RNA–Protein interactions for RNA: ENST00000534950.1

C1RL-203, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-203ENST00000534950 NISCHQ9Y2I1 1504 aa45.92■■■■■ 4.94
C1RL-203ENST00000534950 CCDC180Q9P1Z9 1646 aa41.16■■■■■ 4.18
C1RL-203ENST00000534950 ABCC9O60706 1549 aa40.88■■■■■ 4.14
C1RL-203ENST00000534950 RB1CC1Q8TDY2 1594 aa39.01■■■■□ 3.84
C1RL-203ENST00000534950 NACADO15069 1562 aa38.77■■■■□ 3.8
C1RL-203ENST00000534950 DCAF8L2P0C7V8 631 aa38.65■■■■□ 3.78
C1RL-203ENST00000534950 UNC13AQ9UPW8 1703 aa38.27■■■■□ 3.72
C1RL-203ENST00000534950 MYO15BQ96JP2 1530 aa38.25■■■■□ 3.71
C1RL-203ENST00000534950 ZCCHC6Q5VYS8 1495 aaKnown RBP38.13■■■■□ 3.69
C1RL-203ENST00000534950 PABPN1Q86U42 306 aaKnown RBP eCLIP38.05■■■■□ 3.68
C1RL-203ENST00000534950 DNAJC5BQ9UF47 199 aa38■■■■□ 3.67
C1RL-203ENST00000534950 DCAF1Q9Y4B6 1507 aa37.89■■■■□ 3.66
C1RL-203ENST00000534950 BICRAQ9NZM4 1560 aa37.88■■■■□ 3.65
C1RL-203ENST00000534950 SCRIBQ14160 1630 aa37.58■■■■□ 3.61
C1RL-203ENST00000534950 SHROOM4Q9ULL8 1493 aa37.29■■■■□ 3.56
C1RL-203ENST00000534950 CC2D2AQ9P2K1 1620 aa36.96■■■■□ 3.51
C1RL-203ENST00000534950 EIF4G1Q04637 1599 aaKnown RBP36.92■■■■□ 3.5
C1RL-203ENST00000534950 CECR2Q9BXF3 1484 aa36.75■■■■□ 3.47
C1RL-203ENST00000534950 SMARCA4P51532 1647 aa35.83■■■■□ 3.33
C1RL-203ENST00000534950 NCAPD3P42695 1498 aa35.73■■■■□ 3.31
C1RL-203ENST00000534950 ATAD2BQ9ULI0 1458 aa35.71■■■■□ 3.31
C1RL-203ENST00000534950 SMARCA2P51531 1590 aa35.65■■■■□ 3.3
C1RL-203ENST00000534950 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
C1RL-203ENST00000534950 HMGXB3Q12766 1538 aa35.57■■■■□ 3.28
C1RL-203ENST00000534950 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
C1RL-203ENST00000534950 BAZ1BQ9UIG0 1483 aaKnown RBP35.42■■■■□ 3.26
C1RL-203ENST00000534950 PEG3Q9GZU2 1588 aa35.4■■■■□ 3.26
C1RL-203ENST00000534950 ERCC6Q03468 1493 aa35.27■■■■□ 3.24
C1RL-203ENST00000534950 NESP48681 1621 aa35.21■■■■□ 3.23
C1RL-203ENST00000534950 WIZO95785 1651 aa35.08■■■■□ 3.21
C1RL-203ENST00000534950 CUX2O14529 1486 aa35.04■■■■□ 3.2
C1RL-203ENST00000534950 LAMC3Q9Y6N6 1575 aa34.96■■■■□ 3.19
C1RL-203ENST00000534950 KIF21AQ7Z4S6 1674 aa34.86■■■■□ 3.17
C1RL-203ENST00000534950 THOC2Q8NI27 1593 aaKnown RBP34.82■■■■□ 3.16
C1RL-203ENST00000534950 RSF1Q96T23 1441 aaPredicted RBP34.73■■■■□ 3.15
C1RL-203ENST00000534950 PDS5BQ9NTI5 1447 aa34.69■■■■□ 3.14
C1RL-203ENST00000534950 CADPSQ9ULU8 1353 aa34.66■■■■□ 3.14
C1RL-203ENST00000534950 DNAJC5Q9H3Z4 198 aa34.63■■■■□ 3.13
C1RL-203ENST00000534950 TOP2AP11388 1531 aaKnown RBP34.6■■■■□ 3.13
C1RL-203ENST00000534950 MRC2Q9UBG0 1479 aa34.44■■■■□ 3.1
C1RL-203ENST00000534950 CEP164Q9UPV0 1460 aa34.37■■■■□ 3.09
C1RL-203ENST00000534950 WDR62O43379 1518 aa34.35■■■■□ 3.09
C1RL-203ENST00000534950 CFTRP13569 1480 aa34.35■■■■□ 3.09
C1RL-203ENST00000534950 FANCD2Q9BXW9 1451 aa34.33■■■■□ 3.09
C1RL-203ENST00000534950 PRDM2Q13029 1718 aa34.23■■■■□ 3.07
C1RL-203ENST00000534950 CCDC88BA6NC98 1476 aa34.16■■■■□ 3.06
C1RL-203ENST00000534950 URB2Q14146 1524 aaKnown RBP34.06■■■■□ 3.04
C1RL-203ENST00000534950 TOPBP1Q92547 1522 aa33.74■■■□□ 2.99
C1RL-203ENST00000534950 DNMBPQ6XZF7 1577 aa33.66■■■□□ 2.98
C1RL-203ENST00000534950 IFT140Q96RY7 1462 aa33.63■■■□□ 2.97
C1RL-203ENST00000534950 ABCC8Q09428 1581 aa33.6■■■□□ 2.97
C1RL-203ENST00000534950 ZNF608Q9ULD9 1512 aaPredicted RBP33.6■■■□□ 2.97
C1RL-203ENST00000534950 EIF4G3O43432 1585 aaKnown RBP33.5■■■□□ 2.95
C1RL-203ENST00000534950 SUPT5HO00267 1087 aaKnown RBP33.45■■■□□ 2.95
C1RL-203ENST00000534950 TARBP1Q13395 1621 aaKnown RBP33.44■■■□□ 2.94
C1RL-203ENST00000534950 OSCARQ8IYS5 282 aa33.43■■■□□ 2.94
C1RL-203ENST00000534950 POLA1P09884 1462 aaPredicted RBP33.4■■■□□ 2.94
C1RL-203ENST00000534950 TRIM41Q8WV44 630 aa33.37■■■□□ 2.93
C1RL-203ENST00000534950 AQRO60306 1485 aaKnown RBP eCLIP33.31■■■□□ 2.92
C1RL-203ENST00000534950 RAD54L2Q9Y4B4 1467 aa33.29■■■□□ 2.92
C1RL-203ENST00000534950 CUX1P39880 1505 aa33.28■■■□□ 2.92
C1RL-203ENST00000534950 FGD5Q6ZNL6 1462 aa33.25■■■□□ 2.91
C1RL-203ENST00000534950 CHD1O14646 1710 aa33.25■■■□□ 2.91
C1RL-203ENST00000534950 SOGA1O94964 1423 aa33.21■■■□□ 2.91
C1RL-203ENST00000534950 RIMBP3CA6NJZ7 1639 aa33.13■■■□□ 2.89
C1RL-203ENST00000534950 RIMBP3BA6NNM3 1639 aa33.13■■■□□ 2.89
C1RL-203ENST00000534950 RIMBP3Q9UFD9 1639 aa33.13■■■□□ 2.89
C1RL-203ENST00000534950 TDRD9Q8NDG6 1382 aaKnown RBP33.13■■■□□ 2.89
C1RL-203ENST00000534950 WDR97A6NE52 1622 aa33.08■■■□□ 2.89
C1RL-203ENST00000534950 FBLN2P98095 1184 aa33.03■■■□□ 2.88
C1RL-203ENST00000534950 SNAPC4Q5SXM2 1469 aa33.01■■■□□ 2.88
C1RL-203ENST00000534950 ARHGEF11O15085 1522 aa33.01■■■□□ 2.87
C1RL-203ENST00000534950 PBRM1Q86U86 1689 aa32.96■■■□□ 2.87
C1RL-203ENST00000534950 GRIN2BQ13224 1484 aa32.91■■■□□ 2.86
C1RL-203ENST00000534950 MAGI1Q96QZ7 1491 aaPredicted RBP32.88■■■□□ 2.85
C1RL-203ENST00000534950 ABCA5Q8WWZ7 1642 aa32.85■■■□□ 2.85
C1RL-203ENST00000534950 BIVM-ERCC5R4GMW8 1640 aa32.85■■■□□ 2.85
C1RL-203ENST00000534950 ABCA10Q8WWZ4 1543 aa32.84■■■□□ 2.85
C1RL-203ENST00000534950 GAPVD1Q14C86 1478 aa32.84■■■□□ 2.85
C1RL-203ENST00000534950 SYNJ1O43426 1573 aa32.83■■■□□ 2.85
C1RL-203ENST00000534950 TOP2BQ02880 1626 aa32.81■■■□□ 2.84
C1RL-203ENST00000534950 WRNQ14191 1432 aaPredicted RBP eCLIP32.78■■■□□ 2.84
C1RL-203ENST00000534950 CHMP7Q8WUX9 453 aaPredicted RBP32.78■■■□□ 2.84
C1RL-203ENST00000534950 SYNJ2O15056 1496 aa32.77■■■□□ 2.84
C1RL-203ENST00000534950 CLASP1Q7Z460 1538 aa32.76■■■□□ 2.83
C1RL-203ENST00000534950 ARAP1Q96P48 1450 aa32.7■■■□□ 2.83
C1RL-203ENST00000534950 CYB5RLQ6IPT4 315 aa32.68■■■□□ 2.82
C1RL-203ENST00000534950 ADAMTS12P58397 1594 aa32.6■■■□□ 2.81
C1RL-203ENST00000534950 GRIN2AQ12879 1464 aa32.51■■■□□ 2.79
C1RL-203ENST00000534950 ERICH3Q5RHP9 1530 aa32.45■■■□□ 2.78
C1RL-203ENST00000534950 CEP170Q5SW79 1584 aa32.43■■■□□ 2.78
C1RL-203ENST00000534950 FHAD1B1AJZ9 1412 aa32.41■■■□□ 2.78
C1RL-203ENST00000534950 NUP160Q12769 1436 aa32.35■■■□□ 2.77
C1RL-203ENST00000534950 ERCC6L2Q5T890 1561 aa32.32■■■□□ 2.76
C1RL-203ENST00000534950 TRHP20396 242 aaPredicted RBP32.27■■■□□ 2.76
C1RL-203ENST00000534950 SHROOM2Q13796 1616 aa32.25■■■□□ 2.75
C1RL-203ENST00000534950 RUSC2Q8N2Y8 1516 aa32.14■■■□□ 2.74
C1RL-203ENST00000534950 KIF27Q86VH2 1401 aa32.12■■■□□ 2.73
C1RL-203ENST00000534950 CUL7Q14999 1698 aa32.1■■■□□ 2.73
C1RL-203ENST00000534950 PRG4Q92954 1404 aaPredicted RBP32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms