RNA–Protein interactions for RNA: ENST00000533809.2

LMO7-225, Transcript of LIM domain 7, humanhuman

TSL 4

Gene LMO7, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-225ENST00000533809 NISCHQ9Y2I1 1504 aa34.54■■■■□ 3.12
LMO7-225ENST00000533809 ABCC9O60706 1549 aa31.24■■■□□ 2.59
LMO7-225ENST00000533809 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.59
LMO7-225ENST00000533809 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
LMO7-225ENST00000533809 NACADO15069 1562 aa29.43■■■□□ 2.3
LMO7-225ENST00000533809 DNAJC5BQ9UF47 199 aa29.43■■■□□ 2.3
LMO7-225ENST00000533809 UNC13AQ9UPW8 1703 aa29.26■■■□□ 2.27
LMO7-225ENST00000533809 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
LMO7-225ENST00000533809 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
LMO7-225ENST00000533809 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
LMO7-225ENST00000533809 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
LMO7-225ENST00000533809 ZCCHC6Q5VYS8 1495 aaKnown RBP28.61■■■□□ 2.17
LMO7-225ENST00000533809 AEBP2Q6ZN18 517 aaPredicted RBP28.57■■■□□ 2.16
LMO7-225ENST00000533809 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
LMO7-225ENST00000533809 SHROOM4Q9ULL8 1493 aa28.41■■■□□ 2.14
LMO7-225ENST00000533809 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
LMO7-225ENST00000533809 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
LMO7-225ENST00000533809 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
LMO7-225ENST00000533809 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.09
LMO7-225ENST00000533809 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
LMO7-225ENST00000533809 DNAJC5Q9H3Z4 198 aa27.11■■□□□ 1.93
LMO7-225ENST00000533809 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
LMO7-225ENST00000533809 ATAD2BQ9ULI0 1458 aa27.04■■□□□ 1.92
LMO7-225ENST00000533809 CUX2O14529 1486 aa27■■□□□ 1.91
LMO7-225ENST00000533809 HMGXB3Q12766 1538 aa26.99■■□□□ 1.91
LMO7-225ENST00000533809 CHIC1Q5VXU3 224 aa26.98■■□□□ 1.91
LMO7-225ENST00000533809 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
LMO7-225ENST00000533809 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
LMO7-225ENST00000533809 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
LMO7-225ENST00000533809 NESP48681 1621 aa26.82■■□□□ 1.88
LMO7-225ENST00000533809 PEG3Q9GZU2 1588 aa26.79■■□□□ 1.88
LMO7-225ENST00000533809 BAZ1BQ9UIG0 1483 aaKnown RBP26.75■■□□□ 1.87
LMO7-225ENST00000533809 THOC2Q8NI27 1593 aaKnown RBP26.69■■□□□ 1.86
LMO7-225ENST00000533809 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
LMO7-225ENST00000533809 LAMC3Q9Y6N6 1575 aa26.62■■□□□ 1.85
LMO7-225ENST00000533809 KIF21AQ7Z4S6 1674 aa26.6■■□□□ 1.85
LMO7-225ENST00000533809 WIZO95785 1651 aa26.37■■□□□ 1.81
LMO7-225ENST00000533809 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
LMO7-225ENST00000533809 CADPSQ9ULU8 1353 aa26.24■■□□□ 1.79
LMO7-225ENST00000533809 WDR62O43379 1518 aa26.21■■□□□ 1.79
LMO7-225ENST00000533809 MRC2Q9UBG0 1479 aa26.2■■□□□ 1.78
LMO7-225ENST00000533809 CEP164Q9UPV0 1460 aa26.05■■□□□ 1.76
LMO7-225ENST00000533809 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
LMO7-225ENST00000533809 TOP2AP11388 1531 aaKnown RBP25.97■■□□□ 1.75
LMO7-225ENST00000533809 CFTRP13569 1480 aa25.97■■□□□ 1.75
LMO7-225ENST00000533809 PRDM2Q13029 1718 aa25.95■■□□□ 1.74
LMO7-225ENST00000533809 RSF1Q96T23 1441 aaPredicted RBP25.94■■□□□ 1.74
LMO7-225ENST00000533809 URB2Q14146 1524 aaKnown RBP25.85■■□□□ 1.73
LMO7-225ENST00000533809 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
LMO7-225ENST00000533809 CCDC88BA6NC98 1476 aa25.62■■□□□ 1.69
LMO7-225ENST00000533809 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
LMO7-225ENST00000533809 ZNF608Q9ULD9 1512 aaPredicted RBP25.55■■□□□ 1.68
LMO7-225ENST00000533809 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
LMO7-225ENST00000533809 IFT140Q96RY7 1462 aa25.52■■□□□ 1.68
LMO7-225ENST00000533809 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
LMO7-225ENST00000533809 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
LMO7-225ENST00000533809 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
LMO7-225ENST00000533809 EIF4G3O43432 1585 aaKnown RBP25.48■■□□□ 1.67
LMO7-225ENST00000533809 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
LMO7-225ENST00000533809 CHD1O14646 1710 aa25.4■■□□□ 1.66
LMO7-225ENST00000533809 TARBP1Q13395 1621 aaKnown RBP25.39■■□□□ 1.66
LMO7-225ENST00000533809 ABCC8Q09428 1581 aa25.39■■□□□ 1.65
LMO7-225ENST00000533809 ARHGEF11O15085 1522 aa25.35■■□□□ 1.65
LMO7-225ENST00000533809 POLA1P09884 1462 aaPredicted RBP25.24■■□□□ 1.63
LMO7-225ENST00000533809 AQRO60306 1485 aaKnown RBP eCLIP25.23■■□□□ 1.63
LMO7-225ENST00000533809 RAD54L2Q9Y4B4 1467 aa25.14■■□□□ 1.61
LMO7-225ENST00000533809 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
LMO7-225ENST00000533809 WDR97A6NE52 1622 aa25.09■■□□□ 1.61
LMO7-225ENST00000533809 FGD5Q6ZNL6 1462 aa25.06■■□□□ 1.6
LMO7-225ENST00000533809 CUX1P39880 1505 aa25.04■■□□□ 1.6
LMO7-225ENST00000533809 SOGA1O94964 1423 aa25.03■■□□□ 1.6
LMO7-225ENST00000533809 CYB5RLQ6IPT4 315 aa25.02■■□□□ 1.6
LMO7-225ENST00000533809 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
LMO7-225ENST00000533809 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
LMO7-225ENST00000533809 TDRD9Q8NDG6 1382 aaKnown RBP25.01■■□□□ 1.59
LMO7-225ENST00000533809 PBRM1Q86U86 1689 aa24.97■■□□□ 1.59
LMO7-225ENST00000533809 FBLN2P98095 1184 aa24.97■■□□□ 1.59
LMO7-225ENST00000533809 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
LMO7-225ENST00000533809 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
LMO7-225ENST00000533809 GRIN2BQ13224 1484 aa24.88■■□□□ 1.57
LMO7-225ENST00000533809 ABCA5Q8WWZ7 1642 aa24.84■■□□□ 1.57
LMO7-225ENST00000533809 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
LMO7-225ENST00000533809 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
LMO7-225ENST00000533809 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
LMO7-225ENST00000533809 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
LMO7-225ENST00000533809 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
LMO7-225ENST00000533809 BIVM-ERCC5R4GMW8 1640 aa24.67■■□□□ 1.54
LMO7-225ENST00000533809 ADAMTS12P58397 1594 aa24.65■■□□□ 1.54
LMO7-225ENST00000533809 SUPT5HO00267 1087 aaKnown RBP24.62■■□□□ 1.53
LMO7-225ENST00000533809 ERCC6L2Q5T890 1561 aa24.62■■□□□ 1.53
LMO7-225ENST00000533809 TOP2BQ02880 1626 aa24.61■■□□□ 1.53
LMO7-225ENST00000533809 GRIN2AQ12879 1464 aa24.6■■□□□ 1.53
LMO7-225ENST00000533809 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
LMO7-225ENST00000533809 SHROOM2Q13796 1616 aa24.54■■□□□ 1.52
LMO7-225ENST00000533809 WRNQ14191 1432 aaPredicted RBP eCLIP24.53■■□□□ 1.52
LMO7-225ENST00000533809 NUP160Q12769 1436 aa24.52■■□□□ 1.52
LMO7-225ENST00000533809 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.5
LMO7-225ENST00000533809 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
LMO7-225ENST00000533809 KIF13AQ9H1H9 1805 aa24.4■■□□□ 1.5
LMO7-225ENST00000533809 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms