RNA–Protein interactions for RNA: ENST00000533860.5

APLP2-222, Transcript of amyloid beta precursor like protein 2, humanhuman

TSL 1 (best)

Gene APLP2, Length 1,424 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLP2-222ENST00000533860 NISCHQ9Y2I1 1504 aa36.42■■■■□ 3.42
APLP2-222ENST00000533860 CCDC180Q9P1Z9 1646 aa31.91■■■□□ 2.7
APLP2-222ENST00000533860 ZCCHC6Q5VYS8 1495 aaKnown RBP30.55■■■□□ 2.48
APLP2-222ENST00000533860 ABCC9O60706 1549 aa30.45■■■□□ 2.47
APLP2-222ENST00000533860 DCAF1Q9Y4B6 1507 aa30.09■■■□□ 2.41
APLP2-222ENST00000533860 DCAF8L2P0C7V8 631 aa30.07■■■□□ 2.4
APLP2-222ENST00000533860 MYO15BQ96JP2 1530 aa29.84■■■□□ 2.37
APLP2-222ENST00000533860 NACADO15069 1562 aa29.75■■■□□ 2.35
APLP2-222ENST00000533860 RB1CC1Q8TDY2 1594 aa29.57■■■□□ 2.32
APLP2-222ENST00000533860 SHROOM4Q9ULL8 1493 aa29.47■■■□□ 2.31
APLP2-222ENST00000533860 SCRIBQ14160 1630 aa29.32■■■□□ 2.28
APLP2-222ENST00000533860 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
APLP2-222ENST00000533860 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
APLP2-222ENST00000533860 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
APLP2-222ENST00000533860 CECR2Q9BXF3 1484 aa28.37■■■□□ 2.13
APLP2-222ENST00000533860 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
APLP2-222ENST00000533860 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
APLP2-222ENST00000533860 RSF1Q96T23 1441 aaPredicted RBP28.13■■■□□ 2.09
APLP2-222ENST00000533860 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
APLP2-222ENST00000533860 SMARCA4P51532 1647 aa28.08■■■□□ 2.09
APLP2-222ENST00000533860 WIZO95785 1651 aa27.92■■■□□ 2.06
APLP2-222ENST00000533860 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.05
APLP2-222ENST00000533860 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
APLP2-222ENST00000533860 ATAD2BQ9ULI0 1458 aa27.69■■■□□ 2.02
APLP2-222ENST00000533860 SMARCA2P51531 1590 aa27.61■■■□□ 2.01
APLP2-222ENST00000533860 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
APLP2-222ENST00000533860 CC2D2AQ9P2K1 1620 aa27.57■■■□□ 2
APLP2-222ENST00000533860 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
APLP2-222ENST00000533860 BAZ1BQ9UIG0 1483 aaKnown RBP27.47■■□□□ 1.99
APLP2-222ENST00000533860 HMGXB3Q12766 1538 aa27.42■■□□□ 1.98
APLP2-222ENST00000533860 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
APLP2-222ENST00000533860 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
APLP2-222ENST00000533860 CHIC1Q5VXU3 224 aa26.83■■□□□ 1.89
APLP2-222ENST00000533860 CFTRP13569 1480 aa26.78■■□□□ 1.88
APLP2-222ENST00000533860 CADPSQ9ULU8 1353 aa26.73■■□□□ 1.87
APLP2-222ENST00000533860 NESP48681 1621 aa26.68■■□□□ 1.86
APLP2-222ENST00000533860 PRDM2Q13029 1718 aa26.67■■□□□ 1.86
APLP2-222ENST00000533860 ABCC8Q09428 1581 aa26.65■■□□□ 1.86
APLP2-222ENST00000533860 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
APLP2-222ENST00000533860 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
APLP2-222ENST00000533860 WRNQ14191 1432 aaPredicted RBP eCLIP26.45■■□□□ 1.82
APLP2-222ENST00000533860 TRIM41Q8WV44 630 aa26.45■■□□□ 1.82
APLP2-222ENST00000533860 SYNJ1O43426 1573 aa26.43■■□□□ 1.82
APLP2-222ENST00000533860 KIF21AQ7Z4S6 1674 aa26.36■■□□□ 1.81
APLP2-222ENST00000533860 CUX1P39880 1505 aa26.35■■□□□ 1.81
APLP2-222ENST00000533860 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
APLP2-222ENST00000533860 BIVM-ERCC5R4GMW8 1640 aa26.32■■□□□ 1.8
APLP2-222ENST00000533860 TOP2BQ02880 1626 aa26.3■■□□□ 1.8
APLP2-222ENST00000533860 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
APLP2-222ENST00000533860 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.78
APLP2-222ENST00000533860 DNMBPQ6XZF7 1577 aa26.18■■□□□ 1.78
APLP2-222ENST00000533860 TOPBP1Q92547 1522 aa26.16■■□□□ 1.78
APLP2-222ENST00000533860 FGD5Q6ZNL6 1462 aa26.09■■□□□ 1.77
APLP2-222ENST00000533860 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
APLP2-222ENST00000533860 SOGA1O94964 1423 aa26.07■■□□□ 1.76
APLP2-222ENST00000533860 ERCC6Q03468 1493 aa26.06■■□□□ 1.76
APLP2-222ENST00000533860 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
APLP2-222ENST00000533860 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
APLP2-222ENST00000533860 FAM9AQ8IZU1 332 aaPredicted RBP26.01■■□□□ 1.75
APLP2-222ENST00000533860 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
APLP2-222ENST00000533860 WDR62O43379 1518 aa25.97■■□□□ 1.75
APLP2-222ENST00000533860 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
APLP2-222ENST00000533860 EEA1Q15075 1411 aa25.86■■□□□ 1.73
APLP2-222ENST00000533860 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
APLP2-222ENST00000533860 CUX2O14529 1486 aa25.84■■□□□ 1.73
APLP2-222ENST00000533860 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.73
APLP2-222ENST00000533860 TARBP1Q13395 1621 aaKnown RBP25.82■■□□□ 1.72
APLP2-222ENST00000533860 LOC105371045A0A1W2PR82 267 aa25.8■■□□□ 1.72
APLP2-222ENST00000533860 KIF27Q86VH2 1401 aa25.78■■□□□ 1.72
APLP2-222ENST00000533860 CSRNP3Q8WYN3 585 aa25.77■■□□□ 1.72
APLP2-222ENST00000533860 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
APLP2-222ENST00000533860 ABCA5Q8WWZ7 1642 aa25.69■■□□□ 1.7
APLP2-222ENST00000533860 TDRD9Q8NDG6 1382 aaKnown RBP25.67■■□□□ 1.7
APLP2-222ENST00000533860 EHMT2Q96KQ7 1210 aa25.66■■□□□ 1.7
APLP2-222ENST00000533860 IGF1RP08069 1367 aa25.64■■□□□ 1.69
APLP2-222ENST00000533860 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
APLP2-222ENST00000533860 KIF21BO75037 1637 aa25.62■■□□□ 1.69
APLP2-222ENST00000533860 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
APLP2-222ENST00000533860 PRXQ9BXM0 1461 aa25.59■■□□□ 1.69
APLP2-222ENST00000533860 AQRO60306 1485 aaKnown RBP eCLIP25.58■■□□□ 1.686e-12■■■■■ 50.2
APLP2-222ENST00000533860 RAPGEF2Q9Y4G8 1499 aa25.54■■□□□ 1.68
APLP2-222ENST00000533860 PBRM1Q86U86 1689 aa25.53■■□□□ 1.68
APLP2-222ENST00000533860 GOLGA3Q08378 1498 aa25.53■■□□□ 1.68
APLP2-222ENST00000533860 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
APLP2-222ENST00000533860 ERICH3Q5RHP9 1530 aa25.5■■□□□ 1.67
APLP2-222ENST00000533860 CARMIL1Q5VZK9 1371 aa25.47■■□□□ 1.67
APLP2-222ENST00000533860 CUL7Q14999 1698 aa25.45■■□□□ 1.66
APLP2-222ENST00000533860 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
APLP2-222ENST00000533860 TNIKQ9UKE5 1360 aa25.39■■□□□ 1.65
APLP2-222ENST00000533860 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
APLP2-222ENST00000533860 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
APLP2-222ENST00000533860 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
APLP2-222ENST00000533860 FHAD1B1AJZ9 1412 aa25.31■■□□□ 1.64
APLP2-222ENST00000533860 MAGI1Q96QZ7 1491 aaPredicted RBP25.24■■□□□ 1.63
APLP2-222ENST00000533860 CEP162Q5TB80 1403 aa25.24■■□□□ 1.63
APLP2-222ENST00000533860 CTTNBP2Q8WZ74 1663 aa25.17■■□□□ 1.62
APLP2-222ENST00000533860 SYNJ2O15056 1496 aa25.16■■□□□ 1.62
APLP2-222ENST00000533860 GRIN2AQ12879 1464 aa25.14■■□□□ 1.62
APLP2-222ENST00000533860 CLIP1P30622 1438 aa25.11■■□□□ 1.61
APLP2-222ENST00000533860 RANGAP1P46060 587 aaPredicted RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms