RNA–Protein interactions for RNA: ENST00000536915.5

CYB561A3-208, Transcript of cytochrome b561 family member A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CYB561A3, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-208ENST00000536915 NISCHQ9Y2I1 1504 aa33.23■■■□□ 2.91
CYB561A3-208ENST00000536915 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
CYB561A3-208ENST00000536915 ABCC9O60706 1549 aa29.67■■■□□ 2.34
CYB561A3-208ENST00000536915 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
CYB561A3-208ENST00000536915 NACADO15069 1562 aa28.27■■■□□ 2.12
CYB561A3-208ENST00000536915 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
CYB561A3-208ENST00000536915 MYO15BQ96JP2 1530 aa27.89■■■□□ 2.06
CYB561A3-208ENST00000536915 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
CYB561A3-208ENST00000536915 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
CYB561A3-208ENST00000536915 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
CYB561A3-208ENST00000536915 DCAF1Q9Y4B6 1507 aa27.54■■■□□ 2
CYB561A3-208ENST00000536915 PABPN1Q86U42 306 aaKnown RBP eCLIP27.52■■■□□ 2
CYB561A3-208ENST00000536915 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.99
CYB561A3-208ENST00000536915 SHROOM4Q9ULL8 1493 aa27.32■■□□□ 1.96
CYB561A3-208ENST00000536915 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
CYB561A3-208ENST00000536915 CC2D2AQ9P2K1 1620 aa26.9■■□□□ 1.9
CYB561A3-208ENST00000536915 EIF4G1Q04637 1599 aaKnown RBP26.85■■□□□ 1.89
CYB561A3-208ENST00000536915 CECR2Q9BXF3 1484 aa26.77■■□□□ 1.88
CYB561A3-208ENST00000536915 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
CYB561A3-208ENST00000536915 SMARCA4P51532 1647 aa25.97■■□□□ 1.75
CYB561A3-208ENST00000536915 SMARCA2P51531 1590 aa25.97■■□□□ 1.75
CYB561A3-208ENST00000536915 HMGXB3Q12766 1538 aa25.89■■□□□ 1.74
CYB561A3-208ENST00000536915 ATAD2BQ9ULI0 1458 aa25.89■■□□□ 1.73
CYB561A3-208ENST00000536915 BAZ1AQ9NRL2 1556 aaPredicted RBP25.89■■□□□ 1.73
CYB561A3-208ENST00000536915 ERCC6Q03468 1493 aa25.74■■□□□ 1.71
CYB561A3-208ENST00000536915 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
CYB561A3-208ENST00000536915 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
CYB561A3-208ENST00000536915 CUX2O14529 1486 aa25.67■■□□□ 1.7
CYB561A3-208ENST00000536915 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
CYB561A3-208ENST00000536915 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
CYB561A3-208ENST00000536915 NESP48681 1621 aa25.45■■□□□ 1.67
CYB561A3-208ENST00000536915 DNAJC5Q9H3Z4 198 aa25.41■■□□□ 1.66
CYB561A3-208ENST00000536915 THOC2Q8NI27 1593 aaKnown RBP25.33■■□□□ 1.65
CYB561A3-208ENST00000536915 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
CYB561A3-208ENST00000536915 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
CYB561A3-208ENST00000536915 WIZO95785 1651 aa25.31■■□□□ 1.64
CYB561A3-208ENST00000536915 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
CYB561A3-208ENST00000536915 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
CYB561A3-208ENST00000536915 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
CYB561A3-208ENST00000536915 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
CYB561A3-208ENST00000536915 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.59
CYB561A3-208ENST00000536915 WDR62O43379 1518 aa25.01■■□□□ 1.59
CYB561A3-208ENST00000536915 PRDM2Q13029 1718 aa24.97■■□□□ 1.59
CYB561A3-208ENST00000536915 CFTRP13569 1480 aa24.92■■□□□ 1.58
CYB561A3-208ENST00000536915 FANCD2Q9BXW9 1451 aa24.92■■□□□ 1.58
CYB561A3-208ENST00000536915 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
CYB561A3-208ENST00000536915 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
CYB561A3-208ENST00000536915 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
CYB561A3-208ENST00000536915 IFT140Q96RY7 1462 aa24.49■■□□□ 1.51
CYB561A3-208ENST00000536915 TOPBP1Q92547 1522 aa24.46■■□□□ 1.51
CYB561A3-208ENST00000536915 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
CYB561A3-208ENST00000536915 OSCARQ8IYS5 282 aa24.43■■□□□ 1.5
CYB561A3-208ENST00000536915 TRIM41Q8WV44 630 aa24.34■■□□□ 1.49
CYB561A3-208ENST00000536915 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.49
CYB561A3-208ENST00000536915 ZNF608Q9ULD9 1512 aaPredicted RBP24.3■■□□□ 1.48
CYB561A3-208ENST00000536915 TARBP1Q13395 1621 aaKnown RBP24.24■■□□□ 1.47
CYB561A3-208ENST00000536915 POLA1P09884 1462 aaPredicted RBP24.19■■□□□ 1.46
CYB561A3-208ENST00000536915 WDR97A6NE52 1622 aa24.19■■□□□ 1.46
CYB561A3-208ENST00000536915 CHD1O14646 1710 aa24.18■■□□□ 1.46
CYB561A3-208ENST00000536915 RIMBP3CA6NJZ7 1639 aa24.15■■□□□ 1.46
CYB561A3-208ENST00000536915 RIMBP3BA6NNM3 1639 aa24.15■■□□□ 1.46
CYB561A3-208ENST00000536915 RIMBP3Q9UFD9 1639 aa24.15■■□□□ 1.46
CYB561A3-208ENST00000536915 AQRO60306 1485 aaKnown RBP eCLIP24.1■■□□□ 1.45
CYB561A3-208ENST00000536915 SOGA1O94964 1423 aa24.09■■□□□ 1.45
CYB561A3-208ENST00000536915 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
CYB561A3-208ENST00000536915 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
CYB561A3-208ENST00000536915 RAD54L2Q9Y4B4 1467 aa24.03■■□□□ 1.44
CYB561A3-208ENST00000536915 CUX1P39880 1505 aa24.02■■□□□ 1.44
CYB561A3-208ENST00000536915 FBLN2P98095 1184 aa23.98■■□□□ 1.43
CYB561A3-208ENST00000536915 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
CYB561A3-208ENST00000536915 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
CYB561A3-208ENST00000536915 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
CYB561A3-208ENST00000536915 PBRM1Q86U86 1689 aa23.95■■□□□ 1.42
CYB561A3-208ENST00000536915 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
CYB561A3-208ENST00000536915 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
CYB561A3-208ENST00000536915 GRIN2BQ13224 1484 aa23.92■■□□□ 1.42
CYB561A3-208ENST00000536915 CHMP7Q8WUX9 453 aaPredicted RBP23.85■■□□□ 1.41
CYB561A3-208ENST00000536915 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
CYB561A3-208ENST00000536915 GAPVD1Q14C86 1478 aa23.83■■□□□ 1.41
CYB561A3-208ENST00000536915 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
CYB561A3-208ENST00000536915 ABCA5Q8WWZ7 1642 aa23.82■■□□□ 1.4
CYB561A3-208ENST00000536915 CLASP1Q7Z460 1538 aa23.8■■□□□ 1.4
CYB561A3-208ENST00000536915 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
CYB561A3-208ENST00000536915 CYB5RLQ6IPT4 315 aa23.79■■□□□ 1.4
CYB561A3-208ENST00000536915 ARAP1Q96P48 1450 aa23.76■■□□□ 1.39
CYB561A3-208ENST00000536915 TOP2BQ02880 1626 aa23.76■■□□□ 1.39
CYB561A3-208ENST00000536915 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
CYB561A3-208ENST00000536915 ADAMTS12P58397 1594 aa23.64■■□□□ 1.37
CYB561A3-208ENST00000536915 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
CYB561A3-208ENST00000536915 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
CYB561A3-208ENST00000536915 TRHP20396 242 aaPredicted RBP23.57■■□□□ 1.36
CYB561A3-208ENST00000536915 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
CYB561A3-208ENST00000536915 NUP160Q12769 1436 aa23.49■■□□□ 1.35
CYB561A3-208ENST00000536915 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
CYB561A3-208ENST00000536915 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
CYB561A3-208ENST00000536915 CUL7Q14999 1698 aa23.35■■□□□ 1.33
CYB561A3-208ENST00000536915 ERCC6L2Q5T890 1561 aa23.33■■□□□ 1.33
CYB561A3-208ENST00000536915 RUSC2Q8N2Y8 1516 aa23.3■■□□□ 1.32
CYB561A3-208ENST00000536915 KIF27Q86VH2 1401 aa23.29■■□□□ 1.32
CYB561A3-208ENST00000536915 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms