RNA–Protein interactions for RNA: ENST00000533391.5

PITPNM1-215, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 4

Gene PITPNM1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-215ENST00000533391 NISCHQ9Y2I1 1504 aa40.56■■■■■ 4.08
PITPNM1-215ENST00000533391 CCDC180Q9P1Z9 1646 aa35.7■■■■□ 3.31
PITPNM1-215ENST00000533391 ABCC9O60706 1549 aa34.45■■■■□ 3.1
PITPNM1-215ENST00000533391 ZCCHC6Q5VYS8 1495 aaKnown RBP33.92■■■■□ 3.02
PITPNM1-215ENST00000533391 DCAF8L2P0C7V8 631 aa33.72■■■□□ 2.99
PITPNM1-215ENST00000533391 DCAF1Q9Y4B6 1507 aa33.51■■■□□ 2.95
PITPNM1-215ENST00000533391 NACADO15069 1562 aa33.42■■■□□ 2.94
PITPNM1-215ENST00000533391 MYO15BQ96JP2 1530 aa33.38■■■□□ 2.93
PITPNM1-215ENST00000533391 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
PITPNM1-215ENST00000533391 SCRIBQ14160 1630 aa32.76■■■□□ 2.83
PITPNM1-215ENST00000533391 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
PITPNM1-215ENST00000533391 SHROOM4Q9ULL8 1493 aa32.6■■■□□ 2.81
PITPNM1-215ENST00000533391 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
PITPNM1-215ENST00000533391 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.77
PITPNM1-215ENST00000533391 CECR2Q9BXF3 1484 aa31.61■■■□□ 2.65
PITPNM1-215ENST00000533391 DNAJC5BQ9UF47 199 aa31.49■■■□□ 2.63
PITPNM1-215ENST00000533391 EIF4G1Q04637 1599 aaKnown RBP31.42■■■□□ 2.62
PITPNM1-215ENST00000533391 BAZ1AQ9NRL2 1556 aaPredicted RBP31.35■■■□□ 2.61
PITPNM1-215ENST00000533391 SMARCA4P51532 1647 aa31.35■■■□□ 2.61
PITPNM1-215ENST00000533391 MROH2BQ7Z745 1585 aa31.33■■■□□ 2.61
PITPNM1-215ENST00000533391 RSF1Q96T23 1441 aaPredicted RBP31.18■■■□□ 2.58
PITPNM1-215ENST00000533391 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
PITPNM1-215ENST00000533391 WIZO95785 1651 aa31.04■■■□□ 2.56
PITPNM1-215ENST00000533391 ATAD2BQ9ULI0 1458 aa31.01■■■□□ 2.55
PITPNM1-215ENST00000533391 PEG3Q9GZU2 1588 aa30.97■■■□□ 2.55
PITPNM1-215ENST00000533391 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
PITPNM1-215ENST00000533391 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
PITPNM1-215ENST00000533391 NCAPD3P42695 1498 aa30.85■■■□□ 2.53
PITPNM1-215ENST00000533391 BAZ1BQ9UIG0 1483 aaKnown RBP30.77■■■□□ 2.52
PITPNM1-215ENST00000533391 HMGXB3Q12766 1538 aa30.74■■■□□ 2.51
PITPNM1-215ENST00000533391 TOP2AP11388 1531 aaKnown RBP30.68■■■□□ 2.5
PITPNM1-215ENST00000533391 CCDC88BA6NC98 1476 aa30.37■■■□□ 2.45
PITPNM1-215ENST00000533391 NESP48681 1621 aa30.03■■■□□ 2.4
PITPNM1-215ENST00000533391 CADPSQ9ULU8 1353 aa30.01■■■□□ 2.39
PITPNM1-215ENST00000533391 CFTRP13569 1480 aa29.96■■■□□ 2.39
PITPNM1-215ENST00000533391 LAMC3Q9Y6N6 1575 aa29.91■■■□□ 2.38
PITPNM1-215ENST00000533391 PRDM2Q13029 1718 aa29.77■■■□□ 2.36
PITPNM1-215ENST00000533391 PDS5BQ9NTI5 1447 aa29.69■■■□□ 2.34
PITPNM1-215ENST00000533391 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
PITPNM1-215ENST00000533391 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
PITPNM1-215ENST00000533391 ERCC6Q03468 1493 aa29.57■■■□□ 2.32
PITPNM1-215ENST00000533391 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
PITPNM1-215ENST00000533391 ABCC8Q09428 1581 aa29.5■■■□□ 2.31
PITPNM1-215ENST00000533391 MRC2Q9UBG0 1479 aa29.39■■■□□ 2.3
PITPNM1-215ENST00000533391 URB2Q14146 1524 aaKnown RBP29.38■■■□□ 2.29
PITPNM1-215ENST00000533391 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
PITPNM1-215ENST00000533391 WRNQ14191 1432 aaPredicted RBP eCLIP29.36■■■□□ 2.29
PITPNM1-215ENST00000533391 CUX1P39880 1505 aa29.35■■■□□ 2.29
PITPNM1-215ENST00000533391 SYNJ1O43426 1573 aa29.3■■■□□ 2.28
PITPNM1-215ENST00000533391 TOPBP1Q92547 1522 aa29.29■■■□□ 2.28
PITPNM1-215ENST00000533391 DNMBPQ6XZF7 1577 aa29.28■■■□□ 2.28
PITPNM1-215ENST00000533391 CHIC1Q5VXU3 224 aa29.27■■■□□ 2.28
PITPNM1-215ENST00000533391 WDR62O43379 1518 aa29.26■■■□□ 2.27
PITPNM1-215ENST00000533391 TOP2BQ02880 1626 aa29.21■■■□□ 2.27
PITPNM1-215ENST00000533391 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.27
PITPNM1-215ENST00000533391 TRIM41Q8WV44 630 aa29.14■■■□□ 2.26
PITPNM1-215ENST00000533391 FGD5Q6ZNL6 1462 aa29.12■■■□□ 2.25
PITPNM1-215ENST00000533391 DNAJC5Q9H3Z4 198 aa29.1■■■□□ 2.25
PITPNM1-215ENST00000533391 POLA1P09884 1462 aaPredicted RBP29.08■■■□□ 2.25
PITPNM1-215ENST00000533391 CUX2O14529 1486 aa29.03■■■□□ 2.24
PITPNM1-215ENST00000533391 RAD54L2Q9Y4B4 1467 aa29.02■■■□□ 2.24
PITPNM1-215ENST00000533391 SOGA1O94964 1423 aa28.97■■■□□ 2.23
PITPNM1-215ENST00000533391 TARBP1Q13395 1621 aaKnown RBP28.91■■■□□ 2.22
PITPNM1-215ENST00000533391 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
PITPNM1-215ENST00000533391 WDR97A6NE52 1622 aa28.83■■■□□ 2.21
PITPNM1-215ENST00000533391 ABCA10Q8WWZ4 1543 aa28.83■■■□□ 2.21
PITPNM1-215ENST00000533391 ZNF608Q9ULD9 1512 aaPredicted RBP28.8■■■□□ 2.2
PITPNM1-215ENST00000533391 TDRD9Q8NDG6 1382 aaKnown RBP28.77■■■□□ 2.2
PITPNM1-215ENST00000533391 RUSC2Q8N2Y8 1516 aa28.75■■■□□ 2.19
PITPNM1-215ENST00000533391 AQRO60306 1485 aaKnown RBP eCLIP28.72■■■□□ 2.19
PITPNM1-215ENST00000533391 ABCA5Q8WWZ7 1642 aa28.68■■■□□ 2.18
PITPNM1-215ENST00000533391 EIF4G3O43432 1585 aaKnown RBP28.67■■■□□ 2.18
PITPNM1-215ENST00000533391 KIF27Q86VH2 1401 aa28.67■■■□□ 2.18
PITPNM1-215ENST00000533391 FAM9AQ8IZU1 332 aaPredicted RBP28.64■■■□□ 2.18
PITPNM1-215ENST00000533391 GAPVD1Q14C86 1478 aa28.64■■■□□ 2.17
PITPNM1-215ENST00000533391 PBRM1Q86U86 1689 aa28.55■■■□□ 2.16
PITPNM1-215ENST00000533391 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
PITPNM1-215ENST00000533391 IGF1RP08069 1367 aa28.52■■■□□ 2.16
PITPNM1-215ENST00000533391 EEA1Q15075 1411 aa28.51■■■□□ 2.15
PITPNM1-215ENST00000533391 CSRNP3Q8WYN3 585 aa28.47■■■□□ 2.15
PITPNM1-215ENST00000533391 ERICH3Q5RHP9 1530 aa28.47■■■□□ 2.15
PITPNM1-215ENST00000533391 SNAPC4Q5SXM2 1469 aa28.45■■■□□ 2.14
PITPNM1-215ENST00000533391 ADAMTS12P58397 1594 aa28.36■■■□□ 2.13
PITPNM1-215ENST00000533391 CARMIL1Q5VZK9 1371 aa28.36■■■□□ 2.13
PITPNM1-215ENST00000533391 MAGI1Q96QZ7 1491 aaPredicted RBP28.35■■■□□ 2.13
PITPNM1-215ENST00000533391 CUL7Q14999 1698 aa28.34■■■□□ 2.13
PITPNM1-215ENST00000533391 FHAD1B1AJZ9 1412 aa28.31■■■□□ 2.12
PITPNM1-215ENST00000533391 PRXQ9BXM0 1461 aa28.31■■■□□ 2.12
PITPNM1-215ENST00000533391 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
PITPNM1-215ENST00000533391 SYNJ2O15056 1496 aa28.26■■■□□ 2.11
PITPNM1-215ENST00000533391 RAPGEF2Q9Y4G8 1499 aa28.24■■■□□ 2.11
PITPNM1-215ENST00000533391 FBLN2P98095 1184 aa28.24■■■□□ 2.11
PITPNM1-215ENST00000533391 KIF21BO75037 1637 aa28.22■■■□□ 2.11
PITPNM1-215ENST00000533391 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
PITPNM1-215ENST00000533391 CHD1O14646 1710 aa28.21■■■□□ 2.11
PITPNM1-215ENST00000533391 GRIN2AQ12879 1464 aa28.18■■■□□ 2.1
PITPNM1-215ENST00000533391 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.1
PITPNM1-215ENST00000533391 GOLGA3Q08378 1498 aa28.11■■■□□ 2.09
PITPNM1-215ENST00000533391 CEP170Q5SW79 1584 aa28.05■■■□□ 2.08
PITPNM1-215ENST00000533391 UBTFP17480 764 aaKnown RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms