RNA–Protein interactions for RNA: ENST00000534772.1

COG4-208, Transcript of component of oligomeric golgi complex 4, humanhuman

TSL 3

Gene COG4, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG4-208ENST00000534772 NISCHQ9Y2I1 1504 aa16.84■□□□□ 0.29
COG4-208ENST00000534772 AEBP2Q6ZN18 517 aaPredicted RBP16.53■□□□□ 0.24
COG4-208ENST00000534772 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
COG4-208ENST00000534772 CCDC180Q9P1Z9 1646 aa15.07■□□□□ 0
COG4-208ENST00000534772 ABCC9O60706 1549 aa14.87□□□□□ -0.03
COG4-208ENST00000534772 PHF23Q9BUL5 403 aaPredicted RBP14.46□□□□□ -0.09
COG4-208ENST00000534772 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
COG4-208ENST00000534772 NACADO15069 1562 aa14.17□□□□□ -0.14
COG4-208ENST00000534772 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
COG4-208ENST00000534772 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
COG4-208ENST00000534772 ZCCHC6Q5VYS8 1495 aaKnown RBP14□□□□□ -0.17
COG4-208ENST00000534772 UNC13AQ9UPW8 1703 aa13.95□□□□□ -0.18
COG4-208ENST00000534772 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
COG4-208ENST00000534772 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
COG4-208ENST00000534772 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
COG4-208ENST00000534772 BICRAQ9NZM4 1560 aa13.78□□□□□ -0.2
COG4-208ENST00000534772 SCRIBQ14160 1630 aa13.76□□□□□ -0.21
COG4-208ENST00000534772 DNAJC5BQ9UF47 199 aa13.68□□□□□ -0.22
COG4-208ENST00000534772 SHROOM4Q9ULL8 1493 aa13.63□□□□□ -0.23
COG4-208ENST00000534772 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
COG4-208ENST00000534772 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
COG4-208ENST00000534772 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
COG4-208ENST00000534772 PLPPR3Q6T4P5 718 aa13.35□□□□□ -0.27
COG4-208ENST00000534772 SMARCA4P51532 1647 aa13.12□□□□□ -0.31
COG4-208ENST00000534772 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
COG4-208ENST00000534772 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
COG4-208ENST00000534772 ATAD2BQ9ULI0 1458 aa13.04□□□□□ -0.32
COG4-208ENST00000534772 NCAPD3P42695 1498 aa13.04□□□□□ -0.32
COG4-208ENST00000534772 HMGXB3Q12766 1538 aa13.01□□□□□ -0.33
COG4-208ENST00000534772 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
COG4-208ENST00000534772 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
COG4-208ENST00000534772 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
COG4-208ENST00000534772 FOXD1Q16676 465 aa12.93□□□□□ -0.34
COG4-208ENST00000534772 WIZO95785 1651 aa12.86□□□□□ -0.35
COG4-208ENST00000534772 ERCC6Q03468 1493 aa12.86□□□□□ -0.35
COG4-208ENST00000534772 NESP48681 1621 aa12.81□□□□□ -0.36
COG4-208ENST00000534772 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.37
COG4-208ENST00000534772 RSF1Q96T23 1441 aaPredicted RBP12.76□□□□□ -0.37
COG4-208ENST00000534772 CUX2O14529 1486 aa12.72□□□□□ -0.37
COG4-208ENST00000534772 TOP2AP11388 1531 aaKnown RBP12.71□□□□□ -0.38
COG4-208ENST00000534772 KIF21AQ7Z4S6 1674 aa12.7□□□□□ -0.38
COG4-208ENST00000534772 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
COG4-208ENST00000534772 ADRA2BP18089 450 aa12.68□□□□□ -0.38
COG4-208ENST00000534772 PDS5BQ9NTI5 1447 aa12.68□□□□□ -0.38
COG4-208ENST00000534772 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
COG4-208ENST00000534772 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
COG4-208ENST00000534772 MRC2Q9UBG0 1479 aa12.57□□□□□ -0.4
COG4-208ENST00000534772 CEP164Q9UPV0 1460 aa12.57□□□□□ -0.4
COG4-208ENST00000534772 CFTRP13569 1480 aa12.56□□□□□ -0.4
COG4-208ENST00000534772 PRDM2Q13029 1718 aa12.56□□□□□ -0.4
COG4-208ENST00000534772 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
COG4-208ENST00000534772 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
COG4-208ENST00000534772 WDR62O43379 1518 aa12.52□□□□□ -0.41
COG4-208ENST00000534772 DNAJC5Q9H3Z4 198 aa12.44□□□□□ -0.42
COG4-208ENST00000534772 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
COG4-208ENST00000534772 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
COG4-208ENST00000534772 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
COG4-208ENST00000534772 DNMBPQ6XZF7 1577 aa12.33□□□□□ -0.44
COG4-208ENST00000534772 ABCC8Q09428 1581 aa12.32□□□□□ -0.44
COG4-208ENST00000534772 IFT140Q96RY7 1462 aa12.29□□□□□ -0.44
COG4-208ENST00000534772 ZNF608Q9ULD9 1512 aaPredicted RBP12.24□□□□□ -0.45
COG4-208ENST00000534772 EIF4G3O43432 1585 aaKnown RBP12.23□□□□□ -0.45
COG4-208ENST00000534772 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
COG4-208ENST00000534772 POLA1P09884 1462 aaPredicted RBP12.21□□□□□ -0.45
COG4-208ENST00000534772 TARBP1Q13395 1621 aaKnown RBP12.21□□□□□ -0.46
COG4-208ENST00000534772 CUX1P39880 1505 aa12.19□□□□□ -0.46
COG4-208ENST00000534772 FGD5Q6ZNL6 1462 aa12.18□□□□□ -0.46
COG4-208ENST00000534772 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
COG4-208ENST00000534772 SOGA1O94964 1423 aa12.16□□□□□ -0.46
COG4-208ENST00000534772 AQRO60306 1485 aaKnown RBP eCLIP12.15□□□□□ -0.46
COG4-208ENST00000534772 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
COG4-208ENST00000534772 CHD1O14646 1710 aa12.13□□□□□ -0.47
COG4-208ENST00000534772 WDR97A6NE52 1622 aa12.11□□□□□ -0.47
COG4-208ENST00000534772 TDRD9Q8NDG6 1382 aaKnown RBP12.11□□□□□ -0.47
COG4-208ENST00000534772 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
COG4-208ENST00000534772 FBLN2P98095 1184 aa12.07□□□□□ -0.48
COG4-208ENST00000534772 WRNQ14191 1432 aaPredicted RBP eCLIP12.07□□□□□ -0.48
COG4-208ENST00000534772 TOP2BQ02880 1626 aa12.07□□□□□ -0.48
COG4-208ENST00000534772 PBRM1Q86U86 1689 aa12.06□□□□□ -0.48
COG4-208ENST00000534772 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
COG4-208ENST00000534772 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
COG4-208ENST00000534772 TRIM41Q8WV44 630 aa12.05□□□□□ -0.48
COG4-208ENST00000534772 GRIN2BQ13224 1484 aa12.05□□□□□ -0.48
COG4-208ENST00000534772 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
COG4-208ENST00000534772 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
COG4-208ENST00000534772 ABCA5Q8WWZ7 1642 aa12.03□□□□□ -0.48
COG4-208ENST00000534772 GAPVD1Q14C86 1478 aa12.02□□□□□ -0.48
COG4-208ENST00000534772 RIMBP3CA6NJZ7 1639 aa12.02□□□□□ -0.49
COG4-208ENST00000534772 RIMBP3BA6NNM3 1639 aa12.02□□□□□ -0.49
COG4-208ENST00000534772 RIMBP3Q9UFD9 1639 aa12.02□□□□□ -0.49
COG4-208ENST00000534772 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
COG4-208ENST00000534772 ARHGEF11O15085 1522 aa11.99□□□□□ -0.49
COG4-208ENST00000534772 SYNJ2O15056 1496 aa11.98□□□□□ -0.49
COG4-208ENST00000534772 ADAMTS12P58397 1594 aa11.93□□□□□ -0.5
COG4-208ENST00000534772 CLASP1Q7Z460 1538 aa11.93□□□□□ -0.5
COG4-208ENST00000534772 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
COG4-208ENST00000534772 GRIN2AQ12879 1464 aa11.89□□□□□ -0.51
COG4-208ENST00000534772 KCNA4P22459 653 aa11.88□□□□□ -0.51
COG4-208ENST00000534772 ARAP1Q96P48 1450 aa11.88□□□□□ -0.51
COG4-208ENST00000534772 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms