RNA–Protein interactions for RNA: ENST00000534047.5

AMPD3-218, Transcript of adenosine monophosphate deaminase 3, humanhuman

TSL 1 (best)

Gene AMPD3, Length 2,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPD3-218ENST00000534047 NISCHQ9Y2I1 1504 aa31.13■■■□□ 2.57
AMPD3-218ENST00000534047 CCDC180Q9P1Z9 1646 aa27.16■■□□□ 1.94
AMPD3-218ENST00000534047 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
AMPD3-218ENST00000534047 ABCC9O60706 1549 aa26.05■■□□□ 1.76
AMPD3-218ENST00000534047 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
AMPD3-218ENST00000534047 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
AMPD3-218ENST00000534047 MYO15BQ96JP2 1530 aa25.45■■□□□ 1.67
AMPD3-218ENST00000534047 NACADO15069 1562 aa25.39■■□□□ 1.65
AMPD3-218ENST00000534047 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
AMPD3-218ENST00000534047 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
AMPD3-218ENST00000534047 SCRIBQ14160 1630 aa25.05■■□□□ 1.6
AMPD3-218ENST00000534047 UNC13AQ9UPW8 1703 aa24.74■■□□□ 1.55
AMPD3-218ENST00000534047 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
AMPD3-218ENST00000534047 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
AMPD3-218ENST00000534047 CECR2Q9BXF3 1484 aa24.29■■□□□ 1.48
AMPD3-218ENST00000534047 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
AMPD3-218ENST00000534047 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
AMPD3-218ENST00000534047 MROH2BQ7Z745 1585 aa24.08■■□□□ 1.45
AMPD3-218ENST00000534047 BAZ1AQ9NRL2 1556 aaPredicted RBP24.01■■□□□ 1.43
AMPD3-218ENST00000534047 SMARCA4P51532 1647 aa23.96■■□□□ 1.43
AMPD3-218ENST00000534047 WIZO95785 1651 aa23.85■■□□□ 1.41
AMPD3-218ENST00000534047 EIF4G1Q04637 1599 aaKnown RBP23.81■■□□□ 1.4
AMPD3-218ENST00000534047 ATAD2BQ9ULI0 1458 aa23.67■■□□□ 1.38
AMPD3-218ENST00000534047 PEG3Q9GZU2 1588 aa23.66■■□□□ 1.38
AMPD3-218ENST00000534047 SMARCA2P51531 1590 aa23.58■■□□□ 1.36
AMPD3-218ENST00000534047 TOP2AP11388 1531 aaKnown RBP23.55■■□□□ 1.36
AMPD3-218ENST00000534047 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
AMPD3-218ENST00000534047 NCAPD3P42695 1498 aa23.49■■□□□ 1.35
AMPD3-218ENST00000534047 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
AMPD3-218ENST00000534047 HMGXB3Q12766 1538 aa23.39■■□□□ 1.33
AMPD3-218ENST00000534047 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
AMPD3-218ENST00000534047 DNAJC5BQ9UF47 199 aa23.31■■□□□ 1.32
AMPD3-218ENST00000534047 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
AMPD3-218ENST00000534047 CFTRP13569 1480 aa22.91■■□□□ 1.26
AMPD3-218ENST00000534047 CADPSQ9ULU8 1353 aa22.88■■□□□ 1.25
AMPD3-218ENST00000534047 NESP48681 1621 aa22.82■■□□□ 1.24
AMPD3-218ENST00000534047 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
AMPD3-218ENST00000534047 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
AMPD3-218ENST00000534047 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
AMPD3-218ENST00000534047 PRDM2Q13029 1718 aa22.65■■□□□ 1.22
AMPD3-218ENST00000534047 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
AMPD3-218ENST00000534047 FANCD2Q9BXW9 1451 aa22.62■■□□□ 1.21
AMPD3-218ENST00000534047 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
AMPD3-218ENST00000534047 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
AMPD3-218ENST00000534047 CUX1P39880 1505 aa22.52■■□□□ 1.2
AMPD3-218ENST00000534047 CEP164Q9UPV0 1460 aa22.47■■□□□ 1.19
AMPD3-218ENST00000534047 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
AMPD3-218ENST00000534047 KIF21AQ7Z4S6 1674 aa22.45■■□□□ 1.19
AMPD3-218ENST00000534047 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
AMPD3-218ENST00000534047 FAM9AQ8IZU1 332 aaPredicted RBP22.39■■□□□ 1.17
AMPD3-218ENST00000534047 URB2Q14146 1524 aaKnown RBP22.38■■□□□ 1.17
AMPD3-218ENST00000534047 SOGA1O94964 1423 aa22.35■■□□□ 1.17
AMPD3-218ENST00000534047 TOPBP1Q92547 1522 aa22.35■■□□□ 1.17
AMPD3-218ENST00000534047 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
AMPD3-218ENST00000534047 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
AMPD3-218ENST00000534047 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
AMPD3-218ENST00000534047 ERCC6Q03468 1493 aa22.3■■□□□ 1.16
AMPD3-218ENST00000534047 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.16
AMPD3-218ENST00000534047 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
AMPD3-218ENST00000534047 LOC105371045A0A1W2PR82 267 aa22.21■■□□□ 1.15
AMPD3-218ENST00000534047 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
AMPD3-218ENST00000534047 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
AMPD3-218ENST00000534047 WDR62O43379 1518 aa22.16■■□□□ 1.14
AMPD3-218ENST00000534047 EEA1Q15075 1411 aa22.12■■□□□ 1.13
AMPD3-218ENST00000534047 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
AMPD3-218ENST00000534047 EHMT2Q96KQ7 1210 aa22.12■■□□□ 1.13
AMPD3-218ENST00000534047 CUX2O14529 1486 aa22.11■■□□□ 1.13
AMPD3-218ENST00000534047 KIF27Q86VH2 1401 aa22.08■■□□□ 1.12
AMPD3-218ENST00000534047 ABCA10Q8WWZ4 1543 aa22.07■■□□□ 1.12
AMPD3-218ENST00000534047 TARBP1Q13395 1621 aaKnown RBP22.03■■□□□ 1.12
AMPD3-218ENST00000534047 TDRD9Q8NDG6 1382 aaKnown RBP22.01■■□□□ 1.11
AMPD3-218ENST00000534047 WDR97A6NE52 1622 aa22■■□□□ 1.11
AMPD3-218ENST00000534047 IGF1RP08069 1367 aa21.97■■□□□ 1.11
AMPD3-218ENST00000534047 IFT140Q96RY7 1462 aa21.95■■□□□ 1.1
AMPD3-218ENST00000534047 ZNF608Q9ULD9 1512 aaPredicted RBP21.93■■□□□ 1.1
AMPD3-218ENST00000534047 AQRO60306 1485 aaKnown RBP eCLIP21.91■■□□□ 1.11e-6■■■■■ 35.6
AMPD3-218ENST00000534047 ABCA5Q8WWZ7 1642 aa21.9■■□□□ 1.1
AMPD3-218ENST00000534047 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
AMPD3-218ENST00000534047 GAPVD1Q14C86 1478 aa21.89■■□□□ 1.1
AMPD3-218ENST00000534047 RAPGEF2Q9Y4G8 1499 aa21.88■■□□□ 1.09
AMPD3-218ENST00000534047 KIF21BO75037 1637 aa21.87■■□□□ 1.09
AMPD3-218ENST00000534047 GOLGA3Q08378 1498 aa21.85■■□□□ 1.09
AMPD3-218ENST00000534047 CARMIL1Q5VZK9 1371 aa21.83■■□□□ 1.08
AMPD3-218ENST00000534047 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
AMPD3-218ENST00000534047 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
AMPD3-218ENST00000534047 EIF4G3O43432 1585 aaKnown RBP21.77■■□□□ 1.08
AMPD3-218ENST00000534047 TNIKQ9UKE5 1360 aa21.75■■□□□ 1.07
AMPD3-218ENST00000534047 GRIN2BQ13224 1484 aa21.75■■□□□ 1.07
AMPD3-218ENST00000534047 PBRM1Q86U86 1689 aa21.73■■□□□ 1.07
AMPD3-218ENST00000534047 CUL7Q14999 1698 aa21.7■■□□□ 1.06
AMPD3-218ENST00000534047 SNAPC4Q5SXM2 1469 aa21.66■■□□□ 1.06
AMPD3-218ENST00000534047 FHAD1B1AJZ9 1412 aa21.64■■□□□ 1.05
AMPD3-218ENST00000534047 CEP162Q5TB80 1403 aa21.64■■□□□ 1.05
AMPD3-218ENST00000534047 ADAMTS12P58397 1594 aa21.64■■□□□ 1.05
AMPD3-218ENST00000534047 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
AMPD3-218ENST00000534047 MAGI1Q96QZ7 1491 aaPredicted RBP21.57■■□□□ 1.04
AMPD3-218ENST00000534047 CLIP1P30622 1438 aa21.52■■□□□ 1.04
AMPD3-218ENST00000534047 SYNJ2O15056 1496 aa21.51■■□□□ 1.03
AMPD3-218ENST00000534047 FBLN2P98095 1184 aa21.51■■□□□ 1.03
AMPD3-218ENST00000534047 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms