RNA–Protein interactions for RNA: ENST00000534105.5

SLC43A1-210, Transcript of solute carrier family 43 member 1, humanhuman

TSL 5

Gene SLC43A1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-210ENST00000534105 NISCHQ9Y2I1 1504 aa42.93■■■■■ 4.46
SLC43A1-210ENST00000534105 CCDC180Q9P1Z9 1646 aa38.23■■■■□ 3.71
SLC43A1-210ENST00000534105 ABCC9O60706 1549 aa37.36■■■■□ 3.57
SLC43A1-210ENST00000534105 RB1CC1Q8TDY2 1594 aa36■■■■□ 3.35
SLC43A1-210ENST00000534105 NACADO15069 1562 aa35.98■■■■□ 3.35
SLC43A1-210ENST00000534105 DCAF8L2P0C7V8 631 aa35.8■■■■□ 3.32
SLC43A1-210ENST00000534105 MYO15BQ96JP2 1530 aa35.79■■■■□ 3.32
SLC43A1-210ENST00000534105 ZCCHC6Q5VYS8 1495 aaKnown RBP35.74■■■■□ 3.31
SLC43A1-210ENST00000534105 DCAF1Q9Y4B6 1507 aa35.59■■■■□ 3.29
SLC43A1-210ENST00000534105 UNC13AQ9UPW8 1703 aa35.13■■■■□ 3.21
SLC43A1-210ENST00000534105 PABPN1Q86U42 306 aaKnown RBP eCLIP34.88■■■■□ 3.17
SLC43A1-210ENST00000534105 BICRAQ9NZM4 1560 aa34.87■■■■□ 3.17
SLC43A1-210ENST00000534105 SCRIBQ14160 1630 aa34.76■■■■□ 3.15
SLC43A1-210ENST00000534105 SHROOM4Q9ULL8 1493 aa34.63■■■■□ 3.13
SLC43A1-210ENST00000534105 DNAJC5BQ9UF47 199 aa34.34■■■■□ 3.09
SLC43A1-210ENST00000534105 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
SLC43A1-210ENST00000534105 CC2D2AQ9P2K1 1620 aa33.83■■■■□ 3.01
SLC43A1-210ENST00000534105 CECR2Q9BXF3 1484 aa33.63■■■□□ 2.97
SLC43A1-210ENST00000534105 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
SLC43A1-210ENST00000534105 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
SLC43A1-210ENST00000534105 NCAPD3P42695 1498 aa33.19■■■□□ 2.9
SLC43A1-210ENST00000534105 ATAD2BQ9ULI0 1458 aa33.16■■■□□ 2.9
SLC43A1-210ENST00000534105 SMARCA2P51531 1590 aa33.15■■■□□ 2.9
SLC43A1-210ENST00000534105 PEG3Q9GZU2 1588 aa33.04■■■□□ 2.88
SLC43A1-210ENST00000534105 MROH2BQ7Z745 1585 aa33.04■■■□□ 2.88
SLC43A1-210ENST00000534105 HMGXB3Q12766 1538 aa33.02■■■□□ 2.88
SLC43A1-210ENST00000534105 BAZ1BQ9UIG0 1483 aaKnown RBP32.87■■■□□ 2.85
SLC43A1-210ENST00000534105 WIZO95785 1651 aa32.66■■■□□ 2.82
SLC43A1-210ENST00000534105 RSF1Q96T23 1441 aaPredicted RBP32.66■■■□□ 2.82
SLC43A1-210ENST00000534105 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
SLC43A1-210ENST00000534105 LAMC3Q9Y6N6 1575 aa32.32■■■□□ 2.76
SLC43A1-210ENST00000534105 NESP48681 1621 aa32.3■■■□□ 2.76
SLC43A1-210ENST00000534105 ERCC6Q03468 1493 aa32.24■■■□□ 2.75
SLC43A1-210ENST00000534105 CADPSQ9ULU8 1353 aa32.2■■■□□ 2.75
SLC43A1-210ENST00000534105 PDS5BQ9NTI5 1447 aa32.11■■■□□ 2.73
SLC43A1-210ENST00000534105 CFTRP13569 1480 aa32■■■□□ 2.71
SLC43A1-210ENST00000534105 CUX2O14529 1486 aa31.99■■■□□ 2.71
SLC43A1-210ENST00000534105 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
SLC43A1-210ENST00000534105 KIF21AQ7Z4S6 1674 aa31.94■■■□□ 2.7
SLC43A1-210ENST00000534105 THOC2Q8NI27 1593 aaKnown RBP31.88■■■□□ 2.69
SLC43A1-210ENST00000534105 FANCD2Q9BXW9 1451 aa31.79■■■□□ 2.68
SLC43A1-210ENST00000534105 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
SLC43A1-210ENST00000534105 PRDM2Q13029 1718 aa31.75■■■□□ 2.67
SLC43A1-210ENST00000534105 MRC2Q9UBG0 1479 aa31.74■■■□□ 2.67
SLC43A1-210ENST00000534105 SUPT5HO00267 1087 aaKnown RBP31.7■■■□□ 2.67
SLC43A1-210ENST00000534105 WDR62O43379 1518 aa31.65■■■□□ 2.66
SLC43A1-210ENST00000534105 URB2Q14146 1524 aaKnown RBP31.46■■■□□ 2.63
SLC43A1-210ENST00000534105 ABCC8Q09428 1581 aa31.36■■■□□ 2.61
SLC43A1-210ENST00000534105 TOPBP1Q92547 1522 aa31.29■■■□□ 2.6
SLC43A1-210ENST00000534105 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.59
SLC43A1-210ENST00000534105 IFT140Q96RY7 1462 aa31.13■■■□□ 2.57
SLC43A1-210ENST00000534105 DNAJC5Q9H3Z4 198 aa31.08■■■□□ 2.57
SLC43A1-210ENST00000534105 POLA1P09884 1462 aaPredicted RBP31.01■■■□□ 2.55
SLC43A1-210ENST00000534105 CUX1P39880 1505 aa31■■■□□ 2.55
SLC43A1-210ENST00000534105 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.55
SLC43A1-210ENST00000534105 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
SLC43A1-210ENST00000534105 FGD5Q6ZNL6 1462 aa30.91■■■□□ 2.54
SLC43A1-210ENST00000534105 SOGA1O94964 1423 aa30.89■■■□□ 2.53
SLC43A1-210ENST00000534105 RAD54L2Q9Y4B4 1467 aa30.83■■■□□ 2.53
SLC43A1-210ENST00000534105 EIF4G3O43432 1585 aaKnown RBP30.82■■■□□ 2.52
SLC43A1-210ENST00000534105 WRNQ14191 1432 aaPredicted RBP eCLIP30.81■■■□□ 2.52
SLC43A1-210ENST00000534105 WDR97A6NE52 1622 aa30.79■■■□□ 2.52
SLC43A1-210ENST00000534105 TOP2BQ02880 1626 aa30.76■■■□□ 2.51
SLC43A1-210ENST00000534105 BIVM-ERCC5R4GMW8 1640 aa30.75■■■□□ 2.51
SLC43A1-210ENST00000534105 AQRO60306 1485 aaKnown RBP eCLIP30.75■■■□□ 2.511e-8■■■■■ 28.3
SLC43A1-210ENST00000534105 TDRD9Q8NDG6 1382 aaKnown RBP30.68■■■□□ 2.5
SLC43A1-210ENST00000534105 SYNJ1O43426 1573 aa30.68■■■□□ 2.5
SLC43A1-210ENST00000534105 ABCA10Q8WWZ4 1543 aa30.65■■■□□ 2.5
SLC43A1-210ENST00000534105 OSCARQ8IYS5 282 aa30.64■■■□□ 2.5
SLC43A1-210ENST00000534105 GRIN2BQ13224 1484 aa30.56■■■□□ 2.48
SLC43A1-210ENST00000534105 GAPVD1Q14C86 1478 aa30.54■■■□□ 2.48
SLC43A1-210ENST00000534105 ABCA5Q8WWZ7 1642 aa30.51■■■□□ 2.48
SLC43A1-210ENST00000534105 MAGI1Q96QZ7 1491 aaPredicted RBP30.5■■■□□ 2.47
SLC43A1-210ENST00000534105 SNAPC4Q5SXM2 1469 aa30.47■■■□□ 2.47
SLC43A1-210ENST00000534105 PBRM1Q86U86 1689 aa30.45■■■□□ 2.46
SLC43A1-210ENST00000534105 CHD1O14646 1710 aa30.44■■■□□ 2.46
SLC43A1-210ENST00000534105 FBLN2P98095 1184 aa30.38■■■□□ 2.45
SLC43A1-210ENST00000534105 SYNJ2O15056 1496 aa30.37■■■□□ 2.45
SLC43A1-210ENST00000534105 CHMP7Q8WUX9 453 aaPredicted RBP30.34■■■□□ 2.45
SLC43A1-210ENST00000534105 ERICH3Q5RHP9 1530 aa30.3■■■□□ 2.44
SLC43A1-210ENST00000534105 ADAMTS12P58397 1594 aa30.22■■■□□ 2.43
SLC43A1-210ENST00000534105 FHAD1B1AJZ9 1412 aa30.2■■■□□ 2.42
SLC43A1-210ENST00000534105 KIF27Q86VH2 1401 aa30.19■■■□□ 2.42
SLC43A1-210ENST00000534105 GRIN2AQ12879 1464 aa30.14■■■□□ 2.42
SLC43A1-210ENST00000534105 CLASP1Q7Z460 1538 aa30.14■■■□□ 2.42
SLC43A1-210ENST00000534105 ARHGEF11O15085 1522 aa30.11■■■□□ 2.41
SLC43A1-210ENST00000534105 RIMBP3CA6NJZ7 1639 aa30.1■■■□□ 2.41
SLC43A1-210ENST00000534105 RIMBP3BA6NNM3 1639 aa30.1■■■□□ 2.41
SLC43A1-210ENST00000534105 RIMBP3Q9UFD9 1639 aa30.1■■■□□ 2.41
SLC43A1-210ENST00000534105 IGF1RP08069 1367 aa30.06■■■□□ 2.4
SLC43A1-210ENST00000534105 NUP160Q12769 1436 aa30.04■■■□□ 2.4
SLC43A1-210ENST00000534105 TRIM41Q8WV44 630 aa30.02■■■□□ 2.4
SLC43A1-210ENST00000534105 CUL7Q14999 1698 aa30■■■□□ 2.39
SLC43A1-210ENST00000534105 CEP170Q5SW79 1584 aa29.96■■■□□ 2.39
SLC43A1-210ENST00000534105 CARMIL1Q5VZK9 1371 aa29.88■■■□□ 2.37
SLC43A1-210ENST00000534105 ARAP1Q96P48 1450 aa29.85■■■□□ 2.37
SLC43A1-210ENST00000534105 SHROOM2Q13796 1616 aa29.82■■■□□ 2.36
SLC43A1-210ENST00000534105 CYB5RLQ6IPT4 315 aa29.81■■■□□ 2.36
SLC43A1-210ENST00000534105 RUSC2Q8N2Y8 1516 aa29.8■■■□□ 2.36
SLC43A1-210ENST00000534105 KIAA0586Q9BVV6 1533 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms