RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 NISCHQ9Y2I1 1504 aa38.88■■■■□ 3.81
VPS51-216ENST00000534591 CCDC180Q9P1Z9 1646 aa34.71■■■■□ 3.15
VPS51-216ENST00000534591 ABCC9O60706 1549 aa34.08■■■■□ 3.05
VPS51-216ENST00000534591 RB1CC1Q8TDY2 1594 aa32.67■■■□□ 2.82
VPS51-216ENST00000534591 NACADO15069 1562 aa32.58■■■□□ 2.81
VPS51-216ENST00000534591 ZCCHC6Q5VYS8 1495 aaKnown RBP32.49■■■□□ 2.79
VPS51-216ENST00000534591 DCAF8L2P0C7V8 631 aa32.44■■■□□ 2.78
VPS51-216ENST00000534591 MYO15BQ96JP2 1530 aa32.28■■■□□ 2.76
VPS51-216ENST00000534591 UNC13AQ9UPW8 1703 aa32.2■■■□□ 2.74
VPS51-216ENST00000534591 DCAF1Q9Y4B6 1507 aa32.11■■■□□ 2.73
VPS51-216ENST00000534591 BICRAQ9NZM4 1560 aa31.8■■■□□ 2.68
VPS51-216ENST00000534591 PABPN1Q86U42 306 aaKnown RBP eCLIP31.77■■■□□ 2.68
VPS51-216ENST00000534591 SCRIBQ14160 1630 aa31.7■■■□□ 2.66
VPS51-216ENST00000534591 DNAJC5BQ9UF47 199 aa31.42■■■□□ 2.62
VPS51-216ENST00000534591 SHROOM4Q9ULL8 1493 aa31.41■■■□□ 2.62
VPS51-216ENST00000534591 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
VPS51-216ENST00000534591 CC2D2AQ9P2K1 1620 aa30.86■■■□□ 2.53
VPS51-216ENST00000534591 CECR2Q9BXF3 1484 aa30.59■■■□□ 2.49
VPS51-216ENST00000534591 SMARCA4P51532 1647 aa30.27■■■□□ 2.44
VPS51-216ENST00000534591 SUPT5HO00267 1087 aaKnown RBP30.25■■■□□ 2.43
VPS51-216ENST00000534591 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
VPS51-216ENST00000534591 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
VPS51-216ENST00000534591 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
VPS51-216ENST00000534591 MROH2BQ7Z745 1585 aa30.02■■■□□ 2.4
VPS51-216ENST00000534591 SMARCA2P51531 1590 aa30■■■□□ 2.39
VPS51-216ENST00000534591 RSF1Q96T23 1441 aaPredicted RBP29.98■■■□□ 2.39
VPS51-216ENST00000534591 PEG3Q9GZU2 1588 aa29.94■■■□□ 2.38
VPS51-216ENST00000534591 HMGXB3Q12766 1538 aa29.93■■■□□ 2.38
VPS51-216ENST00000534591 BAZ1BQ9UIG0 1483 aaKnown RBP29.8■■■□□ 2.36
VPS51-216ENST00000534591 WIZO95785 1651 aa29.76■■■□□ 2.35
VPS51-216ENST00000534591 NESP48681 1621 aa29.5■■■□□ 2.31
VPS51-216ENST00000534591 TOP2AP11388 1531 aaKnown RBP29.34■■■□□ 2.29
VPS51-216ENST00000534591 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
VPS51-216ENST00000534591 ERCC6Q03468 1493 aa29.31■■■□□ 2.28
VPS51-216ENST00000534591 KIF21AQ7Z4S6 1674 aa29.24■■■□□ 2.27
VPS51-216ENST00000534591 THOC2Q8NI27 1593 aaKnown RBP29.12■■■□□ 2.25
VPS51-216ENST00000534591 CADPSQ9ULU8 1353 aa29.12■■■□□ 2.25
VPS51-216ENST00000534591 CUX2O14529 1486 aa29.05■■■□□ 2.24
VPS51-216ENST00000534591 PDS5BQ9NTI5 1447 aa29.02■■■□□ 2.24
VPS51-216ENST00000534591 CCDC88BA6NC98 1476 aa29.01■■■□□ 2.23
VPS51-216ENST00000534591 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
VPS51-216ENST00000534591 CFTRP13569 1480 aa28.97■■■□□ 2.23
VPS51-216ENST00000534591 PRDM2Q13029 1718 aa28.94■■■□□ 2.22
VPS51-216ENST00000534591 FANCD2Q9BXW9 1451 aa28.86■■■□□ 2.21
VPS51-216ENST00000534591 CEP164Q9UPV0 1460 aa28.83■■■□□ 2.21
VPS51-216ENST00000534591 MRC2Q9UBG0 1479 aa28.82■■■□□ 2.2
VPS51-216ENST00000534591 WDR62O43379 1518 aa28.79■■■□□ 2.2
VPS51-216ENST00000534591 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.18
VPS51-216ENST00000534591 TRIM41Q8WV44 630 aa28.5■■■□□ 2.15
VPS51-216ENST00000534591 TOPBP1Q92547 1522 aa28.41■■■□□ 2.14
VPS51-216ENST00000534591 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
VPS51-216ENST00000534591 ABCC8Q09428 1581 aa28.33■■■□□ 2.13
VPS51-216ENST00000534591 DNAJC5Q9H3Z4 198 aa28.32■■■□□ 2.12
VPS51-216ENST00000534591 WRNQ14191 1432 aaPredicted RBP eCLIP28.23■■■□□ 2.11
VPS51-216ENST00000534591 IFT140Q96RY7 1462 aa28.19■■■□□ 2.1
VPS51-216ENST00000534591 ZNF608Q9ULD9 1512 aaPredicted RBP28.19■■■□□ 2.1
VPS51-216ENST00000534591 TARBP1Q13395 1621 aaKnown RBP28.17■■■□□ 2.1
VPS51-216ENST00000534591 CUX1P39880 1505 aa28.17■■■□□ 2.1
VPS51-216ENST00000534591 POLA1P09884 1462 aaPredicted RBP28.16■■■□□ 2.1
VPS51-216ENST00000534591 EIF4G3O43432 1585 aaKnown RBP28.12■■■□□ 2.09
VPS51-216ENST00000534591 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
VPS51-216ENST00000534591 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
VPS51-216ENST00000534591 RAD54L2Q9Y4B4 1467 aa28.06■■■□□ 2.08
VPS51-216ENST00000534591 TOP2BQ02880 1626 aa28.01■■■□□ 2.07
VPS51-216ENST00000534591 BIVM-ERCC5R4GMW8 1640 aa27.98■■■□□ 2.07
VPS51-216ENST00000534591 WDR97A6NE52 1622 aa27.98■■■□□ 2.07
VPS51-216ENST00000534591 SOGA1O94964 1423 aa27.96■■■□□ 2.07
VPS51-216ENST00000534591 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.071e-7■■■■□ 21.3
VPS51-216ENST00000534591 EEA1Q15075 1411 aa27.9■■■□□ 2.06
VPS51-216ENST00000534591 FAM9AQ8IZU1 332 aaPredicted RBP27.89■■■□□ 2.06
VPS51-216ENST00000534591 CHD1O14646 1710 aa27.86■■■□□ 2.05
VPS51-216ENST00000534591 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
VPS51-216ENST00000534591 LOC105371045A0A1W2PR82 267 aa27.82■■■□□ 2.04
VPS51-216ENST00000534591 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
VPS51-216ENST00000534591 ABCA5Q8WWZ7 1642 aa27.76■■■□□ 2.03
VPS51-216ENST00000534591 ABCA10Q8WWZ4 1543 aa27.75■■■□□ 2.03
VPS51-216ENST00000534591 OSCARQ8IYS5 282 aa27.72■■■□□ 2.03
VPS51-216ENST00000534591 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
VPS51-216ENST00000534591 RUSC2Q8N2Y8 1516 aa27.69■■■□□ 2.02
VPS51-216ENST00000534591 CSRNP3Q8WYN3 585 aa27.68■■■□□ 2.02
VPS51-216ENST00000534591 GAPVD1Q14C86 1478 aa27.67■■■□□ 2.02
VPS51-216ENST00000534591 GRIN2BQ13224 1484 aa27.66■■■□□ 2.02
VPS51-216ENST00000534591 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
VPS51-216ENST00000534591 FBLN2P98095 1184 aa27.57■■■□□ 2
VPS51-216ENST00000534591 KIF27Q86VH2 1401 aa27.54■■■□□ 2
VPS51-216ENST00000534591 RIMBP3CA6NJZ7 1639 aa27.53■■■□□ 2
VPS51-216ENST00000534591 RIMBP3BA6NNM3 1639 aa27.53■■■□□ 2
VPS51-216ENST00000534591 RIMBP3Q9UFD9 1639 aa27.53■■■□□ 2
VPS51-216ENST00000534591 SYNJ2O15056 1496 aa27.52■■■□□ 2
VPS51-216ENST00000534591 ADAMTS12P58397 1594 aa27.49■■□□□ 1.99
VPS51-216ENST00000534591 KIF21BO75037 1637 aa27.48■■□□□ 1.99
VPS51-216ENST00000534591 ARHGEF11O15085 1522 aa27.45■■□□□ 1.98
VPS51-216ENST00000534591 CLASP1Q7Z460 1538 aa27.45■■□□□ 1.98
VPS51-216ENST00000534591 GOLGA3Q08378 1498 aa27.44■■□□□ 1.98
VPS51-216ENST00000534591 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
VPS51-216ENST00000534591 EHMT2Q96KQ7 1210 aa27.42■■□□□ 1.98
VPS51-216ENST00000534591 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
VPS51-216ENST00000534591 TNIKQ9UKE5 1360 aa27.37■■□□□ 1.97
VPS51-216ENST00000534591 GRIN2AQ12879 1464 aa27.35■■□□□ 1.97
VPS51-216ENST00000534591 PRXQ9BXM0 1461 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms