2-206ENST00000538600 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
NCAPD2-206ENST00000538600 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.27
NCAPD2-206ENST00000538600 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
NCAPD2-206ENST00000538600 SYNJ2O15056 1496 aa16.74■□□□□ 0.27
NCAPD2-206ENST00000538600 GAPVD1Q14C86 1478 aa16.69■□□□□ 0.26
NCAPD2-206ENST00000538600 ADAMTS12P58397 1594 aa16.68■□□□□ 0.26
NCAPD2-206ENST00000538600 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
NCAPD2-206ENST00000538600 ABCA10Q8WWZ4 1543 aa16.67■□□□□ 0.26
NCAPD2-206ENST00000538600 KIF13AQ9H1H9 1805 aa16.66■□□□□ 0.26
NCAPD2-206ENST00000538600 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
NCAPD2-206ENST00000538600 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
NCAPD2-206ENST00000538600 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
NCAPD2-206ENST00000538600 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
NCAPD2-206ENST00000538600 TOP2BQ02880 1626 aa16.58■□□□□ 0.24
NCAPD2-206ENST00000538600 NUP160Q12769 1436 aa16.54■□□□□ 0.24
NCAPD2-206ENST00000538600 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
NCAPD2-206ENST00000538600 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
NCAPD2-206ENST00000538600 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
NCAPD2-206ENST00000538600 SUPT5HO00267 1087 aaKnown RBP16.43■□□□□ 0.22
NCAPD2-206ENST00000538600 FHAD1B1AJZ9 1412 aa16.43■□□□□ 0.22
NCAPD2-206ENST00000538600 TSPOAP1O95153 1857 aa16.39■□□□□ 0.22
NCAPD2-206ENST00000538600 ADCY10Q96PN6 1610 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 402 ms