RNA–Protein interactions for RNA: ENST00000533919.5

NDUFV1-226, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, humanhuman

TSL 3

Gene NDUFV1, Length 774 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV1-226ENST00000533919 NISCHQ9Y2I1 1504 aa36.98■■■■□ 3.51
NDUFV1-226ENST00000533919 ABCC9O60706 1549 aa33.7■■■□□ 2.99
NDUFV1-226ENST00000533919 CCDC180Q9P1Z9 1646 aa33.5■■■□□ 2.95
NDUFV1-226ENST00000533919 RB1CC1Q8TDY2 1594 aa32.02■■■□□ 2.72
NDUFV1-226ENST00000533919 DNAJC5BQ9UF47 199 aa31.94■■■□□ 2.7
NDUFV1-226ENST00000533919 NACADO15069 1562 aa31.7■■■□□ 2.67
NDUFV1-226ENST00000533919 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
NDUFV1-226ENST00000533919 PABPN1Q86U42 306 aaKnown RBP eCLIP31.23■■■□□ 2.595e-7■■■□□ 18.9
NDUFV1-226ENST00000533919 DCAF8L2P0C7V8 631 aa31.17■■■□□ 2.58
NDUFV1-226ENST00000533919 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
NDUFV1-226ENST00000533919 BICRAQ9NZM4 1560 aa31.09■■■□□ 2.57
NDUFV1-226ENST00000533919 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
NDUFV1-226ENST00000533919 DCAF1Q9Y4B6 1507 aa30.6■■■□□ 2.49
NDUFV1-226ENST00000533919 ZCCHC6Q5VYS8 1495 aaKnown RBP30.57■■■□□ 2.48
NDUFV1-226ENST00000533919 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.48
NDUFV1-226ENST00000533919 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
NDUFV1-226ENST00000533919 SCRIBQ14160 1630 aa30.36■■■□□ 2.45
NDUFV1-226ENST00000533919 EIF4G1Q04637 1599 aaKnown RBP30.35■■■□□ 2.45
NDUFV1-226ENST00000533919 DNAJC5Q9H3Z4 198 aa29.7■■■□□ 2.35
NDUFV1-226ENST00000533919 CUX2O14529 1486 aa29.32■■■□□ 2.28
NDUFV1-226ENST00000533919 NCAPD3P42695 1498 aa29.23■■■□□ 2.27
NDUFV1-226ENST00000533919 ERCC6Q03468 1493 aa29.15■■■□□ 2.26
NDUFV1-226ENST00000533919 ATAD2BQ9ULI0 1458 aa29.05■■■□□ 2.24
NDUFV1-226ENST00000533919 HMGXB3Q12766 1538 aa29.03■■■□□ 2.24
NDUFV1-226ENST00000533919 SMARCA2P51531 1590 aa29.01■■■□□ 2.23
NDUFV1-226ENST00000533919 SMARCA4P51532 1647 aa28.97■■■□□ 2.23
NDUFV1-226ENST00000533919 NESP48681 1621 aa28.84■■■□□ 2.21
NDUFV1-226ENST00000533919 BAZ1AQ9NRL2 1556 aaPredicted RBP28.76■■■□□ 2.19
NDUFV1-226ENST00000533919 BAZ1BQ9UIG0 1483 aaKnown RBP28.75■■■□□ 2.19
NDUFV1-226ENST00000533919 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
NDUFV1-226ENST00000533919 PEG3Q9GZU2 1588 aa28.74■■■□□ 2.19
NDUFV1-226ENST00000533919 LAMC3Q9Y6N6 1575 aa28.68■■■□□ 2.18
NDUFV1-226ENST00000533919 KIF21AQ7Z4S6 1674 aa28.57■■■□□ 2.16
NDUFV1-226ENST00000533919 PDS5BQ9NTI5 1447 aa28.46■■■□□ 2.15
NDUFV1-226ENST00000533919 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.15
NDUFV1-226ENST00000533919 CADPSQ9ULU8 1353 aa28.27■■■□□ 2.12
NDUFV1-226ENST00000533919 MRC2Q9UBG0 1479 aa28.26■■■□□ 2.11
NDUFV1-226ENST00000533919 WDR62O43379 1518 aa28.25■■■□□ 2.11
NDUFV1-226ENST00000533919 WIZO95785 1651 aa28.13■■■□□ 2.09
NDUFV1-226ENST00000533919 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
NDUFV1-226ENST00000533919 CEP164Q9UPV0 1460 aa28.05■■■□□ 2.08
NDUFV1-226ENST00000533919 FANCD2Q9BXW9 1451 aa27.96■■■□□ 2.07
NDUFV1-226ENST00000533919 CFTRP13569 1480 aa27.9■■■□□ 2.06
NDUFV1-226ENST00000533919 OSCARQ8IYS5 282 aa27.8■■■□□ 2.04
NDUFV1-226ENST00000533919 URB2Q14146 1524 aaKnown RBP27.77■■■□□ 2.04
NDUFV1-226ENST00000533919 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
NDUFV1-226ENST00000533919 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
NDUFV1-226ENST00000533919 RSF1Q96T23 1441 aaPredicted RBP27.69■■■□□ 2.02
NDUFV1-226ENST00000533919 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
NDUFV1-226ENST00000533919 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
NDUFV1-226ENST00000533919 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
NDUFV1-226ENST00000533919 IFT140Q96RY7 1462 aa27.51■■■□□ 2
NDUFV1-226ENST00000533919 ZNF608Q9ULD9 1512 aaPredicted RBP27.47■■□□□ 1.99
NDUFV1-226ENST00000533919 ARHGEF11O15085 1522 aa27.44■■□□□ 1.98
NDUFV1-226ENST00000533919 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
NDUFV1-226ENST00000533919 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
NDUFV1-226ENST00000533919 EIF4G3O43432 1585 aaKnown RBP27.38■■□□□ 1.97
NDUFV1-226ENST00000533919 ABCC8Q09428 1581 aa27.36■■□□□ 1.97
NDUFV1-226ENST00000533919 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
NDUFV1-226ENST00000533919 CHD1O14646 1710 aa27.29■■□□□ 1.96
NDUFV1-226ENST00000533919 TARBP1Q13395 1621 aaKnown RBP27.25■■□□□ 1.95
NDUFV1-226ENST00000533919 AQRO60306 1485 aaKnown RBP eCLIP27.14■■□□□ 1.944e-7■■■■■ 31.1
NDUFV1-226ENST00000533919 CYB5RLQ6IPT4 315 aa27.13■■□□□ 1.93
NDUFV1-226ENST00000533919 ARAP1Q96P48 1450 aa27.12■■□□□ 1.93
NDUFV1-226ENST00000533919 POLA1P09884 1462 aaPredicted RBP27.09■■□□□ 1.93
NDUFV1-226ENST00000533919 WDR97A6NE52 1622 aa27.01■■□□□ 1.92
NDUFV1-226ENST00000533919 FBLN2P98095 1184 aa26.97■■□□□ 1.91
NDUFV1-226ENST00000533919 RAD54L2Q9Y4B4 1467 aa26.95■■□□□ 1.91
NDUFV1-226ENST00000533919 TRHP20396 242 aaPredicted RBP26.95■■□□□ 1.9
NDUFV1-226ENST00000533919 CLASP1Q7Z460 1538 aa26.94■■□□□ 1.9
NDUFV1-226ENST00000533919 SOGA1O94964 1423 aa26.91■■□□□ 1.9
NDUFV1-226ENST00000533919 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
NDUFV1-226ENST00000533919 TDRD9Q8NDG6 1382 aaKnown RBP26.88■■□□□ 1.89
NDUFV1-226ENST00000533919 SYNJ1O43426 1573 aa26.88■■□□□ 1.89
NDUFV1-226ENST00000533919 FGD5Q6ZNL6 1462 aa26.86■■□□□ 1.89
NDUFV1-226ENST00000533919 MAGI1Q96QZ7 1491 aaPredicted RBP26.86■■□□□ 1.89
NDUFV1-226ENST00000533919 GRIN2BQ13224 1484 aa26.78■■□□□ 1.88
NDUFV1-226ENST00000533919 CUX1P39880 1505 aa26.77■■□□□ 1.88
NDUFV1-226ENST00000533919 SYNJ2O15056 1496 aa26.75■■□□□ 1.87
NDUFV1-226ENST00000533919 CHMP7Q8WUX9 453 aaPredicted RBP26.75■■□□□ 1.87
NDUFV1-226ENST00000533919 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
NDUFV1-226ENST00000533919 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
NDUFV1-226ENST00000533919 ABCA5Q8WWZ7 1642 aa26.61■■□□□ 1.85
NDUFV1-226ENST00000533919 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
NDUFV1-226ENST00000533919 AEBP2Q6ZN18 517 aaPredicted RBP26.49■■□□□ 1.83
NDUFV1-226ENST00000533919 GRIN2AQ12879 1464 aa26.44■■□□□ 1.82
NDUFV1-226ENST00000533919 ERCC6L2Q5T890 1561 aa26.42■■□□□ 1.82
NDUFV1-226ENST00000533919 ADAMTS12P58397 1594 aa26.41■■□□□ 1.82
NDUFV1-226ENST00000533919 CEP170Q5SW79 1584 aa26.39■■□□□ 1.82
NDUFV1-226ENST00000533919 SHROOM2Q13796 1616 aa26.39■■□□□ 1.81
NDUFV1-226ENST00000533919 NUP160Q12769 1436 aa26.39■■□□□ 1.81
NDUFV1-226ENST00000533919 WRNQ14191 1432 aaPredicted RBP eCLIP26.32■■□□□ 1.8
NDUFV1-226ENST00000533919 BIVM-ERCC5R4GMW8 1640 aa26.32■■□□□ 1.8
NDUFV1-226ENST00000533919 KIF13AQ9H1H9 1805 aa26.28■■□□□ 1.8
NDUFV1-226ENST00000533919 TOP2BQ02880 1626 aa26.28■■□□□ 1.8
NDUFV1-226ENST00000533919 FHAD1B1AJZ9 1412 aa26.27■■□□□ 1.8
NDUFV1-226ENST00000533919 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
NDUFV1-226ENST00000533919 PRG4Q92954 1404 aaPredicted RBP26.1■■□□□ 1.77
NDUFV1-226ENST00000533919 RUSC2Q8N2Y8 1516 aa26.07■■□□□ 1.76
NDUFV1-226ENST00000533919 MAPKBP1O60336 1514 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms