RNA–Protein interactions for RNA: ENST00000535174.5

DDB1-205, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-205ENST00000535174 NISCHQ9Y2I1 1504 aa41.44■■■■■ 4.23
DDB1-205ENST00000535174 CCDC180Q9P1Z9 1646 aa37.25■■■■□ 3.55
DDB1-205ENST00000535174 ABCC9O60706 1549 aa37.15■■■■□ 3.54
DDB1-205ENST00000535174 RB1CC1Q8TDY2 1594 aa35.42■■■■□ 3.26
DDB1-205ENST00000535174 NACADO15069 1562 aa35.15■■■■□ 3.22
DDB1-205ENST00000535174 DCAF8L2P0C7V8 631 aa34.97■■■■□ 3.19
DDB1-205ENST00000535174 DNAJC5BQ9UF47 199 aa34.64■■■■□ 3.14
DDB1-205ENST00000535174 MYO15BQ96JP2 1530 aa34.64■■■■□ 3.14
DDB1-205ENST00000535174 UNC13AQ9UPW8 1703 aa34.64■■■■□ 3.14
DDB1-205ENST00000535174 PABPN1Q86U42 306 aaKnown RBP eCLIP34.54■■■■□ 3.12
DDB1-205ENST00000535174 ZCCHC6Q5VYS8 1495 aaKnown RBP34.38■■■■□ 3.09
DDB1-205ENST00000535174 BICRAQ9NZM4 1560 aa34.32■■■■□ 3.08
DDB1-205ENST00000535174 DCAF1Q9Y4B6 1507 aa34.23■■■■□ 3.07
DDB1-205ENST00000535174 SCRIBQ14160 1630 aa33.97■■■■□ 3.03
DDB1-205ENST00000535174 SHROOM4Q9ULL8 1493 aa33.91■■■■□ 3.02
DDB1-205ENST00000535174 CC2D2AQ9P2K1 1620 aa33.57■■■□□ 2.97
DDB1-205ENST00000535174 EIF4G1Q04637 1599 aaKnown RBP33.52■■■□□ 2.96
DDB1-205ENST00000535174 CECR2Q9BXF3 1484 aa33.45■■■□□ 2.95
DDB1-205ENST00000535174 NCAPD3P42695 1498 aa32.38■■■□□ 2.77
DDB1-205ENST00000535174 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
DDB1-205ENST00000535174 ATAD2BQ9ULI0 1458 aa32.32■■■□□ 2.76
DDB1-205ENST00000535174 SMARCA2P51531 1590 aa32.3■■■□□ 2.76
DDB1-205ENST00000535174 HMGXB3Q12766 1538 aa32.24■■■□□ 2.75
DDB1-205ENST00000535174 BAZ1AQ9NRL2 1556 aaPredicted RBP32.21■■■□□ 2.75
DDB1-205ENST00000535174 ERCC6Q03468 1493 aa32.13■■■□□ 2.73
DDB1-205ENST00000535174 BAZ1BQ9UIG0 1483 aaKnown RBP32.09■■■□□ 2.73
DDB1-205ENST00000535174 PEG3Q9GZU2 1588 aa32.01■■■□□ 2.71
DDB1-205ENST00000535174 CUX2O14529 1486 aa32■■■□□ 2.71
DDB1-205ENST00000535174 MROH2BQ7Z745 1585 aa31.94■■■□□ 2.7
DDB1-205ENST00000535174 NESP48681 1621 aa31.91■■■□□ 2.7
DDB1-205ENST00000535174 DNAJC5Q9H3Z4 198 aa31.8■■■□□ 2.68
DDB1-205ENST00000535174 LAMC3Q9Y6N6 1575 aa31.74■■■□□ 2.67
DDB1-205ENST00000535174 THOC2Q8NI27 1593 aaKnown RBP31.63■■■□□ 2.65
DDB1-205ENST00000535174 WIZO95785 1651 aa31.6■■■□□ 2.65
DDB1-205ENST00000535174 KIF21AQ7Z4S6 1674 aa31.58■■■□□ 2.65
DDB1-205ENST00000535174 PDS5BQ9NTI5 1447 aa31.52■■■□□ 2.64
DDB1-205ENST00000535174 CADPSQ9ULU8 1353 aa31.42■■■□□ 2.62
DDB1-205ENST00000535174 MRC2Q9UBG0 1479 aa31.27■■■□□ 2.6
DDB1-205ENST00000535174 RSF1Q96T23 1441 aaPredicted RBP31.26■■■□□ 2.6
DDB1-205ENST00000535174 TOP2AP11388 1531 aaKnown RBP31.21■■■□□ 2.59
DDB1-205ENST00000535174 WDR62O43379 1518 aa31.19■■■□□ 2.58
DDB1-205ENST00000535174 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
DDB1-205ENST00000535174 FANCD2Q9BXW9 1451 aa31.11■■■□□ 2.57
DDB1-205ENST00000535174 CFTRP13569 1480 aa31.08■■■□□ 2.57
DDB1-205ENST00000535174 PRDM2Q13029 1718 aa30.92■■■□□ 2.54
DDB1-205ENST00000535174 URB2Q14146 1524 aaKnown RBP30.83■■■□□ 2.53
DDB1-205ENST00000535174 CCDC88BA6NC98 1476 aa30.79■■■□□ 2.52
DDB1-205ENST00000535174 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
DDB1-205ENST00000535174 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
DDB1-205ENST00000535174 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
DDB1-205ENST00000535174 OSCARQ8IYS5 282 aa30.48■■■□□ 2.47
DDB1-205ENST00000535174 ABCC8Q09428 1581 aa30.46■■■□□ 2.47
DDB1-205ENST00000535174 DNMBPQ6XZF7 1577 aa30.46■■■□□ 2.47
DDB1-205ENST00000535174 ZNF608Q9ULD9 1512 aaPredicted RBP30.44■■■□□ 2.46
DDB1-205ENST00000535174 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
DDB1-205ENST00000535174 TARBP1Q13395 1621 aaKnown RBP30.25■■■□□ 2.43
DDB1-205ENST00000535174 POLA1P09884 1462 aaPredicted RBP30.22■■■□□ 2.43
DDB1-205ENST00000535174 RIMBP3CA6NJZ7 1639 aa30.18■■■□□ 2.42
DDB1-205ENST00000535174 RIMBP3BA6NNM3 1639 aa30.18■■■□□ 2.42
DDB1-205ENST00000535174 RIMBP3Q9UFD9 1639 aa30.18■■■□□ 2.42
DDB1-205ENST00000535174 AQRO60306 1485 aaKnown RBP eCLIP30.16■■■□□ 2.423e-7■■■□□ 16.8
DDB1-205ENST00000535174 CHD1O14646 1710 aa30.14■■■□□ 2.42
DDB1-205ENST00000535174 RAD54L2Q9Y4B4 1467 aa30.09■■■□□ 2.41
DDB1-205ENST00000535174 ARHGEF11O15085 1522 aa30.06■■■□□ 2.4
DDB1-205ENST00000535174 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
DDB1-205ENST00000535174 SOGA1O94964 1423 aa30.05■■■□□ 2.4
DDB1-205ENST00000535174 CUX1P39880 1505 aa30.01■■■□□ 2.4
DDB1-205ENST00000535174 FBLN2P98095 1184 aa30■■■□□ 2.39
DDB1-205ENST00000535174 WDR97A6NE52 1622 aa30■■■□□ 2.39
DDB1-205ENST00000535174 TDRD9Q8NDG6 1382 aaKnown RBP29.98■■■□□ 2.39
DDB1-205ENST00000535174 SUPT5HO00267 1087 aaKnown RBP29.96■■■□□ 2.39
DDB1-205ENST00000535174 SNAPC4Q5SXM2 1469 aa29.92■■■□□ 2.38
DDB1-205ENST00000535174 GRIN2BQ13224 1484 aa29.82■■■□□ 2.36
DDB1-205ENST00000535174 MAGI1Q96QZ7 1491 aaPredicted RBP29.82■■■□□ 2.36
DDB1-205ENST00000535174 PBRM1Q86U86 1689 aa29.8■■■□□ 2.36
DDB1-205ENST00000535174 CYB5RLQ6IPT4 315 aa29.78■■■□□ 2.36
DDB1-205ENST00000535174 SYNJ1O43426 1573 aa29.77■■■□□ 2.36
DDB1-205ENST00000535174 ARAP1Q96P48 1450 aa29.76■■■□□ 2.35
DDB1-205ENST00000535174 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
DDB1-205ENST00000535174 CLASP1Q7Z460 1538 aa29.73■■■□□ 2.35
DDB1-205ENST00000535174 SYNJ2O15056 1496 aa29.72■■■□□ 2.35
DDB1-205ENST00000535174 GAPVD1Q14C86 1478 aa29.72■■■□□ 2.35
DDB1-205ENST00000535174 ABCA5Q8WWZ7 1642 aa29.69■■■□□ 2.34
DDB1-205ENST00000535174 ABCA10Q8WWZ4 1543 aa29.69■■■□□ 2.34
DDB1-205ENST00000535174 BIVM-ERCC5R4GMW8 1640 aa29.6■■■□□ 2.33
DDB1-205ENST00000535174 WRNQ14191 1432 aaPredicted RBP eCLIP29.59■■■□□ 2.33
DDB1-205ENST00000535174 TOP2BQ02880 1626 aa29.58■■■□□ 2.33
DDB1-205ENST00000535174 TRHP20396 242 aaPredicted RBP29.5■■■□□ 2.31
DDB1-205ENST00000535174 ADAMTS12P58397 1594 aa29.48■■■□□ 2.31
DDB1-205ENST00000535174 GRIN2AQ12879 1464 aa29.45■■■□□ 2.31
DDB1-205ENST00000535174 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
DDB1-205ENST00000535174 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
DDB1-205ENST00000535174 FHAD1B1AJZ9 1412 aa29.33■■■□□ 2.29
DDB1-205ENST00000535174 NUP160Q12769 1436 aa29.3■■■□□ 2.28
DDB1-205ENST00000535174 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.27
DDB1-205ENST00000535174 SHROOM2Q13796 1616 aa29.21■■■□□ 2.27
DDB1-205ENST00000535174 RUSC2Q8N2Y8 1516 aa29.08■■■□□ 2.25
DDB1-205ENST00000535174 PRG4Q92954 1404 aaPredicted RBP29.03■■■□□ 2.24
DDB1-205ENST00000535174 CUL7Q14999 1698 aa28.99■■■□□ 2.23
DDB1-205ENST00000535174 KIF27Q86VH2 1401 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms