RNA–Protein interactions for RNA: ENST00000537955.1

DENR-203, Transcript of density regulated re-initiation and release factor, humanhuman

TSL 2

Gene DENR, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENR-203ENST00000537955 NISCHQ9Y2I1 1504 aa54.3■■■■■ 6.28
DENR-203ENST00000537955 CCDC180Q9P1Z9 1646 aa48.32■■■■■ 5.33
DENR-203ENST00000537955 ABCC9O60706 1549 aa46.91■■■■■ 5.1
DENR-203ENST00000537955 NACADO15069 1562 aa45.33■■■■■ 4.85
DENR-203ENST00000537955 ZCCHC6Q5VYS8 1495 aaKnown RBP45.33■■■■■ 4.85
DENR-203ENST00000537955 RB1CC1Q8TDY2 1594 aa45.33■■■■■ 4.85
DENR-203ENST00000537955 MYO15BQ96JP2 1530 aa45.18■■■■■ 4.82
DENR-203ENST00000537955 DCAF1Q9Y4B6 1507 aa45.03■■■■■ 4.8
DENR-203ENST00000537955 DCAF8L2P0C7V8 631 aa45.03■■■■■ 4.8
DENR-203ENST00000537955 UNC13AQ9UPW8 1703 aa44.29■■■■■ 4.68
DENR-203ENST00000537955 SCRIBQ14160 1630 aa43.99■■■■■ 4.63
DENR-203ENST00000537955 BICRAQ9NZM4 1560 aa43.92■■■■■ 4.62
DENR-203ENST00000537955 PABPN1Q86U42 306 aaKnown RBP eCLIP43.76■■■■■ 4.6
DENR-203ENST00000537955 SHROOM4Q9ULL8 1493 aa43.63■■■■■ 4.57
DENR-203ENST00000537955 DNAJC5BQ9UF47 199 aa42.77■■■■■ 4.44
DENR-203ENST00000537955 EIF4G1Q04637 1599 aaKnown RBP42.76■■■■■ 4.44
DENR-203ENST00000537955 CC2D2AQ9P2K1 1620 aa42.51■■■■■ 4.4
DENR-203ENST00000537955 CECR2Q9BXF3 1484 aa42.21■■■■■ 4.35
DENR-203ENST00000537955 SMARCA4P51532 1647 aa42.13■■■■■ 4.34
DENR-203ENST00000537955 BAZ1AQ9NRL2 1556 aaPredicted RBP42.12■■■■■ 4.33
DENR-203ENST00000537955 SMARCA2P51531 1590 aa41.84■■■■■ 4.29
DENR-203ENST00000537955 MROH2BQ7Z745 1585 aa41.82■■■■■ 4.29
DENR-203ENST00000537955 ATAD2BQ9ULI0 1458 aa41.81■■■■■ 4.28
DENR-203ENST00000537955 NCAPD3P42695 1498 aa41.78■■■■■ 4.28
DENR-203ENST00000537955 PEG3Q9GZU2 1588 aa41.77■■■■■ 4.28
DENR-203ENST00000537955 HMGXB3Q12766 1538 aa41.68■■■■■ 4.26
DENR-203ENST00000537955 BAZ1BQ9UIG0 1483 aaKnown RBP41.5■■■■■ 4.23
DENR-203ENST00000537955 RSF1Q96T23 1441 aaPredicted RBP41.39■■■■■ 4.22
DENR-203ENST00000537955 WIZO95785 1651 aa41.38■■■■■ 4.21
DENR-203ENST00000537955 TOP2AP11388 1531 aaKnown RBP41.03■■■■■ 4.16
DENR-203ENST00000537955 LAMC3Q9Y6N6 1575 aa40.69■■■■■ 4.11
DENR-203ENST00000537955 NESP48681 1621 aa40.65■■■■■ 4.1
DENR-203ENST00000537955 CADPSQ9ULU8 1353 aa40.53■■■■■ 4.08
DENR-203ENST00000537955 ERCC6Q03468 1493 aa40.46■■■■■ 4.07
DENR-203ENST00000537955 CCDC88BA6NC98 1476 aa40.45■■■■■ 4.07
DENR-203ENST00000537955 CFTRP13569 1480 aa40.38■■■■■ 4.05
DENR-203ENST00000537955 PDS5BQ9NTI5 1447 aa40.35■■■■■ 4.05
DENR-203ENST00000537955 SUPT5HO00267 1087 aaKnown RBP40.3■■■■■ 4.04
DENR-203ENST00000537955 KIF21AQ7Z4S6 1674 aa40.25■■■■■ 4.03
DENR-203ENST00000537955 PRDM2Q13029 1718 aa40.19■■■■■ 4.02
DENR-203ENST00000537955 THOC2Q8NI27 1593 aaKnown RBP40.13■■■■■ 4.01
DENR-203ENST00000537955 FANCD2Q9BXW9 1451 aa40.09■■■■■ 4.01
DENR-203ENST00000537955 CUX2O14529 1486 aa40.05■■■■■ 4
DENR-203ENST00000537955 CEP164Q9UPV0 1460 aa40.05■■■■■ 4
DENR-203ENST00000537955 MRC2Q9UBG0 1479 aa39.96■■■■□ 3.99
DENR-203ENST00000537955 WDR62O43379 1518 aa39.86■■■■□ 3.97
DENR-203ENST00000537955 URB2Q14146 1524 aaKnown RBP39.68■■■■□ 3.94
DENR-203ENST00000537955 ABCC8Q09428 1581 aa39.52■■■■□ 3.92
DENR-203ENST00000537955 DNMBPQ6XZF7 1577 aa39.5■■■■□ 3.91
DENR-203ENST00000537955 TOPBP1Q92547 1522 aa39.49■■■■□ 3.91
DENR-203ENST00000537955 CUX1P39880 1505 aa39.24■■■■□ 3.87
DENR-203ENST00000537955 IFT140Q96RY7 1462 aa39.21■■■■□ 3.87
DENR-203ENST00000537955 POLA1P09884 1462 aaPredicted RBP39.16■■■■□ 3.86
DENR-203ENST00000537955 FGD5Q6ZNL6 1462 aa39.09■■■■□ 3.85
DENR-203ENST00000537955 TARBP1Q13395 1621 aaKnown RBP39.07■■■■□ 3.84
DENR-203ENST00000537955 WRNQ14191 1432 aaPredicted RBP eCLIP39.05■■■■□ 3.84
DENR-203ENST00000537955 BIVM-ERCC5R4GMW8 1640 aa39.02■■■■□ 3.84
DENR-203ENST00000537955 TOP2BQ02880 1626 aa39■■■■□ 3.83
DENR-203ENST00000537955 SYNJ1O43426 1573 aa38.96■■■■□ 3.83
DENR-203ENST00000537955 ZNF608Q9ULD9 1512 aaPredicted RBP38.94■■■■□ 3.82
DENR-203ENST00000537955 SOGA1O94964 1423 aa38.93■■■■□ 3.82
DENR-203ENST00000537955 RAD54L2Q9Y4B4 1467 aa38.92■■■■□ 3.82
DENR-203ENST00000537955 EIF4G3O43432 1585 aaKnown RBP38.91■■■■□ 3.82
DENR-203ENST00000537955 WDR97A6NE52 1622 aa38.87■■■■□ 3.81
DENR-203ENST00000537955 ABCA10Q8WWZ4 1543 aa38.74■■■■□ 3.79
DENR-203ENST00000537955 AQRO60306 1485 aaKnown RBP eCLIP38.72■■■■□ 3.796e-9■■■■■ 45.1
DENR-203ENST00000537955 TDRD9Q8NDG6 1382 aaKnown RBP38.66■■■■□ 3.78
DENR-203ENST00000537955 ABCA5Q8WWZ7 1642 aa38.62■■■■□ 3.77
DENR-203ENST00000537955 GAPVD1Q14C86 1478 aa38.54■■■■□ 3.76
DENR-203ENST00000537955 GRIN2BQ13224 1484 aa38.53■■■■□ 3.76
DENR-203ENST00000537955 PBRM1Q86U86 1689 aa38.51■■■■□ 3.76
DENR-203ENST00000537955 DNAJC5Q9H3Z4 198 aa38.45■■■■□ 3.75
DENR-203ENST00000537955 MAGI1Q96QZ7 1491 aaPredicted RBP38.45■■■■□ 3.75
DENR-203ENST00000537955 SNAPC4Q5SXM2 1469 aa38.44■■■■□ 3.74
DENR-203ENST00000537955 CHD1O14646 1710 aa38.35■■■■□ 3.73
DENR-203ENST00000537955 ERICH3Q5RHP9 1530 aa38.31■■■■□ 3.72
DENR-203ENST00000537955 SYNJ2O15056 1496 aa38.27■■■■□ 3.72
DENR-203ENST00000537955 OSCARQ8IYS5 282 aa38.26■■■■□ 3.72
DENR-203ENST00000537955 ADAMTS12P58397 1594 aa38.24■■■■□ 3.71
DENR-203ENST00000537955 KIF27Q86VH2 1401 aa38.22■■■■□ 3.71
DENR-203ENST00000537955 FBLN2P98095 1184 aa38.12■■■■□ 3.69
DENR-203ENST00000537955 FHAD1B1AJZ9 1412 aa38.12■■■■□ 3.69
DENR-203ENST00000537955 CHMP7Q8WUX9 453 aaPredicted RBP38.11■■■■□ 3.69
DENR-203ENST00000537955 TRIM41Q8WV44 630 aa38.11■■■■□ 3.69
DENR-203ENST00000537955 GRIN2AQ12879 1464 aa38.04■■■■□ 3.68
DENR-203ENST00000537955 CUL7Q14999 1698 aa38.02■■■■□ 3.68
DENR-203ENST00000537955 CLASP1Q7Z460 1538 aa37.97■■■■□ 3.67
DENR-203ENST00000537955 IGF1RP08069 1367 aa37.97■■■■□ 3.67
DENR-203ENST00000537955 NUP160Q12769 1436 aa37.88■■■■□ 3.66
DENR-203ENST00000537955 CEP170Q5SW79 1584 aa37.85■■■■□ 3.65
DENR-203ENST00000537955 RUSC2Q8N2Y8 1516 aa37.83■■■■□ 3.65
DENR-203ENST00000537955 CARMIL1Q5VZK9 1371 aa37.77■■■■□ 3.64
DENR-203ENST00000537955 CHIC1Q5VXU3 224 aa37.76■■■■□ 3.64
DENR-203ENST00000537955 ARHGEF11O15085 1522 aa37.76■■■■□ 3.63
DENR-203ENST00000537955 RIMBP3CA6NJZ7 1639 aa37.74■■■■□ 3.63
DENR-203ENST00000537955 RIMBP3BA6NNM3 1639 aa37.74■■■■□ 3.63
DENR-203ENST00000537955 RIMBP3Q9UFD9 1639 aa37.74■■■■□ 3.63
DENR-203ENST00000537955 EEA1Q15075 1411 aa37.66■■■■□ 3.62
DENR-203ENST00000537955 RAPGEF2Q9Y4G8 1499 aa37.62■■■■□ 3.61
DENR-203ENST00000537955 SHROOM2Q13796 1616 aa37.61■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms