RNA–Protein interactions for RNA: ENST00000533542.5

ZNF143-217, Transcript of zinc finger protein 143, humanhuman

TSL 4

Gene ZNF143, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF143-217ENST00000533542 NISCHQ9Y2I1 1504 aa23.91■■□□□ 1.42
ZNF143-217ENST00000533542 ABCC9O60706 1549 aa21.61■■□□□ 1.05
ZNF143-217ENST00000533542 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.05
ZNF143-217ENST00000533542 RB1CC1Q8TDY2 1594 aa20.58■□□□□ 0.88
ZNF143-217ENST00000533542 NACADO15069 1562 aa20.41■□□□□ 0.86
ZNF143-217ENST00000533542 DNAJC5BQ9UF47 199 aa20.37■□□□□ 0.85
ZNF143-217ENST00000533542 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
ZNF143-217ENST00000533542 DCAF8L2P0C7V8 631 aa20.11■□□□□ 0.81
ZNF143-217ENST00000533542 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
ZNF143-217ENST00000533542 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
ZNF143-217ENST00000533542 BICRAQ9NZM4 1560 aa19.97■□□□□ 0.79
ZNF143-217ENST00000533542 ZCCHC6Q5VYS8 1495 aaKnown RBP19.8■□□□□ 0.76
ZNF143-217ENST00000533542 DCAF1Q9Y4B6 1507 aa19.8■□□□□ 0.76
ZNF143-217ENST00000533542 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
ZNF143-217ENST00000533542 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
ZNF143-217ENST00000533542 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
ZNF143-217ENST00000533542 CECR2Q9BXF3 1484 aa19.51■□□□□ 0.71
ZNF143-217ENST00000533542 EIF4G1Q04637 1599 aaKnown RBP19.49■□□□□ 0.71
ZNF143-217ENST00000533542 DNAJC5Q9H3Z4 198 aa18.86■□□□□ 0.61
ZNF143-217ENST00000533542 NCAPD3P42695 1498 aa18.83■□□□□ 0.6
ZNF143-217ENST00000533542 CUX2O14529 1486 aa18.77■□□□□ 0.59
ZNF143-217ENST00000533542 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
ZNF143-217ENST00000533542 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
ZNF143-217ENST00000533542 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
ZNF143-217ENST00000533542 SMARCA4P51532 1647 aa18.7■□□□□ 0.58
ZNF143-217ENST00000533542 ERCC6Q03468 1493 aa18.68■□□□□ 0.58
ZNF143-217ENST00000533542 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
ZNF143-217ENST00000533542 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
ZNF143-217ENST00000533542 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
ZNF143-217ENST00000533542 NESP48681 1621 aa18.52■□□□□ 0.55
ZNF143-217ENST00000533542 LAMC3Q9Y6N6 1575 aa18.45■□□□□ 0.54
ZNF143-217ENST00000533542 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
ZNF143-217ENST00000533542 MROH2BQ7Z745 1585 aa18.39■□□□□ 0.53
ZNF143-217ENST00000533542 KIF21AQ7Z4S6 1674 aa18.33■□□□□ 0.52
ZNF143-217ENST00000533542 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
ZNF143-217ENST00000533542 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
ZNF143-217ENST00000533542 WIZO95785 1651 aa18.17■□□□□ 0.5
ZNF143-217ENST00000533542 MRC2Q9UBG0 1479 aa18.16■□□□□ 0.5
ZNF143-217ENST00000533542 WDR62O43379 1518 aa18.15■□□□□ 0.5
ZNF143-217ENST00000533542 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
ZNF143-217ENST00000533542 CFTRP13569 1480 aa18.01■□□□□ 0.47
ZNF143-217ENST00000533542 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
ZNF143-217ENST00000533542 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
ZNF143-217ENST00000533542 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
ZNF143-217ENST00000533542 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
ZNF143-217ENST00000533542 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
ZNF143-217ENST00000533542 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
ZNF143-217ENST00000533542 OSCARQ8IYS5 282 aa17.81■□□□□ 0.44
ZNF143-217ENST00000533542 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
ZNF143-217ENST00000533542 IFT140Q96RY7 1462 aa17.71■□□□□ 0.43
ZNF143-217ENST00000533542 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
ZNF143-217ENST00000533542 ZNF608Q9ULD9 1512 aaPredicted RBP17.66■□□□□ 0.42
ZNF143-217ENST00000533542 ABCC8Q09428 1581 aa17.66■□□□□ 0.42
ZNF143-217ENST00000533542 RIMBP3CA6NJZ7 1639 aa17.63■□□□□ 0.41
ZNF143-217ENST00000533542 RIMBP3BA6NNM3 1639 aa17.63■□□□□ 0.41
ZNF143-217ENST00000533542 RIMBP3Q9UFD9 1639 aa17.63■□□□□ 0.41
ZNF143-217ENST00000533542 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
ZNF143-217ENST00000533542 EIF4G3O43432 1585 aaKnown RBP17.6■□□□□ 0.41
ZNF143-217ENST00000533542 ARHGEF11O15085 1522 aa17.56■□□□□ 0.4
ZNF143-217ENST00000533542 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
ZNF143-217ENST00000533542 CHD1O14646 1710 aa17.48■□□□□ 0.39
ZNF143-217ENST00000533542 POLA1P09884 1462 aaPredicted RBP17.48■□□□□ 0.39
ZNF143-217ENST00000533542 AQRO60306 1485 aaKnown RBP eCLIP17.47■□□□□ 0.39
ZNF143-217ENST00000533542 WDR97A6NE52 1622 aa17.41■□□□□ 0.38
ZNF143-217ENST00000533542 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
ZNF143-217ENST00000533542 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
ZNF143-217ENST00000533542 CYB5RLQ6IPT4 315 aa17.37■□□□□ 0.37
ZNF143-217ENST00000533542 SOGA1O94964 1423 aa17.37■□□□□ 0.37
ZNF143-217ENST00000533542 FBLN2P98095 1184 aa17.34■□□□□ 0.37
ZNF143-217ENST00000533542 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.37
ZNF143-217ENST00000533542 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
ZNF143-217ENST00000533542 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
ZNF143-217ENST00000533542 CUX1P39880 1505 aa17.3■□□□□ 0.36
ZNF143-217ENST00000533542 CLASP1Q7Z460 1538 aa17.3■□□□□ 0.36
ZNF143-217ENST00000533542 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
ZNF143-217ENST00000533542 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
ZNF143-217ENST00000533542 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
ZNF143-217ENST00000533542 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
ZNF143-217ENST00000533542 SYNJ2O15056 1496 aa17.23■□□□□ 0.35
ZNF143-217ENST00000533542 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
ZNF143-217ENST00000533542 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
ZNF143-217ENST00000533542 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
ZNF143-217ENST00000533542 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
ZNF143-217ENST00000533542 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
ZNF143-217ENST00000533542 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
ZNF143-217ENST00000533542 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
ZNF143-217ENST00000533542 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
ZNF143-217ENST00000533542 ADAMTS12P58397 1594 aa17.02■□□□□ 0.32
ZNF143-217ENST00000533542 TOP2BQ02880 1626 aa17.01■□□□□ 0.31
ZNF143-217ENST00000533542 NUP160Q12769 1436 aa17■□□□□ 0.31
ZNF143-217ENST00000533542 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
ZNF143-217ENST00000533542 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
ZNF143-217ENST00000533542 SHROOM2Q13796 1616 aa16.96■□□□□ 0.31
ZNF143-217ENST00000533542 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.3
ZNF143-217ENST00000533542 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.3
ZNF143-217ENST00000533542 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
ZNF143-217ENST00000533542 AEBP2Q6ZN18 517 aaPredicted RBP16.84■□□□□ 0.29
ZNF143-217ENST00000533542 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
ZNF143-217ENST00000533542 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
ZNF143-217ENST00000533542 KIF13AQ9H1H9 1805 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms