RNA–Protein interactions for RNA: ENST00000537315.5

RFC5-208, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-208ENST00000537315 NISCHQ9Y2I1 1504 aa29.87■■■□□ 2.37
RFC5-208ENST00000537315 CCDC180Q9P1Z9 1646 aa26.8■■□□□ 1.88
RFC5-208ENST00000537315 ABCC9O60706 1549 aa26.4■■□□□ 1.82
RFC5-208ENST00000537315 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
RFC5-208ENST00000537315 NACADO15069 1562 aa25.14■■□□□ 1.62
RFC5-208ENST00000537315 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
RFC5-208ENST00000537315 UNC13AQ9UPW8 1703 aa24.94■■□□□ 1.58
RFC5-208ENST00000537315 ZCCHC6Q5VYS8 1495 aaKnown RBP24.87■■□□□ 1.57
RFC5-208ENST00000537315 MYO15BQ96JP2 1530 aa24.84■■□□□ 1.57
RFC5-208ENST00000537315 DCAF1Q9Y4B6 1507 aa24.67■■□□□ 1.54
RFC5-208ENST00000537315 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.52
RFC5-208ENST00000537315 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
RFC5-208ENST00000537315 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
RFC5-208ENST00000537315 DNAJC5BQ9UF47 199 aa24.37■■□□□ 1.49
RFC5-208ENST00000537315 SHROOM4Q9ULL8 1493 aa24.17■■□□□ 1.46
RFC5-208ENST00000537315 EIF4G1Q04637 1599 aaKnown RBP23.92■■□□□ 1.42
RFC5-208ENST00000537315 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
RFC5-208ENST00000537315 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
RFC5-208ENST00000537315 SMARCA4P51532 1647 aa23.33■■□□□ 1.33
RFC5-208ENST00000537315 BAZ1AQ9NRL2 1556 aaPredicted RBP23.19■■□□□ 1.3
RFC5-208ENST00000537315 ATAD2BQ9ULI0 1458 aa23.16■■□□□ 1.3
RFC5-208ENST00000537315 SMARCA2P51531 1590 aa23.14■■□□□ 1.3
RFC5-208ENST00000537315 NCAPD3P42695 1498 aa23.13■■□□□ 1.29
RFC5-208ENST00000537315 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
RFC5-208ENST00000537315 MROH2BQ7Z745 1585 aa23.06■■□□□ 1.28
RFC5-208ENST00000537315 PEG3Q9GZU2 1588 aa23.04■■□□□ 1.28
RFC5-208ENST00000537315 BAZ1BQ9UIG0 1483 aaKnown RBP22.99■■□□□ 1.27
RFC5-208ENST00000537315 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
RFC5-208ENST00000537315 WIZO95785 1651 aa22.89■■□□□ 1.25
RFC5-208ENST00000537315 NESP48681 1621 aa22.8■■□□□ 1.24
RFC5-208ENST00000537315 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
RFC5-208ENST00000537315 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
RFC5-208ENST00000537315 KIF21AQ7Z4S6 1674 aa22.66■■□□□ 1.22
RFC5-208ENST00000537315 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
RFC5-208ENST00000537315 CUX2O14529 1486 aa22.58■■□□□ 1.2
RFC5-208ENST00000537315 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
RFC5-208ENST00000537315 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
RFC5-208ENST00000537315 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
RFC5-208ENST00000537315 PDS5BQ9NTI5 1447 aa22.41■■□□□ 1.18
RFC5-208ENST00000537315 PRDM2Q13029 1718 aa22.38■■□□□ 1.17
RFC5-208ENST00000537315 MRC2Q9UBG0 1479 aa22.29■■□□□ 1.16
RFC5-208ENST00000537315 CFTRP13569 1480 aa22.28■■□□□ 1.16
RFC5-208ENST00000537315 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
RFC5-208ENST00000537315 WDR62O43379 1518 aa22.26■■□□□ 1.15
RFC5-208ENST00000537315 FANCD2Q9BXW9 1451 aa22.26■■□□□ 1.15
RFC5-208ENST00000537315 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
RFC5-208ENST00000537315 URB2Q14146 1524 aaKnown RBP22.1■■□□□ 1.13
RFC5-208ENST00000537315 DNAJC5Q9H3Z4 198 aa22.07■■□□□ 1.12
RFC5-208ENST00000537315 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
RFC5-208ENST00000537315 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
RFC5-208ENST00000537315 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
RFC5-208ENST00000537315 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
RFC5-208ENST00000537315 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
RFC5-208ENST00000537315 ZNF608Q9ULD9 1512 aaPredicted RBP21.76■■□□□ 1.07
RFC5-208ENST00000537315 EIF4G3O43432 1585 aaKnown RBP21.76■■□□□ 1.07
RFC5-208ENST00000537315 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
RFC5-208ENST00000537315 POLA1P09884 1462 aaPredicted RBP21.69■■□□□ 1.06
RFC5-208ENST00000537315 CUX1P39880 1505 aa21.67■■□□□ 1.06
RFC5-208ENST00000537315 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
RFC5-208ENST00000537315 CHD1O14646 1710 aa21.61■■□□□ 1.05
RFC5-208ENST00000537315 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
RFC5-208ENST00000537315 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
RFC5-208ENST00000537315 AQRO60306 1485 aaKnown RBP eCLIP21.56■■□□□ 1.041e-6■■■□□ 15.7
RFC5-208ENST00000537315 SOGA1O94964 1423 aa21.51■■□□□ 1.03
RFC5-208ENST00000537315 PBRM1Q86U86 1689 aa21.5■■□□□ 1.03
RFC5-208ENST00000537315 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
RFC5-208ENST00000537315 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
RFC5-208ENST00000537315 SYNJ1O43426 1573 aa21.45■■□□□ 1.02
RFC5-208ENST00000537315 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
RFC5-208ENST00000537315 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.02
RFC5-208ENST00000537315 TOP2BQ02880 1626 aa21.42■■□□□ 1.02
RFC5-208ENST00000537315 SNAPC4Q5SXM2 1469 aa21.41■■□□□ 1.02
RFC5-208ENST00000537315 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
RFC5-208ENST00000537315 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
RFC5-208ENST00000537315 ABCA5Q8WWZ7 1642 aa21.4■■□□□ 1.02
RFC5-208ENST00000537315 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
RFC5-208ENST00000537315 ABCA10Q8WWZ4 1543 aa21.35■■□□□ 1.01
RFC5-208ENST00000537315 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
RFC5-208ENST00000537315 GRIN2BQ13224 1484 aa21.33■■□□□ 1.01
RFC5-208ENST00000537315 TRIM41Q8WV44 630 aa21.33■■□□□ 1.01
RFC5-208ENST00000537315 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
RFC5-208ENST00000537315 ARHGEF11O15085 1522 aa21.31■■□□□ 1
RFC5-208ENST00000537315 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
RFC5-208ENST00000537315 FBLN2P98095 1184 aa21.29■■□□□ 1
RFC5-208ENST00000537315 CLASP1Q7Z460 1538 aa21.24■□□□□ 0.99
RFC5-208ENST00000537315 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
RFC5-208ENST00000537315 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
RFC5-208ENST00000537315 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
RFC5-208ENST00000537315 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
RFC5-208ENST00000537315 ERICH3Q5RHP9 1530 aa21.1■□□□□ 0.97
RFC5-208ENST00000537315 GRIN2AQ12879 1464 aa21.1■□□□□ 0.97
RFC5-208ENST00000537315 CEP170Q5SW79 1584 aa21.09■□□□□ 0.97
RFC5-208ENST00000537315 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
RFC5-208ENST00000537315 NUP160Q12769 1436 aa20.98■□□□□ 0.95
RFC5-208ENST00000537315 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
RFC5-208ENST00000537315 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
RFC5-208ENST00000537315 SHROOM2Q13796 1616 aa20.96■□□□□ 0.95
RFC5-208ENST00000537315 CUL7Q14999 1698 aa20.95■□□□□ 0.94
RFC5-208ENST00000537315 RUSC2Q8N2Y8 1516 aa20.93■□□□□ 0.94
RFC5-208ENST00000537315 KIF27Q86VH2 1401 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms