RNA–Protein interactions for RNA: ENST00000534478.5

RCOR3-216, Transcript of REST corepressor 3, humanhuman

TSL 4

Gene RCOR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-216ENST00000534478 NISCHQ9Y2I1 1504 aa42.4■■■■■ 4.38
RCOR3-216ENST00000534478 CCDC180Q9P1Z9 1646 aa38.13■■■■□ 3.69
RCOR3-216ENST00000534478 ABCC9O60706 1549 aa37.91■■■■□ 3.66
RCOR3-216ENST00000534478 RB1CC1Q8TDY2 1594 aa36.16■■■■□ 3.38
RCOR3-216ENST00000534478 NACADO15069 1562 aa35.93■■■■□ 3.34
RCOR3-216ENST00000534478 UNC13AQ9UPW8 1703 aa35.54■■■■□ 3.28
RCOR3-216ENST00000534478 DCAF8L2P0C7V8 631 aa35.5■■■■□ 3.27
RCOR3-216ENST00000534478 MYO15BQ96JP2 1530 aa35.47■■■■□ 3.27
RCOR3-216ENST00000534478 DNAJC5BQ9UF47 199 aa35.46■■■■□ 3.27
RCOR3-216ENST00000534478 PABPN1Q86U42 306 aaKnown RBP eCLIP35.21■■■■□ 3.23
RCOR3-216ENST00000534478 ZCCHC6Q5VYS8 1495 aaKnown RBP35.19■■■■□ 3.22
RCOR3-216ENST00000534478 BICRAQ9NZM4 1560 aa35.18■■■■□ 3.22
RCOR3-216ENST00000534478 DCAF1Q9Y4B6 1507 aa35.06■■■■□ 3.2
RCOR3-216ENST00000534478 SCRIBQ14160 1630 aa34.69■■■■□ 3.14
RCOR3-216ENST00000534478 SHROOM4Q9ULL8 1493 aa34.66■■■■□ 3.14
RCOR3-216ENST00000534478 CC2D2AQ9P2K1 1620 aa34.33■■■■□ 3.09
RCOR3-216ENST00000534478 EIF4G1Q04637 1599 aaKnown RBP34.27■■■■□ 3.08
RCOR3-216ENST00000534478 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
RCOR3-216ENST00000534478 NCAPD3P42695 1498 aa33.12■■■□□ 2.89
RCOR3-216ENST00000534478 SMARCA4P51532 1647 aa33.12■■■□□ 2.89
RCOR3-216ENST00000534478 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
RCOR3-216ENST00000534478 SMARCA2P51531 1590 aa32.98■■■□□ 2.87
RCOR3-216ENST00000534478 HMGXB3Q12766 1538 aa32.97■■■□□ 2.87
RCOR3-216ENST00000534478 BAZ1AQ9NRL2 1556 aaPredicted RBP32.91■■■□□ 2.86
RCOR3-216ENST00000534478 PEG3Q9GZU2 1588 aa32.81■■■□□ 2.84
RCOR3-216ENST00000534478 BAZ1BQ9UIG0 1483 aaKnown RBP32.73■■■□□ 2.83
RCOR3-216ENST00000534478 ERCC6Q03468 1493 aa32.69■■■□□ 2.82
RCOR3-216ENST00000534478 CUX2O14529 1486 aa32.67■■■□□ 2.82
RCOR3-216ENST00000534478 MROH2BQ7Z745 1585 aa32.67■■■□□ 2.82
RCOR3-216ENST00000534478 NESP48681 1621 aa32.62■■■□□ 2.81
RCOR3-216ENST00000534478 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
RCOR3-216ENST00000534478 LAMC3Q9Y6N6 1575 aa32.43■■■□□ 2.78
RCOR3-216ENST00000534478 THOC2Q8NI27 1593 aaKnown RBP32.38■■■□□ 2.77
RCOR3-216ENST00000534478 WIZO95785 1651 aa32.34■■■□□ 2.77
RCOR3-216ENST00000534478 KIF21AQ7Z4S6 1674 aa32.32■■■□□ 2.76
RCOR3-216ENST00000534478 PDS5BQ9NTI5 1447 aa32.13■■■□□ 2.73
RCOR3-216ENST00000534478 CADPSQ9ULU8 1353 aa32.08■■■□□ 2.73
RCOR3-216ENST00000534478 RSF1Q96T23 1441 aaPredicted RBP31.97■■■□□ 2.71
RCOR3-216ENST00000534478 MRC2Q9UBG0 1479 aa31.92■■■□□ 2.7
RCOR3-216ENST00000534478 TOP2AP11388 1531 aaKnown RBP31.91■■■□□ 2.7
RCOR3-216ENST00000534478 WDR62O43379 1518 aa31.9■■■□□ 2.7
RCOR3-216ENST00000534478 CEP164Q9UPV0 1460 aa31.8■■■□□ 2.68
RCOR3-216ENST00000534478 CFTRP13569 1480 aa31.78■■■□□ 2.68
RCOR3-216ENST00000534478 FANCD2Q9BXW9 1451 aa31.77■■■□□ 2.68
RCOR3-216ENST00000534478 PRDM2Q13029 1718 aa31.69■■■□□ 2.66
RCOR3-216ENST00000534478 URB2Q14146 1524 aaKnown RBP31.54■■■□□ 2.64
RCOR3-216ENST00000534478 CCDC88BA6NC98 1476 aa31.49■■■□□ 2.63
RCOR3-216ENST00000534478 TOPBP1Q92547 1522 aa31.2■■■□□ 2.59
RCOR3-216ENST00000534478 IFT140Q96RY7 1462 aa31.15■■■□□ 2.58
RCOR3-216ENST00000534478 ZNF608Q9ULD9 1512 aaPredicted RBP31.13■■■□□ 2.57
RCOR3-216ENST00000534478 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
RCOR3-216ENST00000534478 ABCC8Q09428 1581 aa31.08■■■□□ 2.57
RCOR3-216ENST00000534478 EIF4G3O43432 1585 aaKnown RBP31.04■■■□□ 2.56
RCOR3-216ENST00000534478 OSCARQ8IYS5 282 aa31.03■■■□□ 2.56
RCOR3-216ENST00000534478 TRIM41Q8WV44 630 aa31.03■■■□□ 2.56
RCOR3-216ENST00000534478 TARBP1Q13395 1621 aaKnown RBP30.98■■■□□ 2.55
RCOR3-216ENST00000534478 POLA1P09884 1462 aaPredicted RBP30.89■■■□□ 2.53
RCOR3-216ENST00000534478 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
RCOR3-216ENST00000534478 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
RCOR3-216ENST00000534478 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
RCOR3-216ENST00000534478 CHD1O14646 1710 aa30.84■■■□□ 2.53
RCOR3-216ENST00000534478 AQRO60306 1485 aaKnown RBP eCLIP30.8■■■□□ 2.528e-7■■■□□ 18
RCOR3-216ENST00000534478 RAD54L2Q9Y4B4 1467 aa30.74■■■□□ 2.51
RCOR3-216ENST00000534478 ARHGEF11O15085 1522 aa30.71■■■□□ 2.51
RCOR3-216ENST00000534478 CUX1P39880 1505 aa30.71■■■□□ 2.51
RCOR3-216ENST00000534478 FGD5Q6ZNL6 1462 aa30.7■■■□□ 2.5
RCOR3-216ENST00000534478 WDR97A6NE52 1622 aa30.66■■■□□ 2.5
RCOR3-216ENST00000534478 SOGA1O94964 1423 aa30.65■■■□□ 2.5
RCOR3-216ENST00000534478 TDRD9Q8NDG6 1382 aaKnown RBP30.58■■■□□ 2.49
RCOR3-216ENST00000534478 SNAPC4Q5SXM2 1469 aa30.53■■■□□ 2.48
RCOR3-216ENST00000534478 PBRM1Q86U86 1689 aa30.48■■■□□ 2.47
RCOR3-216ENST00000534478 SUPT5HO00267 1087 aaKnown RBP30.46■■■□□ 2.47
RCOR3-216ENST00000534478 MAGI1Q96QZ7 1491 aaPredicted RBP30.45■■■□□ 2.47
RCOR3-216ENST00000534478 FBLN2P98095 1184 aa30.45■■■□□ 2.47
RCOR3-216ENST00000534478 CLASP1Q7Z460 1538 aa30.43■■■□□ 2.46
RCOR3-216ENST00000534478 GRIN2BQ13224 1484 aa30.43■■■□□ 2.46
RCOR3-216ENST00000534478 ARAP1Q96P48 1450 aa30.42■■■□□ 2.46
RCOR3-216ENST00000534478 ABCA5Q8WWZ7 1642 aa30.4■■■□□ 2.46
RCOR3-216ENST00000534478 ABCA10Q8WWZ4 1543 aa30.36■■■□□ 2.45
RCOR3-216ENST00000534478 SYNJ1O43426 1573 aa30.36■■■□□ 2.45
RCOR3-216ENST00000534478 SYNJ2O15056 1496 aa30.34■■■□□ 2.45
RCOR3-216ENST00000534478 GAPVD1Q14C86 1478 aa30.33■■■□□ 2.45
RCOR3-216ENST00000534478 CYB5RLQ6IPT4 315 aa30.31■■■□□ 2.44
RCOR3-216ENST00000534478 BIVM-ERCC5R4GMW8 1640 aa30.31■■■□□ 2.44
RCOR3-216ENST00000534478 CHMP7Q8WUX9 453 aaPredicted RBP30.26■■■□□ 2.43
RCOR3-216ENST00000534478 TOP2BQ02880 1626 aa30.25■■■□□ 2.43
RCOR3-216ENST00000534478 WRNQ14191 1432 aaPredicted RBP eCLIP30.17■■■□□ 2.42
RCOR3-216ENST00000534478 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
RCOR3-216ENST00000534478 GRIN2AQ12879 1464 aa30.07■■■□□ 2.4
RCOR3-216ENST00000534478 CEP170Q5SW79 1584 aa30.02■■■□□ 2.4
RCOR3-216ENST00000534478 ERICH3Q5RHP9 1530 aa29.99■■■□□ 2.39
RCOR3-216ENST00000534478 NUP160Q12769 1436 aa29.97■■■□□ 2.39
RCOR3-216ENST00000534478 ERCC6L2Q5T890 1561 aa29.95■■■□□ 2.39
RCOR3-216ENST00000534478 FHAD1B1AJZ9 1412 aa29.94■■■□□ 2.38
RCOR3-216ENST00000534478 SHROOM2Q13796 1616 aa29.92■■■□□ 2.38
RCOR3-216ENST00000534478 TRHP20396 242 aaPredicted RBP29.91■■■□□ 2.38
RCOR3-216ENST00000534478 RUSC2Q8N2Y8 1516 aa29.73■■■□□ 2.35
RCOR3-216ENST00000534478 CUL7Q14999 1698 aa29.61■■■□□ 2.33
RCOR3-216ENST00000534478 PRG4Q92954 1404 aaPredicted RBP29.61■■■□□ 2.33
RCOR3-216ENST00000534478 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms