RNA–Protein interactions for RNA: ENST00000537289.1

COA4-202, Transcript of cytochrome c oxidase assembly factor 4 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COA4, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA4-202ENST00000537289 NISCHQ9Y2I1 1504 aa25.89■■□□□ 1.74
COA4-202ENST00000537289 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.32
COA4-202ENST00000537289 ABCC9O60706 1549 aa22.87■■□□□ 1.25
COA4-202ENST00000537289 RB1CC1Q8TDY2 1594 aa21.93■■□□□ 1.1
COA4-202ENST00000537289 NACADO15069 1562 aa21.83■■□□□ 1.09
COA4-202ENST00000537289 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
COA4-202ENST00000537289 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
COA4-202ENST00000537289 ZCCHC6Q5VYS8 1495 aaKnown RBP21.58■■□□□ 1.05
COA4-202ENST00000537289 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
COA4-202ENST00000537289 BICRAQ9NZM4 1560 aa21.45■■□□□ 1.02
COA4-202ENST00000537289 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
COA4-202ENST00000537289 DNAJC5BQ9UF47 199 aa21.24■□□□□ 0.99
COA4-202ENST00000537289 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
COA4-202ENST00000537289 SCRIBQ14160 1630 aa21.15■□□□□ 0.98
COA4-202ENST00000537289 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
COA4-202ENST00000537289 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
COA4-202ENST00000537289 CC2D2AQ9P2K1 1620 aa20.8■□□□□ 0.92
COA4-202ENST00000537289 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
COA4-202ENST00000537289 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
COA4-202ENST00000537289 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
COA4-202ENST00000537289 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
COA4-202ENST00000537289 ATAD2BQ9ULI0 1458 aa20.09■□□□□ 0.81
COA4-202ENST00000537289 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.81
COA4-202ENST00000537289 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
COA4-202ENST00000537289 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
COA4-202ENST00000537289 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
COA4-202ENST00000537289 BAZ1BQ9UIG0 1483 aaKnown RBP19.87■□□□□ 0.77
COA4-202ENST00000537289 WIZO95785 1651 aa19.81■□□□□ 0.76
COA4-202ENST00000537289 NESP48681 1621 aa19.78■□□□□ 0.76
COA4-202ENST00000537289 THOC2Q8NI27 1593 aaKnown RBP19.71■□□□□ 0.75
COA4-202ENST00000537289 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
COA4-202ENST00000537289 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
COA4-202ENST00000537289 CUX2O14529 1486 aa19.67■□□□□ 0.74
COA4-202ENST00000537289 ERCC6Q03468 1493 aa19.64■□□□□ 0.73
COA4-202ENST00000537289 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
COA4-202ENST00000537289 TOP2AP11388 1531 aaKnown RBP19.53■□□□□ 0.72
COA4-202ENST00000537289 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
COA4-202ENST00000537289 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
COA4-202ENST00000537289 WDR62O43379 1518 aa19.39■□□□□ 0.69
COA4-202ENST00000537289 PDS5BQ9NTI5 1447 aa19.38■□□□□ 0.69
COA4-202ENST00000537289 CFTRP13569 1480 aa19.34■□□□□ 0.69
COA4-202ENST00000537289 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
COA4-202ENST00000537289 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
COA4-202ENST00000537289 FANCD2Q9BXW9 1451 aa19.27■□□□□ 0.67
COA4-202ENST00000537289 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
COA4-202ENST00000537289 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
COA4-202ENST00000537289 URB2Q14146 1524 aaKnown RBP19.19■□□□□ 0.66
COA4-202ENST00000537289 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
COA4-202ENST00000537289 DNMBPQ6XZF7 1577 aa18.98■□□□□ 0.63
COA4-202ENST00000537289 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
COA4-202ENST00000537289 EIF4G3O43432 1585 aaKnown RBP18.91■□□□□ 0.62
COA4-202ENST00000537289 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
COA4-202ENST00000537289 IFT140Q96RY7 1462 aa18.86■□□□□ 0.61
COA4-202ENST00000537289 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
COA4-202ENST00000537289 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
COA4-202ENST00000537289 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
COA4-202ENST00000537289 CHD1O14646 1710 aa18.79■□□□□ 0.6
COA4-202ENST00000537289 CUX1P39880 1505 aa18.78■□□□□ 0.6
COA4-202ENST00000537289 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
COA4-202ENST00000537289 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
COA4-202ENST00000537289 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
COA4-202ENST00000537289 RIMBP3CA6NJZ7 1639 aa18.65■□□□□ 0.58
COA4-202ENST00000537289 RIMBP3BA6NNM3 1639 aa18.65■□□□□ 0.58
COA4-202ENST00000537289 RIMBP3Q9UFD9 1639 aa18.65■□□□□ 0.58
COA4-202ENST00000537289 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.571e-6■■□□□ 14.5
COA4-202ENST00000537289 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
COA4-202ENST00000537289 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
COA4-202ENST00000537289 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
COA4-202ENST00000537289 SOGA1O94964 1423 aa18.56■□□□□ 0.56
COA4-202ENST00000537289 TOP2BQ02880 1626 aa18.55■□□□□ 0.56
COA4-202ENST00000537289 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
COA4-202ENST00000537289 ARHGEF11O15085 1522 aa18.54■□□□□ 0.56
COA4-202ENST00000537289 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
COA4-202ENST00000537289 OSCARQ8IYS5 282 aa18.52■□□□□ 0.56
COA4-202ENST00000537289 CLASP1Q7Z460 1538 aa18.52■□□□□ 0.56
COA4-202ENST00000537289 ABCA10Q8WWZ4 1543 aa18.51■□□□□ 0.55
COA4-202ENST00000537289 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
COA4-202ENST00000537289 MAGI1Q96QZ7 1491 aaPredicted RBP18.48■□□□□ 0.55
COA4-202ENST00000537289 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
COA4-202ENST00000537289 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
COA4-202ENST00000537289 GAPVD1Q14C86 1478 aa18.4■□□□□ 0.54
COA4-202ENST00000537289 SYNJ2O15056 1496 aa18.39■□□□□ 0.54
COA4-202ENST00000537289 ARAP1Q96P48 1450 aa18.39■□□□□ 0.54
COA4-202ENST00000537289 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
COA4-202ENST00000537289 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
COA4-202ENST00000537289 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
COA4-202ENST00000537289 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
COA4-202ENST00000537289 SHROOM2Q13796 1616 aa18.27■□□□□ 0.52
COA4-202ENST00000537289 GRIN2AQ12879 1464 aa18.27■□□□□ 0.52
COA4-202ENST00000537289 ERCC6L2Q5T890 1561 aa18.24■□□□□ 0.51
COA4-202ENST00000537289 NUP160Q12769 1436 aa18.23■□□□□ 0.51
COA4-202ENST00000537289 FBLN2P98095 1184 aa18.22■□□□□ 0.51
COA4-202ENST00000537289 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
COA4-202ENST00000537289 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
COA4-202ENST00000537289 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
COA4-202ENST00000537289 CUL7Q14999 1698 aa18.12■□□□□ 0.49
COA4-202ENST00000537289 CYB5RLQ6IPT4 315 aa18.08■□□□□ 0.48
COA4-202ENST00000537289 KIF13AQ9H1H9 1805 aa17.97■□□□□ 0.47
COA4-202ENST00000537289 KIF27Q86VH2 1401 aa17.97■□□□□ 0.47
COA4-202ENST00000537289 IGF1RP08069 1367 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms