RNA–Protein interactions for RNA: ENST00000538379.5

KDM2B-208, Transcript of lysine demethylase 2B, humanhuman

TSL 4

Gene KDM2B, Length 574 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-208ENST00000538379 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
KDM2B-208ENST00000538379 CCDC180Q9P1Z9 1646 aa17.04■□□□□ 0.32
KDM2B-208ENST00000538379 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
KDM2B-208ENST00000538379 ABCC9O60706 1549 aa16.2■□□□□ 0.18
KDM2B-208ENST00000538379 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
KDM2B-208ENST00000538379 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
KDM2B-208ENST00000538379 DCAF8L2P0C7V8 631 aa16.04■□□□□ 0.16
KDM2B-208ENST00000538379 NACADO15069 1562 aa15.96■□□□□ 0.15
KDM2B-208ENST00000538379 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
KDM2B-208ENST00000538379 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
KDM2B-208ENST00000538379 SCRIBQ14160 1630 aa15.52■□□□□ 0.08
KDM2B-208ENST00000538379 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
KDM2B-208ENST00000538379 UNC13AQ9UPW8 1703 aa15.39■□□□□ 0.05
KDM2B-208ENST00000538379 BICRAQ9NZM4 1560 aa15.3■□□□□ 0.04
KDM2B-208ENST00000538379 PABPN1Q86U42 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
KDM2B-208ENST00000538379 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
KDM2B-208ENST00000538379 BAZ1AQ9NRL2 1556 aaPredicted RBP15.02■□□□□ -0
KDM2B-208ENST00000538379 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
KDM2B-208ENST00000538379 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
KDM2B-208ENST00000538379 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
KDM2B-208ENST00000538379 SUPT5HO00267 1087 aaKnown RBP14.92□□□□□ -0.02
KDM2B-208ENST00000538379 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
KDM2B-208ENST00000538379 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.04
KDM2B-208ENST00000538379 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
KDM2B-208ENST00000538379 WIZO95785 1651 aa14.77□□□□□ -0.04
KDM2B-208ENST00000538379 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.04
KDM2B-208ENST00000538379 NCAPD3P42695 1498 aa14.74□□□□□ -0.05
KDM2B-208ENST00000538379 CC2D2AQ9P2K1 1620 aa14.69□□□□□ -0.06
KDM2B-208ENST00000538379 TOP2AP11388 1531 aaKnown RBP14.68□□□□□ -0.06
KDM2B-208ENST00000538379 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
KDM2B-208ENST00000538379 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
KDM2B-208ENST00000538379 DNAJC5Q9H3Z4 198 aa14.63□□□□□ -0.07
KDM2B-208ENST00000538379 CCDC88BA6NC98 1476 aa14.53□□□□□ -0.08
KDM2B-208ENST00000538379 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
KDM2B-208ENST00000538379 CFTRP13569 1480 aa14.32□□□□□ -0.12
KDM2B-208ENST00000538379 LAMC3Q9Y6N6 1575 aa14.25□□□□□ -0.13
KDM2B-208ENST00000538379 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
KDM2B-208ENST00000538379 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
KDM2B-208ENST00000538379 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
KDM2B-208ENST00000538379 NESP48681 1621 aa14.14□□□□□ -0.15
KDM2B-208ENST00000538379 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
KDM2B-208ENST00000538379 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
KDM2B-208ENST00000538379 WRNQ14191 1432 aaPredicted RBP eCLIP14.1□□□□□ -0.15
KDM2B-208ENST00000538379 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
KDM2B-208ENST00000538379 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
KDM2B-208ENST00000538379 TOP2BQ02880 1626 aa14.01□□□□□ -0.17
KDM2B-208ENST00000538379 BIVM-ERCC5R4GMW8 1640 aa13.99□□□□□ -0.17
KDM2B-208ENST00000538379 CUX1P39880 1505 aa13.98□□□□□ -0.17
KDM2B-208ENST00000538379 SYNJ1O43426 1573 aa13.97□□□□□ -0.17
KDM2B-208ENST00000538379 KIF21AQ7Z4S6 1674 aa13.97□□□□□ -0.17
KDM2B-208ENST00000538379 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.18
KDM2B-208ENST00000538379 ERCC6Q03468 1493 aa13.95□□□□□ -0.18
KDM2B-208ENST00000538379 MRC2Q9UBG0 1479 aa13.94□□□□□ -0.18
KDM2B-208ENST00000538379 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
KDM2B-208ENST00000538379 URB2Q14146 1524 aaKnown RBP13.92□□□□□ -0.18
KDM2B-208ENST00000538379 EEA1Q15075 1411 aa13.88□□□□□ -0.19
KDM2B-208ENST00000538379 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
KDM2B-208ENST00000538379 WDR62O43379 1518 aa13.87□□□□□ -0.19
KDM2B-208ENST00000538379 SOGA1O94964 1423 aa13.85□□□□□ -0.19
KDM2B-208ENST00000538379 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
KDM2B-208ENST00000538379 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.2
KDM2B-208ENST00000538379 CUX2O14529 1486 aa13.81□□□□□ -0.2
KDM2B-208ENST00000538379 KIF27Q86VH2 1401 aa13.8□□□□□ -0.2
KDM2B-208ENST00000538379 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
KDM2B-208ENST00000538379 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
KDM2B-208ENST00000538379 IFT140Q96RY7 1462 aa13.77□□□□□ -0.21
KDM2B-208ENST00000538379 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
KDM2B-208ENST00000538379 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
KDM2B-208ENST00000538379 TARBP1Q13395 1621 aaKnown RBP13.74□□□□□ -0.21
KDM2B-208ENST00000538379 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
KDM2B-208ENST00000538379 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
KDM2B-208ENST00000538379 IGF1RP08069 1367 aa13.69□□□□□ -0.22
KDM2B-208ENST00000538379 TDRD9Q8NDG6 1382 aaKnown RBP13.67□□□□□ -0.22
KDM2B-208ENST00000538379 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
KDM2B-208ENST00000538379 ABCA5Q8WWZ7 1642 aa13.65□□□□□ -0.22
KDM2B-208ENST00000538379 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
KDM2B-208ENST00000538379 PRXQ9BXM0 1461 aa13.63□□□□□ -0.23
KDM2B-208ENST00000538379 KIF21BO75037 1637 aa13.62□□□□□ -0.23
KDM2B-208ENST00000538379 LOC105371045A0A1W2PR82 267 aa13.62□□□□□ -0.23
KDM2B-208ENST00000538379 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.23
KDM2B-208ENST00000538379 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
KDM2B-208ENST00000538379 CARMIL1Q5VZK9 1371 aa13.61□□□□□ -0.23
KDM2B-208ENST00000538379 ZNF608Q9ULD9 1512 aaPredicted RBP13.6□□□□□ -0.23
KDM2B-208ENST00000538379 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
KDM2B-208ENST00000538379 CUL7Q14999 1698 aa13.59□□□□□ -0.23
KDM2B-208ENST00000538379 RAPGEF2Q9Y4G8 1499 aa13.57□□□□□ -0.24
KDM2B-208ENST00000538379 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
KDM2B-208ENST00000538379 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
KDM2B-208ENST00000538379 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
KDM2B-208ENST00000538379 PBRM1Q86U86 1689 aa13.54□□□□□ -0.24
KDM2B-208ENST00000538379 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
KDM2B-208ENST00000538379 MAGI1Q96QZ7 1491 aaPredicted RBP13.53□□□□□ -0.24
KDM2B-208ENST00000538379 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
KDM2B-208ENST00000538379 ADAMTS12P58397 1594 aa13.48□□□□□ -0.25
KDM2B-208ENST00000538379 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
KDM2B-208ENST00000538379 SYNJ2O15056 1496 aa13.47□□□□□ -0.25
KDM2B-208ENST00000538379 CHMP7Q8WUX9 453 aaPredicted RBP13.46□□□□□ -0.25
KDM2B-208ENST00000538379 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
KDM2B-208ENST00000538379 FBLN2P98095 1184 aa13.38□□□□□ -0.27
KDM2B-208ENST00000538379 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms