RNA–Protein interactions for RNA: ENST00000537446.5

RAB6A-205, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-205ENST00000537446 AEBP2Q6ZN18 517 aaPredicted RBP19.23■□□□□ 0.67
RAB6A-205ENST00000537446 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
RAB6A-205ENST00000537446 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
RAB6A-205ENST00000537446 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
RAB6A-205ENST00000537446 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
RAB6A-205ENST00000537446 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
RAB6A-205ENST00000537446 FOXD1Q16676 465 aa15.29■□□□□ 0.04
RAB6A-205ENST00000537446 ABCC9O60706 1549 aa15.15■□□□□ 0.02
RAB6A-205ENST00000537446 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
RAB6A-205ENST00000537446 RB1CC1Q8TDY2 1594 aa14.67□□□□□ -0.06
RAB6A-205ENST00000537446 NACADO15069 1562 aa14.64□□□□□ -0.07
RAB6A-205ENST00000537446 ZCCHC6Q5VYS8 1495 aaKnown RBP14.56□□□□□ -0.08
RAB6A-205ENST00000537446 MYO15BQ96JP2 1530 aa14.54□□□□□ -0.08
RAB6A-205ENST00000537446 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
RAB6A-205ENST00000537446 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.09
RAB6A-205ENST00000537446 PPP6R1Q9UPN7 881 aa14.34□□□□□ -0.11
RAB6A-205ENST00000537446 PIAS4Q8N2W9 510 aaPredicted RBP14.33□□□□□ -0.12
RAB6A-205ENST00000537446 ADRA2BP18089 450 aa14.32□□□□□ -0.12
RAB6A-205ENST00000537446 MSH5O43196 834 aa14.3□□□□□ -0.12
RAB6A-205ENST00000537446 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
RAB6A-205ENST00000537446 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
RAB6A-205ENST00000537446 SCRIBQ14160 1630 aa14.2□□□□□ -0.14
RAB6A-205ENST00000537446 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
RAB6A-205ENST00000537446 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
RAB6A-205ENST00000537446 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
RAB6A-205ENST00000537446 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
RAB6A-205ENST00000537446 CC2D2AQ9P2K1 1620 aa13.8□□□□□ -0.2
RAB6A-205ENST00000537446 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
RAB6A-205ENST00000537446 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
RAB6A-205ENST00000537446 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
RAB6A-205ENST00000537446 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
RAB6A-205ENST00000537446 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
RAB6A-205ENST00000537446 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
RAB6A-205ENST00000537446 HMGXB3Q12766 1538 aa13.47□□□□□ -0.25
RAB6A-205ENST00000537446 ATAD2BQ9ULI0 1458 aa13.43□□□□□ -0.26
RAB6A-205ENST00000537446 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
RAB6A-205ENST00000537446 MROH2BQ7Z745 1585 aa13.41□□□□□ -0.26
RAB6A-205ENST00000537446 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
RAB6A-205ENST00000537446 WIZO95785 1651 aa13.33□□□□□ -0.28
RAB6A-205ENST00000537446 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
RAB6A-205ENST00000537446 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
RAB6A-205ENST00000537446 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
RAB6A-205ENST00000537446 PRDM2Q13029 1718 aa13.14□□□□□ -0.31
RAB6A-205ENST00000537446 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
RAB6A-205ENST00000537446 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
RAB6A-205ENST00000537446 KIF21AQ7Z4S6 1674 aa13.12□□□□□ -0.31
RAB6A-205ENST00000537446 NESP48681 1621 aa13.11□□□□□ -0.31
RAB6A-205ENST00000537446 ERCC6Q03468 1493 aa13.08□□□□□ -0.32
RAB6A-205ENST00000537446 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
RAB6A-205ENST00000537446 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
RAB6A-205ENST00000537446 CUX2O14529 1486 aa13□□□□□ -0.33
RAB6A-205ENST00000537446 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
RAB6A-205ENST00000537446 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.33
RAB6A-205ENST00000537446 CFTRP13569 1480 aa12.96□□□□□ -0.34
RAB6A-205ENST00000537446 CCDC88BA6NC98 1476 aa12.92□□□□□ -0.34
RAB6A-205ENST00000537446 WDR62O43379 1518 aa12.92□□□□□ -0.34
RAB6A-205ENST00000537446 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
RAB6A-205ENST00000537446 MRC2Q9UBG0 1479 aa12.9□□□□□ -0.34
RAB6A-205ENST00000537446 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
RAB6A-205ENST00000537446 FANCD2Q9BXW9 1451 aa12.89□□□□□ -0.35
RAB6A-205ENST00000537446 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
RAB6A-205ENST00000537446 DNMBPQ6XZF7 1577 aa12.74□□□□□ -0.37
RAB6A-205ENST00000537446 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
RAB6A-205ENST00000537446 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
RAB6A-205ENST00000537446 SUPT5HO00267 1087 aaKnown RBP12.68□□□□□ -0.38
RAB6A-205ENST00000537446 WDR97A6NE52 1622 aa12.63□□□□□ -0.39
RAB6A-205ENST00000537446 TARBP1Q13395 1621 aaKnown RBP12.63□□□□□ -0.39
RAB6A-205ENST00000537446 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
RAB6A-205ENST00000537446 EIF4G3O43432 1585 aaKnown RBP12.63□□□□□ -0.39
RAB6A-205ENST00000537446 IFT140Q96RY7 1462 aa12.61□□□□□ -0.39
RAB6A-205ENST00000537446 CUX1P39880 1505 aa12.61□□□□□ -0.39
RAB6A-205ENST00000537446 BIVM-ERCC5R4GMW8 1640 aa12.59□□□□□ -0.39
RAB6A-205ENST00000537446 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
RAB6A-205ENST00000537446 DCAF8L1A6NGE4 600 aa12.56□□□□□ -0.4
RAB6A-205ENST00000537446 HOXD11P31277 338 aaPredicted RBP12.56□□□□□ -0.4
RAB6A-205ENST00000537446 FGD5Q6ZNL6 1462 aa12.56□□□□□ -0.4
RAB6A-205ENST00000537446 ZNF608Q9ULD9 1512 aaPredicted RBP12.54□□□□□ -0.4
RAB6A-205ENST00000537446 TOP2BQ02880 1626 aa12.54□□□□□ -0.4
RAB6A-205ENST00000537446 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
RAB6A-205ENST00000537446 SYNJ1O43426 1573 aa12.52□□□□□ -0.4
RAB6A-205ENST00000537446 CHD1O14646 1710 aa12.52□□□□□ -0.41
RAB6A-205ENST00000537446 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
RAB6A-205ENST00000537446 RNF216Q9NWF9 866 aaPredicted RBP12.49□□□□□ -0.41
RAB6A-205ENST00000537446 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
RAB6A-205ENST00000537446 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
RAB6A-205ENST00000537446 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
RAB6A-205ENST00000537446 SOGA1O94964 1423 aa12.45□□□□□ -0.42
RAB6A-205ENST00000537446 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
RAB6A-205ENST00000537446 ABCA10Q8WWZ4 1543 aa12.43□□□□□ -0.42
RAB6A-205ENST00000537446 AQRO60306 1485 aaKnown RBP eCLIP12.41□□□□□ -0.42
RAB6A-205ENST00000537446 MAGI1Q96QZ7 1491 aaPredicted RBP12.39□□□□□ -0.43
RAB6A-205ENST00000537446 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
RAB6A-205ENST00000537446 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
RAB6A-205ENST00000537446 ADAMTS12P58397 1594 aa12.37□□□□□ -0.43
RAB6A-205ENST00000537446 GAPVD1Q14C86 1478 aa12.36□□□□□ -0.43
RAB6A-205ENST00000537446 TDRD9Q8NDG6 1382 aaKnown RBP12.35□□□□□ -0.43
RAB6A-205ENST00000537446 ERICH3Q5RHP9 1530 aa12.32□□□□□ -0.44
RAB6A-205ENST00000537446 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
RAB6A-205ENST00000537446 CLASP1Q7Z460 1538 aa12.31□□□□□ -0.44
RAB6A-205ENST00000537446 RIMBP3CA6NJZ7 1639 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms