RNA–Protein interactions for RNA: ENST00000535131.1

UBC-202, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-202ENST00000535131 NISCHQ9Y2I1 1504 aa31.9■■■□□ 2.7
UBC-202ENST00000535131 ABCC9O60706 1549 aa28.62■■■□□ 2.17
UBC-202ENST00000535131 CCDC180Q9P1Z9 1646 aa28.6■■■□□ 2.17
UBC-202ENST00000535131 RB1CC1Q8TDY2 1594 aa27.13■■□□□ 1.93
UBC-202ENST00000535131 NACADO15069 1562 aa26.94■■□□□ 1.9
UBC-202ENST00000535131 DNAJC5BQ9UF47 199 aa26.91■■□□□ 1.9
UBC-202ENST00000535131 UNC13AQ9UPW8 1703 aa26.86■■□□□ 1.89
UBC-202ENST00000535131 DCAF8L2P0C7V8 631 aa26.77■■□□□ 1.88
UBC-202ENST00000535131 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
UBC-202ENST00000535131 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
UBC-202ENST00000535131 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
UBC-202ENST00000535131 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
UBC-202ENST00000535131 DCAF1Q9Y4B6 1507 aa26.25■■□□□ 1.79
UBC-202ENST00000535131 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
UBC-202ENST00000535131 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
UBC-202ENST00000535131 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
UBC-202ENST00000535131 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
UBC-202ENST00000535131 CECR2Q9BXF3 1484 aa25.69■■□□□ 1.7
UBC-202ENST00000535131 SMARCA4P51532 1647 aa24.93■■□□□ 1.58
UBC-202ENST00000535131 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.57
UBC-202ENST00000535131 NCAPD3P42695 1498 aa24.88■■□□□ 1.57
UBC-202ENST00000535131 HMGXB3Q12766 1538 aa24.73■■□□□ 1.55
UBC-202ENST00000535131 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
UBC-202ENST00000535131 NESP48681 1621 aa24.68■■□□□ 1.54
UBC-202ENST00000535131 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
UBC-202ENST00000535131 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
UBC-202ENST00000535131 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
UBC-202ENST00000535131 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.53
UBC-202ENST00000535131 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
UBC-202ENST00000535131 CUX2O14529 1486 aa24.48■■□□□ 1.51
UBC-202ENST00000535131 DNAJC5Q9H3Z4 198 aa24.44■■□□□ 1.5
UBC-202ENST00000535131 WIZO95785 1651 aa24.43■■□□□ 1.5
UBC-202ENST00000535131 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
UBC-202ENST00000535131 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
UBC-202ENST00000535131 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.48
UBC-202ENST00000535131 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
UBC-202ENST00000535131 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
UBC-202ENST00000535131 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
UBC-202ENST00000535131 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
UBC-202ENST00000535131 MRC2Q9UBG0 1479 aa23.98■■□□□ 1.43
UBC-202ENST00000535131 WDR62O43379 1518 aa23.98■■□□□ 1.43
UBC-202ENST00000535131 CFTRP13569 1480 aa23.89■■□□□ 1.42
UBC-202ENST00000535131 FANCD2Q9BXW9 1451 aa23.89■■□□□ 1.42
UBC-202ENST00000535131 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
UBC-202ENST00000535131 PRDM2Q13029 1718 aa23.81■■□□□ 1.4
UBC-202ENST00000535131 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
UBC-202ENST00000535131 CCDC88BA6NC98 1476 aa23.74■■□□□ 1.39
UBC-202ENST00000535131 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
UBC-202ENST00000535131 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
UBC-202ENST00000535131 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
UBC-202ENST00000535131 EIF4G3O43432 1585 aaKnown RBP23.38■■□□□ 1.33
UBC-202ENST00000535131 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
UBC-202ENST00000535131 TARBP1Q13395 1621 aaKnown RBP23.36■■□□□ 1.33
UBC-202ENST00000535131 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
UBC-202ENST00000535131 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
UBC-202ENST00000535131 CHD1O14646 1710 aa23.27■■□□□ 1.32
UBC-202ENST00000535131 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
UBC-202ENST00000535131 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
UBC-202ENST00000535131 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
UBC-202ENST00000535131 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
UBC-202ENST00000535131 AQRO60306 1485 aaKnown RBP eCLIP23.24■■□□□ 1.318e-18■■■■■ 28.7
UBC-202ENST00000535131 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
UBC-202ENST00000535131 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
UBC-202ENST00000535131 CUX1P39880 1505 aa23.18■■□□□ 1.3
UBC-202ENST00000535131 ARHGEF11O15085 1522 aa23.13■■□□□ 1.29
UBC-202ENST00000535131 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
UBC-202ENST00000535131 WDR97A6NE52 1622 aa23.08■■□□□ 1.29
UBC-202ENST00000535131 TDRD9Q8NDG6 1382 aaKnown RBP23.07■■□□□ 1.28
UBC-202ENST00000535131 SOGA1O94964 1423 aa23.05■■□□□ 1.28
UBC-202ENST00000535131 SUPT5HO00267 1087 aaKnown RBP23■■□□□ 1.27
UBC-202ENST00000535131 SNAPC4Q5SXM2 1469 aa22.99■■□□□ 1.27
UBC-202ENST00000535131 PBRM1Q86U86 1689 aa22.96■■□□□ 1.27
UBC-202ENST00000535131 ARAP1Q96P48 1450 aa22.94■■□□□ 1.26
UBC-202ENST00000535131 FBLN2P98095 1184 aa22.93■■□□□ 1.26
UBC-202ENST00000535131 CLASP1Q7Z460 1538 aa22.92■■□□□ 1.26
UBC-202ENST00000535131 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
UBC-202ENST00000535131 CYB5RLQ6IPT4 315 aa22.85■■□□□ 1.25
UBC-202ENST00000535131 GRIN2BQ13224 1484 aa22.84■■□□□ 1.25
UBC-202ENST00000535131 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
UBC-202ENST00000535131 MAGI1Q96QZ7 1491 aaPredicted RBP22.82■■□□□ 1.24
UBC-202ENST00000535131 ABCA10Q8WWZ4 1543 aa22.81■■□□□ 1.24
UBC-202ENST00000535131 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
UBC-202ENST00000535131 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
UBC-202ENST00000535131 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
UBC-202ENST00000535131 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
UBC-202ENST00000535131 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
UBC-202ENST00000535131 ERCC6L2Q5T890 1561 aa22.7■■□□□ 1.22
UBC-202ENST00000535131 ADAMTS12P58397 1594 aa22.68■■□□□ 1.22
UBC-202ENST00000535131 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
UBC-202ENST00000535131 CEP170Q5SW79 1584 aa22.64■■□□□ 1.22
UBC-202ENST00000535131 GRIN2AQ12879 1464 aa22.61■■□□□ 1.21
UBC-202ENST00000535131 NUP160Q12769 1436 aa22.54■■□□□ 1.2
UBC-202ENST00000535131 SHROOM2Q13796 1616 aa22.51■■□□□ 1.19
UBC-202ENST00000535131 ERICH3Q5RHP9 1530 aa22.49■■□□□ 1.19
UBC-202ENST00000535131 TRHP20396 242 aaPredicted RBP22.49■■□□□ 1.19
UBC-202ENST00000535131 FHAD1B1AJZ9 1412 aa22.47■■□□□ 1.19
UBC-202ENST00000535131 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
UBC-202ENST00000535131 KIF13AQ9H1H9 1805 aa22.29■■□□□ 1.16
UBC-202ENST00000535131 PRG4Q92954 1404 aaPredicted RBP22.28■■□□□ 1.16
UBC-202ENST00000535131 IGF1RP08069 1367 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms