RNA–Protein interactions for RNA: ENST00000537478.1

AC006065.4-204, humanhuman

TSL 2 BASIC

Gene AC006065.4, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006065.4-204ENST00000537478 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
AC006065.4-204ENST00000537478 NISCHQ9Y2I1 1504 aa17.02■□□□□ 0.32
AC006065.4-204ENST00000537478 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
AC006065.4-204ENST00000537478 CCDC180Q9P1Z9 1646 aa15.34■□□□□ 0.05
AC006065.4-204ENST00000537478 ABCC9O60706 1549 aa15.25■□□□□ 0.03
AC006065.4-204ENST00000537478 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
AC006065.4-204ENST00000537478 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
AC006065.4-204ENST00000537478 RB1CC1Q8TDY2 1594 aa14.55□□□□□ -0.08
AC006065.4-204ENST00000537478 NACADO15069 1562 aa14.43□□□□□ -0.1
AC006065.4-204ENST00000537478 UNC13AQ9UPW8 1703 aa14.33□□□□□ -0.12
AC006065.4-204ENST00000537478 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
AC006065.4-204ENST00000537478 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
AC006065.4-204ENST00000537478 MYO15BQ96JP2 1530 aa14.2□□□□□ -0.14
AC006065.4-204ENST00000537478 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
AC006065.4-204ENST00000537478 BICRAQ9NZM4 1560 aa14.13□□□□□ -0.15
AC006065.4-204ENST00000537478 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
AC006065.4-204ENST00000537478 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
AC006065.4-204ENST00000537478 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
AC006065.4-204ENST00000537478 SHROOM4Q9ULL8 1493 aa13.9□□□□□ -0.18
AC006065.4-204ENST00000537478 FOXD1Q16676 465 aa13.84□□□□□ -0.19
AC006065.4-204ENST00000537478 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
AC006065.4-204ENST00000537478 EIF4G1Q04637 1599 aaKnown RBP13.78□□□□□ -0.2
AC006065.4-204ENST00000537478 POTEDQ86YR6 584 aa13.74□□□□□ -0.21
AC006065.4-204ENST00000537478 CECR2Q9BXF3 1484 aa13.73□□□□□ -0.21
AC006065.4-204ENST00000537478 PLPPR3Q6T4P5 718 aa13.67□□□□□ -0.22
AC006065.4-204ENST00000537478 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
AC006065.4-204ENST00000537478 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
AC006065.4-204ENST00000537478 ATAD2BQ9ULI0 1458 aa13.27□□□□□ -0.29
AC006065.4-204ENST00000537478 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
AC006065.4-204ENST00000537478 HMGXB3Q12766 1538 aa13.24□□□□□ -0.29
AC006065.4-204ENST00000537478 BAZ1AQ9NRL2 1556 aaPredicted RBP13.23□□□□□ -0.29
AC006065.4-204ENST00000537478 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
AC006065.4-204ENST00000537478 PEG3Q9GZU2 1588 aa13.16□□□□□ -0.3
AC006065.4-204ENST00000537478 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
AC006065.4-204ENST00000537478 MROH2BQ7Z745 1585 aa13.13□□□□□ -0.31
AC006065.4-204ENST00000537478 ADRA2BP18089 450 aa13.13□□□□□ -0.31
AC006065.4-204ENST00000537478 NESP48681 1621 aa13.12□□□□□ -0.31
AC006065.4-204ENST00000537478 CUX2O14529 1486 aa13.11□□□□□ -0.31
AC006065.4-204ENST00000537478 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
AC006065.4-204ENST00000537478 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
AC006065.4-204ENST00000537478 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
AC006065.4-204ENST00000537478 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
AC006065.4-204ENST00000537478 THOC2Q8NI27 1593 aaKnown RBP13.03□□□□□ -0.32
AC006065.4-204ENST00000537478 WIZO95785 1651 aa13.02□□□□□ -0.32
AC006065.4-204ENST00000537478 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
AC006065.4-204ENST00000537478 MSH5O43196 834 aa12.94□□□□□ -0.34
AC006065.4-204ENST00000537478 PDS5BQ9NTI5 1447 aa12.9□□□□□ -0.34
AC006065.4-204ENST00000537478 CADPSQ9ULU8 1353 aa12.87□□□□□ -0.35
AC006065.4-204ENST00000537478 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.35
AC006065.4-204ENST00000537478 RSF1Q96T23 1441 aaPredicted RBP12.83□□□□□ -0.36
AC006065.4-204ENST00000537478 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
AC006065.4-204ENST00000537478 WDR62O43379 1518 aa12.82□□□□□ -0.36
AC006065.4-204ENST00000537478 CEP164Q9UPV0 1460 aa12.79□□□□□ -0.36
AC006065.4-204ENST00000537478 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
AC006065.4-204ENST00000537478 FANCD2Q9BXW9 1451 aa12.77□□□□□ -0.37
AC006065.4-204ENST00000537478 CFTRP13569 1480 aa12.75□□□□□ -0.37
AC006065.4-204ENST00000537478 URB2Q14146 1524 aaKnown RBP12.67□□□□□ -0.38
AC006065.4-204ENST00000537478 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
AC006065.4-204ENST00000537478 TOPBP1Q92547 1522 aa12.54□□□□□ -0.4
AC006065.4-204ENST00000537478 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.41
AC006065.4-204ENST00000537478 DNMBPQ6XZF7 1577 aa12.52□□□□□ -0.41
AC006065.4-204ENST00000537478 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
AC006065.4-204ENST00000537478 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
AC006065.4-204ENST00000537478 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
AC006065.4-204ENST00000537478 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
AC006065.4-204ENST00000537478 TARBP1Q13395 1621 aaKnown RBP12.46□□□□□ -0.41
AC006065.4-204ENST00000537478 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
AC006065.4-204ENST00000537478 CHD1O14646 1710 aa12.44□□□□□ -0.42
AC006065.4-204ENST00000537478 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
AC006065.4-204ENST00000537478 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
AC006065.4-204ENST00000537478 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
AC006065.4-204ENST00000537478 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
AC006065.4-204ENST00000537478 AQRO60306 1485 aaKnown RBP eCLIP12.38□□□□□ -0.43
AC006065.4-204ENST00000537478 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
AC006065.4-204ENST00000537478 ARHGEF11O15085 1522 aa12.35□□□□□ -0.43
AC006065.4-204ENST00000537478 CUX1P39880 1505 aa12.35□□□□□ -0.43
AC006065.4-204ENST00000537478 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
AC006065.4-204ENST00000537478 WDR97A6NE52 1622 aa12.33□□□□□ -0.43
AC006065.4-204ENST00000537478 SOGA1O94964 1423 aa12.31□□□□□ -0.44
AC006065.4-204ENST00000537478 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
AC006065.4-204ENST00000537478 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
AC006065.4-204ENST00000537478 SNAPC4Q5SXM2 1469 aa12.28□□□□□ -0.44
AC006065.4-204ENST00000537478 SUPT5HO00267 1087 aaKnown RBP12.27□□□□□ -0.45
AC006065.4-204ENST00000537478 FBLN2P98095 1184 aa12.27□□□□□ -0.45
AC006065.4-204ENST00000537478 CLASP1Q7Z460 1538 aa12.23□□□□□ -0.45
AC006065.4-204ENST00000537478 MAGI1Q96QZ7 1491 aaPredicted RBP12.23□□□□□ -0.45
AC006065.4-204ENST00000537478 ABCA5Q8WWZ7 1642 aa12.22□□□□□ -0.45
AC006065.4-204ENST00000537478 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
AC006065.4-204ENST00000537478 GRIN2BQ13224 1484 aa12.22□□□□□ -0.45
AC006065.4-204ENST00000537478 ARAP1Q96P48 1450 aa12.22□□□□□ -0.45
AC006065.4-204ENST00000537478 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
AC006065.4-204ENST00000537478 SYNJ2O15056 1496 aa12.19□□□□□ -0.46
AC006065.4-204ENST00000537478 GAPVD1Q14C86 1478 aa12.19□□□□□ -0.46
AC006065.4-204ENST00000537478 ABCA10Q8WWZ4 1543 aa12.18□□□□□ -0.46
AC006065.4-204ENST00000537478 CYB5RLQ6IPT4 315 aa12.18□□□□□ -0.46
AC006065.4-204ENST00000537478 TOP2BQ02880 1626 aa12.17□□□□□ -0.46
AC006065.4-204ENST00000537478 CHMP7Q8WUX9 453 aaPredicted RBP12.16□□□□□ -0.46
AC006065.4-204ENST00000537478 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
AC006065.4-204ENST00000537478 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
AC006065.4-204ENST00000537478 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms