RNA–Protein interactions for RNA: ENST00000533574.1

ABCA7-217, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 4

Gene ABCA7, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-217ENST00000533574 NISCHQ9Y2I1 1504 aa40.94■■■■■ 4.14
ABCA7-217ENST00000533574 CCDC180Q9P1Z9 1646 aa36.7■■■■□ 3.47
ABCA7-217ENST00000533574 ABCC9O60706 1549 aa36.49■■■■□ 3.43
ABCA7-217ENST00000533574 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
ABCA7-217ENST00000533574 NACADO15069 1562 aa34.62■■■■□ 3.13
ABCA7-217ENST00000533574 DCAF8L2P0C7V8 631 aa34.36■■■■□ 3.09
ABCA7-217ENST00000533574 MYO15BQ96JP2 1530 aa34.23■■■■□ 3.07
ABCA7-217ENST00000533574 UNC13AQ9UPW8 1703 aa34.05■■■■□ 3.04
ABCA7-217ENST00000533574 DNAJC5BQ9UF47 199 aa34.02■■■■□ 3.04
ABCA7-217ENST00000533574 ZCCHC6Q5VYS8 1495 aaKnown RBP34■■■■□ 3.03
ABCA7-217ENST00000533574 PABPN1Q86U42 306 aaKnown RBP eCLIP33.95■■■■□ 3.03
ABCA7-217ENST00000533574 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
ABCA7-217ENST00000533574 BICRAQ9NZM4 1560 aa33.82■■■■□ 3
ABCA7-217ENST00000533574 SCRIBQ14160 1630 aa33.44■■■□□ 2.94
ABCA7-217ENST00000533574 SHROOM4Q9ULL8 1493 aa33.41■■■□□ 2.94
ABCA7-217ENST00000533574 CC2D2AQ9P2K1 1620 aa32.99■■■□□ 2.87
ABCA7-217ENST00000533574 EIF4G1Q04637 1599 aaKnown RBP32.98■■■□□ 2.87
ABCA7-217ENST00000533574 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
ABCA7-217ENST00000533574 NCAPD3P42695 1498 aa31.95■■■□□ 2.7
ABCA7-217ENST00000533574 SMARCA4P51532 1647 aa31.93■■■□□ 2.7
ABCA7-217ENST00000533574 ATAD2BQ9ULI0 1458 aa31.88■■■□□ 2.69
ABCA7-217ENST00000533574 SMARCA2P51531 1590 aa31.82■■■□□ 2.68
ABCA7-217ENST00000533574 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
ABCA7-217ENST00000533574 HMGXB3Q12766 1538 aa31.77■■■□□ 2.68
ABCA7-217ENST00000533574 PEG3Q9GZU2 1588 aa31.62■■■□□ 2.65
ABCA7-217ENST00000533574 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
ABCA7-217ENST00000533574 MROH2BQ7Z745 1585 aa31.56■■■□□ 2.64
ABCA7-217ENST00000533574 ERCC6Q03468 1493 aa31.49■■■□□ 2.63
ABCA7-217ENST00000533574 NESP48681 1621 aa31.4■■■□□ 2.62
ABCA7-217ENST00000533574 CUX2O14529 1486 aa31.4■■■□□ 2.62
ABCA7-217ENST00000533574 LAMC3Q9Y6N6 1575 aa31.23■■■□□ 2.59
ABCA7-217ENST00000533574 WIZO95785 1651 aa31.18■■■□□ 2.58
ABCA7-217ENST00000533574 THOC2Q8NI27 1593 aaKnown RBP31.1■■■□□ 2.57
ABCA7-217ENST00000533574 DNAJC5Q9H3Z4 198 aa31.1■■■□□ 2.57
ABCA7-217ENST00000533574 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
ABCA7-217ENST00000533574 PDS5BQ9NTI5 1447 aa31■■■□□ 2.55
ABCA7-217ENST00000533574 CADPSQ9ULU8 1353 aa30.97■■■□□ 2.55
ABCA7-217ENST00000533574 RSF1Q96T23 1441 aaPredicted RBP30.94■■■□□ 2.54
ABCA7-217ENST00000533574 TOP2AP11388 1531 aaKnown RBP30.82■■■□□ 2.52
ABCA7-217ENST00000533574 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.51
ABCA7-217ENST00000533574 WDR62O43379 1518 aa30.7■■■□□ 2.51
ABCA7-217ENST00000533574 CFTRP13569 1480 aa30.68■■■□□ 2.5
ABCA7-217ENST00000533574 CEP164Q9UPV0 1460 aa30.67■■■□□ 2.5
ABCA7-217ENST00000533574 FANCD2Q9BXW9 1451 aa30.64■■■□□ 2.5
ABCA7-217ENST00000533574 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
ABCA7-217ENST00000533574 PRDM2Q13029 1718 aa30.42■■■□□ 2.46
ABCA7-217ENST00000533574 URB2Q14146 1524 aaKnown RBP30.39■■■□□ 2.46
ABCA7-217ENST00000533574 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
ABCA7-217ENST00000533574 IFT140Q96RY7 1462 aa30.05■■■□□ 2.4
ABCA7-217ENST00000533574 DNMBPQ6XZF7 1577 aa30.02■■■□□ 2.4
ABCA7-217ENST00000533574 ABCC8Q09428 1581 aa30.01■■■□□ 2.39
ABCA7-217ENST00000533574 ZNF608Q9ULD9 1512 aaPredicted RBP29.98■■■□□ 2.39
ABCA7-217ENST00000533574 OSCARQ8IYS5 282 aa29.9■■■□□ 2.38
ABCA7-217ENST00000533574 EIF4G3O43432 1585 aaKnown RBP29.87■■■□□ 2.37
ABCA7-217ENST00000533574 TARBP1Q13395 1621 aaKnown RBP29.83■■■□□ 2.37
ABCA7-217ENST00000533574 TRIM41Q8WV44 630 aa29.81■■■□□ 2.36
ABCA7-217ENST00000533574 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
ABCA7-217ENST00000533574 AQRO60306 1485 aaKnown RBP eCLIP29.7■■■□□ 2.351e-7■■■■■ 32.3
ABCA7-217ENST00000533574 RAD54L2Q9Y4B4 1467 aa29.66■■■□□ 2.34
ABCA7-217ENST00000533574 CUX1P39880 1505 aa29.65■■■□□ 2.34
ABCA7-217ENST00000533574 FGD5Q6ZNL6 1462 aa29.63■■■□□ 2.33
ABCA7-217ENST00000533574 SOGA1O94964 1423 aa29.62■■■□□ 2.33
ABCA7-217ENST00000533574 SUPT5HO00267 1087 aaKnown RBP29.62■■■□□ 2.33
ABCA7-217ENST00000533574 RIMBP3CA6NJZ7 1639 aa29.59■■■□□ 2.33
ABCA7-217ENST00000533574 RIMBP3BA6NNM3 1639 aa29.59■■■□□ 2.33
ABCA7-217ENST00000533574 RIMBP3Q9UFD9 1639 aa29.59■■■□□ 2.33
ABCA7-217ENST00000533574 CHD1O14646 1710 aa29.59■■■□□ 2.33
ABCA7-217ENST00000533574 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
ABCA7-217ENST00000533574 TDRD9Q8NDG6 1382 aaKnown RBP29.54■■■□□ 2.32
ABCA7-217ENST00000533574 ARHGEF11O15085 1522 aa29.51■■■□□ 2.32
ABCA7-217ENST00000533574 SNAPC4Q5SXM2 1469 aa29.45■■■□□ 2.31
ABCA7-217ENST00000533574 FBLN2P98095 1184 aa29.42■■■□□ 2.3
ABCA7-217ENST00000533574 MAGI1Q96QZ7 1491 aaPredicted RBP29.38■■■□□ 2.29
ABCA7-217ENST00000533574 GRIN2BQ13224 1484 aa29.37■■■□□ 2.29
ABCA7-217ENST00000533574 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
ABCA7-217ENST00000533574 PBRM1Q86U86 1689 aa29.31■■■□□ 2.28
ABCA7-217ENST00000533574 ABCA5Q8WWZ7 1642 aa29.29■■■□□ 2.28
ABCA7-217ENST00000533574 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
ABCA7-217ENST00000533574 CLASP1Q7Z460 1538 aa29.27■■■□□ 2.28
ABCA7-217ENST00000533574 SYNJ2O15056 1496 aa29.27■■■□□ 2.28
ABCA7-217ENST00000533574 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
ABCA7-217ENST00000533574 CHMP7Q8WUX9 453 aaPredicted RBP29.24■■■□□ 2.27
ABCA7-217ENST00000533574 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
ABCA7-217ENST00000533574 ARAP1Q96P48 1450 aa29.23■■■□□ 2.27
ABCA7-217ENST00000533574 TOP2BQ02880 1626 aa29.22■■■□□ 2.27
ABCA7-217ENST00000533574 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.26
ABCA7-217ENST00000533574 CYB5RLQ6IPT4 315 aa29.19■■■□□ 2.26
ABCA7-217ENST00000533574 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
ABCA7-217ENST00000533574 GRIN2AQ12879 1464 aa29.02■■■□□ 2.24
ABCA7-217ENST00000533574 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
ABCA7-217ENST00000533574 FHAD1B1AJZ9 1412 aa28.93■■■□□ 2.22
ABCA7-217ENST00000533574 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
ABCA7-217ENST00000533574 NUP160Q12769 1436 aa28.91■■■□□ 2.22
ABCA7-217ENST00000533574 ERCC6L2Q5T890 1561 aa28.82■■■□□ 2.2
ABCA7-217ENST00000533574 TRHP20396 242 aaPredicted RBP28.81■■■□□ 2.2
ABCA7-217ENST00000533574 SHROOM2Q13796 1616 aa28.78■■■□□ 2.2
ABCA7-217ENST00000533574 RUSC2Q8N2Y8 1516 aa28.66■■■□□ 2.18
ABCA7-217ENST00000533574 KIF27Q86VH2 1401 aa28.61■■■□□ 2.17
ABCA7-217ENST00000533574 CUL7Q14999 1698 aa28.58■■■□□ 2.17
ABCA7-217ENST00000533574 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms