RNA–Protein interactions for RNA: ENST00000533439.1

EIF3M-213, Transcript of eukaryotic translation initiation factor 3 subunit M, humanhuman

TSL 5

Gene EIF3M, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3M-213ENST00000533439 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
EIF3M-213ENST00000533439 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
EIF3M-213ENST00000533439 ABCC9O60706 1549 aa32.78■■■□□ 2.84
EIF3M-213ENST00000533439 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
EIF3M-213ENST00000533439 NACADO15069 1562 aa31.15■■■□□ 2.58
EIF3M-213ENST00000533439 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
EIF3M-213ENST00000533439 MYO15BQ96JP2 1530 aa30.8■■■□□ 2.52
EIF3M-213ENST00000533439 UNC13AQ9UPW8 1703 aa30.8■■■□□ 2.52
EIF3M-213ENST00000533439 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.52
EIF3M-213ENST00000533439 DCAF1Q9Y4B6 1507 aa30.54■■■□□ 2.48
EIF3M-213ENST00000533439 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
EIF3M-213ENST00000533439 BICRAQ9NZM4 1560 aa30.48■■■□□ 2.47
EIF3M-213ENST00000533439 DNAJC5BQ9UF47 199 aa30.46■■■□□ 2.47
EIF3M-213ENST00000533439 SCRIBQ14160 1630 aa30.24■■■□□ 2.43
EIF3M-213ENST00000533439 SHROOM4Q9ULL8 1493 aa29.94■■■□□ 2.38
EIF3M-213ENST00000533439 EIF4G1Q04637 1599 aaKnown RBP29.65■■■□□ 2.34
EIF3M-213ENST00000533439 CC2D2AQ9P2K1 1620 aa29.65■■■□□ 2.34
EIF3M-213ENST00000533439 CECR2Q9BXF3 1484 aa29.46■■■□□ 2.31
EIF3M-213ENST00000533439 SMARCA4P51532 1647 aa28.85■■■□□ 2.21
EIF3M-213ENST00000533439 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
EIF3M-213ENST00000533439 ATAD2BQ9ULI0 1458 aa28.73■■■□□ 2.19
EIF3M-213ENST00000533439 BAZ1AQ9NRL2 1556 aaPredicted RBP28.68■■■□□ 2.18
EIF3M-213ENST00000533439 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
EIF3M-213ENST00000533439 HMGXB3Q12766 1538 aa28.6■■■□□ 2.17
EIF3M-213ENST00000533439 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
EIF3M-213ENST00000533439 PEG3Q9GZU2 1588 aa28.53■■■□□ 2.16
EIF3M-213ENST00000533439 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
EIF3M-213ENST00000533439 NESP48681 1621 aa28.29■■■□□ 2.12
EIF3M-213ENST00000533439 WIZO95785 1651 aa28.29■■■□□ 2.12
EIF3M-213ENST00000533439 ERCC6Q03468 1493 aa28.22■■■□□ 2.11
EIF3M-213ENST00000533439 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
EIF3M-213ENST00000533439 CUX2O14529 1486 aa28.05■■■□□ 2.08
EIF3M-213ENST00000533439 RSF1Q96T23 1441 aaPredicted RBP28.04■■■□□ 2.08
EIF3M-213ENST00000533439 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
EIF3M-213ENST00000533439 THOC2Q8NI27 1593 aaKnown RBP27.97■■■□□ 2.07
EIF3M-213ENST00000533439 TOP2AP11388 1531 aaKnown RBP27.88■■■□□ 2.05
EIF3M-213ENST00000533439 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
EIF3M-213ENST00000533439 PDS5BQ9NTI5 1447 aa27.83■■■□□ 2.05
EIF3M-213ENST00000533439 CFTRP13569 1480 aa27.65■■■□□ 2.02
EIF3M-213ENST00000533439 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.02
EIF3M-213ENST00000533439 DNAJC5Q9H3Z4 198 aa27.62■■■□□ 2.01
EIF3M-213ENST00000533439 WDR62O43379 1518 aa27.6■■■□□ 2.01
EIF3M-213ENST00000533439 FANCD2Q9BXW9 1451 aa27.59■■■□□ 2.01
EIF3M-213ENST00000533439 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
EIF3M-213ENST00000533439 PRDM2Q13029 1718 aa27.55■■■□□ 2
EIF3M-213ENST00000533439 CCDC88BA6NC98 1476 aa27.54■■■□□ 2
EIF3M-213ENST00000533439 URB2Q14146 1524 aaKnown RBP27.4■■□□□ 1.98
EIF3M-213ENST00000533439 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
EIF3M-213ENST00000533439 DNMBPQ6XZF7 1577 aa27.07■■□□□ 1.92
EIF3M-213ENST00000533439 ZNF608Q9ULD9 1512 aaPredicted RBP27.01■■□□□ 1.91
EIF3M-213ENST00000533439 IFT140Q96RY7 1462 aa27■■□□□ 1.91
EIF3M-213ENST00000533439 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
EIF3M-213ENST00000533439 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
EIF3M-213ENST00000533439 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
EIF3M-213ENST00000533439 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
EIF3M-213ENST00000533439 POLA1P09884 1462 aaPredicted RBP26.88■■□□□ 1.89
EIF3M-213ENST00000533439 CUX1P39880 1505 aa26.82■■□□□ 1.88
EIF3M-213ENST00000533439 RAD54L2Q9Y4B4 1467 aa26.8■■□□□ 1.88
EIF3M-213ENST00000533439 AQRO60306 1485 aaKnown RBP eCLIP26.77■■□□□ 1.884e-7■□□□□ 8.6
EIF3M-213ENST00000533439 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
EIF3M-213ENST00000533439 OSCARQ8IYS5 282 aa26.75■■□□□ 1.87
EIF3M-213ENST00000533439 SOGA1O94964 1423 aa26.7■■□□□ 1.86
EIF3M-213ENST00000533439 CHD1O14646 1710 aa26.7■■□□□ 1.86
EIF3M-213ENST00000533439 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
EIF3M-213ENST00000533439 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
EIF3M-213ENST00000533439 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
EIF3M-213ENST00000533439 RIMBP3CA6NJZ7 1639 aa26.54■■□□□ 1.84
EIF3M-213ENST00000533439 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
EIF3M-213ENST00000533439 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
EIF3M-213ENST00000533439 SNAPC4Q5SXM2 1469 aa26.53■■□□□ 1.84
EIF3M-213ENST00000533439 PBRM1Q86U86 1689 aa26.5■■□□□ 1.83
EIF3M-213ENST00000533439 BIVM-ERCC5R4GMW8 1640 aa26.5■■□□□ 1.83
EIF3M-213ENST00000533439 SYNJ1O43426 1573 aa26.49■■□□□ 1.83
EIF3M-213ENST00000533439 TOP2BQ02880 1626 aa26.46■■□□□ 1.83
EIF3M-213ENST00000533439 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
EIF3M-213ENST00000533439 ARHGEF11O15085 1522 aa26.45■■□□□ 1.83
EIF3M-213ENST00000533439 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
EIF3M-213ENST00000533439 FBLN2P98095 1184 aa26.45■■□□□ 1.82
EIF3M-213ENST00000533439 GRIN2BQ13224 1484 aa26.44■■□□□ 1.82
EIF3M-213ENST00000533439 WRNQ14191 1432 aaPredicted RBP eCLIP26.42■■□□□ 1.82
EIF3M-213ENST00000533439 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
EIF3M-213ENST00000533439 GAPVD1Q14C86 1478 aa26.41■■□□□ 1.82
EIF3M-213ENST00000533439 SYNJ2O15056 1496 aa26.33■■□□□ 1.81
EIF3M-213ENST00000533439 CLASP1Q7Z460 1538 aa26.32■■□□□ 1.8
EIF3M-213ENST00000533439 CHMP7Q8WUX9 453 aaPredicted RBP26.28■■□□□ 1.8
EIF3M-213ENST00000533439 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
EIF3M-213ENST00000533439 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
EIF3M-213ENST00000533439 CYB5RLQ6IPT4 315 aa26.15■■□□□ 1.78
EIF3M-213ENST00000533439 GRIN2AQ12879 1464 aa26.14■■□□□ 1.78
EIF3M-213ENST00000533439 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
EIF3M-213ENST00000533439 CEP170Q5SW79 1584 aa26.1■■□□□ 1.77
EIF3M-213ENST00000533439 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
EIF3M-213ENST00000533439 NUP160Q12769 1436 aa26.03■■□□□ 1.76
EIF3M-213ENST00000533439 ERCC6L2Q5T890 1561 aa26■■□□□ 1.75
EIF3M-213ENST00000533439 SHROOM2Q13796 1616 aa25.94■■□□□ 1.74
EIF3M-213ENST00000533439 RUSC2Q8N2Y8 1516 aa25.86■■□□□ 1.73
EIF3M-213ENST00000533439 KIF27Q86VH2 1401 aa25.86■■□□□ 1.73
EIF3M-213ENST00000533439 CUL7Q14999 1698 aa25.83■■□□□ 1.73
EIF3M-213ENST00000533439 IGF1RP08069 1367 aa25.82■■□□□ 1.72
EIF3M-213ENST00000533439 TRHP20396 242 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms