RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 NISCHQ9Y2I1 1504 aa41.21■■■■■ 4.19
FGFR1-239ENST00000533619 CCDC180Q9P1Z9 1646 aa36.6■■■■□ 3.45
FGFR1-239ENST00000533619 ABCC9O60706 1549 aa35.65■■■■□ 3.3
FGFR1-239ENST00000533619 DCAF8L2P0C7V8 631 aa34.44■■■■□ 3.1
FGFR1-239ENST00000533619 NACADO15069 1562 aa34.4■■■■□ 3.1
FGFR1-239ENST00000533619 RB1CC1Q8TDY2 1594 aa34.4■■■■□ 3.1
FGFR1-239ENST00000533619 ZCCHC6Q5VYS8 1495 aaKnown RBP34.33■■■■□ 3.09
FGFR1-239ENST00000533619 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
FGFR1-239ENST00000533619 DCAF1Q9Y4B6 1507 aa34.14■■■■□ 3.06
FGFR1-239ENST00000533619 UNC13AQ9UPW8 1703 aa33.58■■■□□ 2.97
FGFR1-239ENST00000533619 PABPN1Q86U42 306 aaKnown RBP eCLIP33.35■■■□□ 2.934e-6■□□□□ 9.3
FGFR1-239ENST00000533619 SCRIBQ14160 1630 aa33.34■■■□□ 2.93
FGFR1-239ENST00000533619 BICRAQ9NZM4 1560 aa33.29■■■□□ 2.92
FGFR1-239ENST00000533619 SHROOM4Q9ULL8 1493 aa33.04■■■□□ 2.88
FGFR1-239ENST00000533619 DNAJC5BQ9UF47 199 aa32.6■■■□□ 2.81
FGFR1-239ENST00000533619 EIF4G1Q04637 1599 aaKnown RBP32.43■■■□□ 2.78
FGFR1-239ENST00000533619 CC2D2AQ9P2K1 1620 aa32.27■■■□□ 2.76
FGFR1-239ENST00000533619 CECR2Q9BXF3 1484 aa32.04■■■□□ 2.72
FGFR1-239ENST00000533619 BAZ1AQ9NRL2 1556 aaPredicted RBP31.95■■■□□ 2.71
FGFR1-239ENST00000533619 SMARCA4P51532 1647 aa31.93■■■□□ 2.7
FGFR1-239ENST00000533619 SMARCA2P51531 1590 aa31.75■■■□□ 2.67
FGFR1-239ENST00000533619 NCAPD3P42695 1498 aa31.74■■■□□ 2.67
FGFR1-239ENST00000533619 ATAD2BQ9ULI0 1458 aa31.74■■■□□ 2.67
FGFR1-239ENST00000533619 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
FGFR1-239ENST00000533619 PEG3Q9GZU2 1588 aa31.64■■■□□ 2.66
FGFR1-239ENST00000533619 HMGXB3Q12766 1538 aa31.57■■■□□ 2.64
FGFR1-239ENST00000533619 BAZ1BQ9UIG0 1483 aaKnown RBP31.5■■■□□ 2.63
FGFR1-239ENST00000533619 RSF1Q96T23 1441 aaPredicted RBP31.43■■■□□ 2.62
FGFR1-239ENST00000533619 WIZO95785 1651 aa31.4■■■□□ 2.62
FGFR1-239ENST00000533619 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
FGFR1-239ENST00000533619 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
FGFR1-239ENST00000533619 NESP48681 1621 aa30.86■■■□□ 2.53
FGFR1-239ENST00000533619 CADPSQ9ULU8 1353 aa30.82■■■□□ 2.52
FGFR1-239ENST00000533619 ERCC6Q03468 1493 aa30.76■■■□□ 2.52
FGFR1-239ENST00000533619 SUPT5HO00267 1087 aaKnown RBP30.76■■■□□ 2.51
FGFR1-239ENST00000533619 CCDC88BA6NC98 1476 aa30.73■■■□□ 2.51
FGFR1-239ENST00000533619 PDS5BQ9NTI5 1447 aa30.7■■■□□ 2.5
FGFR1-239ENST00000533619 CFTRP13569 1480 aa30.64■■■□□ 2.5
FGFR1-239ENST00000533619 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
FGFR1-239ENST00000533619 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
FGFR1-239ENST00000533619 PRDM2Q13029 1718 aa30.44■■■□□ 2.46
FGFR1-239ENST00000533619 CUX2O14529 1486 aa30.4■■■□□ 2.46
FGFR1-239ENST00000533619 CEP164Q9UPV0 1460 aa30.4■■■□□ 2.46
FGFR1-239ENST00000533619 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
FGFR1-239ENST00000533619 MRC2Q9UBG0 1479 aa30.32■■■□□ 2.44
FGFR1-239ENST00000533619 WDR62O43379 1518 aa30.21■■■□□ 2.43
FGFR1-239ENST00000533619 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
FGFR1-239ENST00000533619 ABCC8Q09428 1581 aa30.06■■■□□ 2.4
FGFR1-239ENST00000533619 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
FGFR1-239ENST00000533619 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
FGFR1-239ENST00000533619 IFT140Q96RY7 1462 aa29.77■■■□□ 2.36
FGFR1-239ENST00000533619 CUX1P39880 1505 aa29.75■■■□□ 2.35
FGFR1-239ENST00000533619 POLA1P09884 1462 aaPredicted RBP29.71■■■□□ 2.35
FGFR1-239ENST00000533619 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
FGFR1-239ENST00000533619 FGD5Q6ZNL6 1462 aa29.65■■■□□ 2.34
FGFR1-239ENST00000533619 SOGA1O94964 1423 aa29.63■■■□□ 2.33
FGFR1-239ENST00000533619 TARBP1Q13395 1621 aaKnown RBP29.61■■■□□ 2.33
FGFR1-239ENST00000533619 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
FGFR1-239ENST00000533619 RAD54L2Q9Y4B4 1467 aa29.56■■■□□ 2.32
FGFR1-239ENST00000533619 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
FGFR1-239ENST00000533619 ZNF608Q9ULD9 1512 aaPredicted RBP29.55■■■□□ 2.32
FGFR1-239ENST00000533619 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
FGFR1-239ENST00000533619 EIF4G3O43432 1585 aaKnown RBP29.46■■■□□ 2.31
FGFR1-239ENST00000533619 WDR97A6NE52 1622 aa29.45■■■□□ 2.31
FGFR1-239ENST00000533619 AQRO60306 1485 aaKnown RBP eCLIP29.44■■■□□ 2.3
FGFR1-239ENST00000533619 TDRD9Q8NDG6 1382 aaKnown RBP29.42■■■□□ 2.3
FGFR1-239ENST00000533619 ABCA10Q8WWZ4 1543 aa29.39■■■□□ 2.3
FGFR1-239ENST00000533619 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
FGFR1-239ENST00000533619 GAPVD1Q14C86 1478 aa29.28■■■□□ 2.28
FGFR1-239ENST00000533619 GRIN2BQ13224 1484 aa29.26■■■□□ 2.27
FGFR1-239ENST00000533619 ABCA5Q8WWZ7 1642 aa29.23■■■□□ 2.27
FGFR1-239ENST00000533619 OSCARQ8IYS5 282 aa29.22■■■□□ 2.27
FGFR1-239ENST00000533619 PBRM1Q86U86 1689 aa29.18■■■□□ 2.26
FGFR1-239ENST00000533619 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
FGFR1-239ENST00000533619 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
FGFR1-239ENST00000533619 FBLN2P98095 1184 aa29.12■■■□□ 2.25
FGFR1-239ENST00000533619 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
FGFR1-239ENST00000533619 CHMP7Q8WUX9 453 aaPredicted RBP29.09■■■□□ 2.25
FGFR1-239ENST00000533619 CHD1O14646 1710 aa29.08■■■□□ 2.25
FGFR1-239ENST00000533619 ERICH3Q5RHP9 1530 aa29.06■■■□□ 2.24
FGFR1-239ENST00000533619 KIF27Q86VH2 1401 aa29.06■■■□□ 2.24
FGFR1-239ENST00000533619 SYNJ2O15056 1496 aa29.05■■■□□ 2.24
FGFR1-239ENST00000533619 FHAD1B1AJZ9 1412 aa28.95■■■□□ 2.23
FGFR1-239ENST00000533619 ADAMTS12P58397 1594 aa28.94■■■□□ 2.22
FGFR1-239ENST00000533619 IGF1RP08069 1367 aa28.9■■■□□ 2.22
FGFR1-239ENST00000533619 GRIN2AQ12879 1464 aa28.87■■■□□ 2.21
FGFR1-239ENST00000533619 CUL7Q14999 1698 aa28.82■■■□□ 2.2
FGFR1-239ENST00000533619 CHIC1Q5VXU3 224 aa28.77■■■□□ 2.2
FGFR1-239ENST00000533619 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
FGFR1-239ENST00000533619 CARMIL1Q5VZK9 1371 aa28.75■■■□□ 2.19
FGFR1-239ENST00000533619 RUSC2Q8N2Y8 1516 aa28.74■■■□□ 2.19
FGFR1-239ENST00000533619 NUP160Q12769 1436 aa28.73■■■□□ 2.19
FGFR1-239ENST00000533619 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
FGFR1-239ENST00000533619 ARHGEF11O15085 1522 aa28.65■■■□□ 2.18
FGFR1-239ENST00000533619 RIMBP3CA6NJZ7 1639 aa28.64■■■□□ 2.18
FGFR1-239ENST00000533619 RIMBP3BA6NNM3 1639 aa28.64■■■□□ 2.18
FGFR1-239ENST00000533619 RIMBP3Q9UFD9 1639 aa28.64■■■□□ 2.18
FGFR1-239ENST00000533619 EEA1Q15075 1411 aa28.6■■■□□ 2.17
FGFR1-239ENST00000533619 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
FGFR1-239ENST00000533619 CSRNP3Q8WYN3 585 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms