RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
PEX11B-203ENST00000537888 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
PEX11B-203ENST00000537888 ABCC9O60706 1549 aa26.82■■□□□ 1.88
PEX11B-203ENST00000537888 RB1CC1Q8TDY2 1594 aa25.73■■□□□ 1.71
PEX11B-203ENST00000537888 NACADO15069 1562 aa25.69■■□□□ 1.7
PEX11B-203ENST00000537888 MYO15BQ96JP2 1530 aa25.54■■□□□ 1.68
PEX11B-203ENST00000537888 ZCCHC6Q5VYS8 1495 aaKnown RBP25.51■■□□□ 1.67
PEX11B-203ENST00000537888 DCAF8L2P0C7V8 631 aa25.48■■□□□ 1.67
PEX11B-203ENST00000537888 DCAF1Q9Y4B6 1507 aa25.36■■□□□ 1.65
PEX11B-203ENST00000537888 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
PEX11B-203ENST00000537888 BICRAQ9NZM4 1560 aa25.03■■□□□ 1.6
PEX11B-203ENST00000537888 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
PEX11B-203ENST00000537888 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
PEX11B-203ENST00000537888 DNAJC5BQ9UF47 199 aa24.79■■□□□ 1.56
PEX11B-203ENST00000537888 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
PEX11B-203ENST00000537888 EIF4G1Q04637 1599 aaKnown RBP24.35■■□□□ 1.49
PEX11B-203ENST00000537888 CC2D2AQ9P2K1 1620 aa24.27■■□□□ 1.48
PEX11B-203ENST00000537888 CECR2Q9BXF3 1484 aa24.12■■□□□ 1.45
PEX11B-203ENST00000537888 SMARCA4P51532 1647 aa23.79■■□□□ 1.4
PEX11B-203ENST00000537888 NCAPD3P42695 1498 aa23.73■■□□□ 1.39
PEX11B-203ENST00000537888 BAZ1AQ9NRL2 1556 aaPredicted RBP23.73■■□□□ 1.39
PEX11B-203ENST00000537888 ATAD2BQ9ULI0 1458 aa23.71■■□□□ 1.39
PEX11B-203ENST00000537888 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
PEX11B-203ENST00000537888 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
PEX11B-203ENST00000537888 MROH2BQ7Z745 1585 aa23.6■■□□□ 1.37
PEX11B-203ENST00000537888 HMGXB3Q12766 1538 aa23.6■■□□□ 1.37
PEX11B-203ENST00000537888 BAZ1BQ9UIG0 1483 aaKnown RBP23.47■■□□□ 1.35
PEX11B-203ENST00000537888 WIZO95785 1651 aa23.31■■□□□ 1.32
PEX11B-203ENST00000537888 RSF1Q96T23 1441 aaPredicted RBP23.28■■□□□ 1.32
PEX11B-203ENST00000537888 NESP48681 1621 aa23.18■■□□□ 1.3
PEX11B-203ENST00000537888 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
PEX11B-203ENST00000537888 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
PEX11B-203ENST00000537888 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.28
PEX11B-203ENST00000537888 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
PEX11B-203ENST00000537888 CUX2O14529 1486 aa22.96■■□□□ 1.27
PEX11B-203ENST00000537888 PDS5BQ9NTI5 1447 aa22.92■■□□□ 1.26
PEX11B-203ENST00000537888 THOC2Q8NI27 1593 aaKnown RBP22.9■■□□□ 1.26
PEX11B-203ENST00000537888 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.26
PEX11B-203ENST00000537888 CFTRP13569 1480 aa22.86■■□□□ 1.25
PEX11B-203ENST00000537888 CCDC88BA6NC98 1476 aa22.8■■□□□ 1.24
PEX11B-203ENST00000537888 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
PEX11B-203ENST00000537888 MRC2Q9UBG0 1479 aa22.72■■□□□ 1.23
PEX11B-203ENST00000537888 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
PEX11B-203ENST00000537888 WDR62O43379 1518 aa22.68■■□□□ 1.22
PEX11B-203ENST00000537888 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
PEX11B-203ENST00000537888 URB2Q14146 1524 aaKnown RBP22.55■■□□□ 1.2
PEX11B-203ENST00000537888 SUPT5HO00267 1087 aaKnown RBP22.45■■□□□ 1.18
PEX11B-203ENST00000537888 DNAJC5Q9H3Z4 198 aa22.42■■□□□ 1.18
PEX11B-203ENST00000537888 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
PEX11B-203ENST00000537888 ABCC8Q09428 1581 aa22.32■■□□□ 1.16
PEX11B-203ENST00000537888 DNMBPQ6XZF7 1577 aa22.32■■□□□ 1.16
PEX11B-203ENST00000537888 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
PEX11B-203ENST00000537888 ZNF608Q9ULD9 1512 aaPredicted RBP22.19■■□□□ 1.14
PEX11B-203ENST00000537888 POLA1P09884 1462 aaPredicted RBP22.18■■□□□ 1.14
PEX11B-203ENST00000537888 TARBP1Q13395 1621 aaKnown RBP22.16■■□□□ 1.14
PEX11B-203ENST00000537888 CUX1P39880 1505 aa22.15■■□□□ 1.14
PEX11B-203ENST00000537888 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.13
PEX11B-203ENST00000537888 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.13
PEX11B-203ENST00000537888 RAD54L2Q9Y4B4 1467 aa22.06■■□□□ 1.12
PEX11B-203ENST00000537888 SOGA1O94964 1423 aa22.04■■□□□ 1.12
PEX11B-203ENST00000537888 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.112e-7■■■■■ 48.2
PEX11B-203ENST00000537888 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
PEX11B-203ENST00000537888 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
PEX11B-203ENST00000537888 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
PEX11B-203ENST00000537888 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
PEX11B-203ENST00000537888 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
PEX11B-203ENST00000537888 SYNJ1O43426 1573 aa21.91■■□□□ 1.1
PEX11B-203ENST00000537888 OSCARQ8IYS5 282 aa21.91■■□□□ 1.1
PEX11B-203ENST00000537888 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
PEX11B-203ENST00000537888 SNAPC4Q5SXM2 1469 aa21.82■■□□□ 1.08
PEX11B-203ENST00000537888 ABCA5Q8WWZ7 1642 aa21.82■■□□□ 1.08
PEX11B-203ENST00000537888 GRIN2BQ13224 1484 aa21.81■■□□□ 1.08
PEX11B-203ENST00000537888 CHD1O14646 1710 aa21.8■■□□□ 1.08
PEX11B-203ENST00000537888 GAPVD1Q14C86 1478 aa21.79■■□□□ 1.08
PEX11B-203ENST00000537888 MAGI1Q96QZ7 1491 aaPredicted RBP21.78■■□□□ 1.08
PEX11B-203ENST00000537888 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
PEX11B-203ENST00000537888 SYNJ2O15056 1496 aa21.7■■□□□ 1.06
PEX11B-203ENST00000537888 FBLN2P98095 1184 aa21.69■■□□□ 1.06
PEX11B-203ENST00000537888 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
PEX11B-203ENST00000537888 RIMBP3CA6NJZ7 1639 aa21.64■■□□□ 1.05
PEX11B-203ENST00000537888 RIMBP3BA6NNM3 1639 aa21.64■■□□□ 1.05
PEX11B-203ENST00000537888 RIMBP3Q9UFD9 1639 aa21.64■■□□□ 1.05
PEX11B-203ENST00000537888 ARHGEF11O15085 1522 aa21.63■■□□□ 1.05
PEX11B-203ENST00000537888 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
PEX11B-203ENST00000537888 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
PEX11B-203ENST00000537888 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
PEX11B-203ENST00000537888 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
PEX11B-203ENST00000537888 GRIN2AQ12879 1464 aa21.55■■□□□ 1.04
PEX11B-203ENST00000537888 FHAD1B1AJZ9 1412 aa21.54■■□□□ 1.04
PEX11B-203ENST00000537888 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
PEX11B-203ENST00000537888 NUP160Q12769 1436 aa21.49■■□□□ 1.03
PEX11B-203ENST00000537888 CEP170Q5SW79 1584 aa21.47■■□□□ 1.03
PEX11B-203ENST00000537888 ARAP1Q96P48 1450 aa21.47■■□□□ 1.03
PEX11B-203ENST00000537888 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
PEX11B-203ENST00000537888 IGF1RP08069 1367 aa21.42■■□□□ 1.02
PEX11B-203ENST00000537888 CYB5RLQ6IPT4 315 aa21.37■■□□□ 1.01
PEX11B-203ENST00000537888 CUL7Q14999 1698 aa21.35■■□□□ 1.01
PEX11B-203ENST00000537888 SHROOM2Q13796 1616 aa21.34■■□□□ 1.01
PEX11B-203ENST00000537888 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
PEX11B-203ENST00000537888 RUSC2Q8N2Y8 1516 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms