RNA–Protein interactions for RNA: ENST00000533368.1

FNTA-211, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 2

Gene FNTA, Length 534 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-211ENST00000533368 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
FNTA-211ENST00000533368 CCDC180Q9P1Z9 1646 aa23.31■■□□□ 1.32
FNTA-211ENST00000533368 ZCCHC6Q5VYS8 1495 aaKnown RBP22.29■■□□□ 1.16
FNTA-211ENST00000533368 ABCC9O60706 1549 aa22.29■■□□□ 1.16
FNTA-211ENST00000533368 DCAF8L2P0C7V8 631 aa22.14■■□□□ 1.13
FNTA-211ENST00000533368 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
FNTA-211ENST00000533368 MYO15BQ96JP2 1530 aa21.88■■□□□ 1.09
FNTA-211ENST00000533368 NACADO15069 1562 aa21.82■■□□□ 1.08
FNTA-211ENST00000533368 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
FNTA-211ENST00000533368 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
FNTA-211ENST00000533368 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
FNTA-211ENST00000533368 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
FNTA-211ENST00000533368 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
FNTA-211ENST00000533368 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
FNTA-211ENST00000533368 CECR2Q9BXF3 1484 aa20.66■□□□□ 0.9
FNTA-211ENST00000533368 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
FNTA-211ENST00000533368 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
FNTA-211ENST00000533368 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
FNTA-211ENST00000533368 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
FNTA-211ENST00000533368 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
FNTA-211ENST00000533368 EIF4G1Q04637 1599 aaKnown RBP20.39■□□□□ 0.85
FNTA-211ENST00000533368 WIZO95785 1651 aa20.31■□□□□ 0.84
FNTA-211ENST00000533368 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
FNTA-211ENST00000533368 PEG3Q9GZU2 1588 aa20.26■□□□□ 0.83
FNTA-211ENST00000533368 ATAD2BQ9ULI0 1458 aa20.25■□□□□ 0.83
FNTA-211ENST00000533368 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
FNTA-211ENST00000533368 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
FNTA-211ENST00000533368 CC2D2AQ9P2K1 1620 aa20.14■□□□□ 0.81
FNTA-211ENST00000533368 NCAPD3P42695 1498 aa20.14■□□□□ 0.81
FNTA-211ENST00000533368 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
FNTA-211ENST00000533368 CCDC88BA6NC98 1476 aa19.95■□□□□ 0.78
FNTA-211ENST00000533368 DNAJC5BQ9UF47 199 aa19.86■□□□□ 0.77
FNTA-211ENST00000533368 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
FNTA-211ENST00000533368 CFTRP13569 1480 aa19.6■□□□□ 0.73
FNTA-211ENST00000533368 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
FNTA-211ENST00000533368 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
FNTA-211ENST00000533368 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
FNTA-211ENST00000533368 NESP48681 1621 aa19.45■□□□□ 0.7
FNTA-211ENST00000533368 PRDM2Q13029 1718 aa19.41■□□□□ 0.7
FNTA-211ENST00000533368 PDS5BQ9NTI5 1447 aa19.41■□□□□ 0.7
FNTA-211ENST00000533368 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
FNTA-211ENST00000533368 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
FNTA-211ENST00000533368 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
FNTA-211ENST00000533368 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
FNTA-211ENST00000533368 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
FNTA-211ENST00000533368 CUX1P39880 1505 aa19.21■□□□□ 0.67
FNTA-211ENST00000533368 TOP2BQ02880 1626 aa19.21■□□□□ 0.67
FNTA-211ENST00000533368 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
FNTA-211ENST00000533368 KIF21AQ7Z4S6 1674 aa19.18■□□□□ 0.66
FNTA-211ENST00000533368 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
FNTA-211ENST00000533368 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
FNTA-211ENST00000533368 MRC2Q9UBG0 1479 aa19.13■□□□□ 0.65
FNTA-211ENST00000533368 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
FNTA-211ENST00000533368 TOPBP1Q92547 1522 aa19.12■□□□□ 0.65
FNTA-211ENST00000533368 FGD5Q6ZNL6 1462 aa19.07■□□□□ 0.64
FNTA-211ENST00000533368 FAM9AQ8IZU1 332 aaPredicted RBP19.04■□□□□ 0.64
FNTA-211ENST00000533368 SOGA1O94964 1423 aa19.01■□□□□ 0.63
FNTA-211ENST00000533368 EEA1Q15075 1411 aa19.01■□□□□ 0.63
FNTA-211ENST00000533368 POLA1P09884 1462 aaPredicted RBP19.01■□□□□ 0.63
FNTA-211ENST00000533368 WDR62O43379 1518 aa19■□□□□ 0.63
FNTA-211ENST00000533368 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
FNTA-211ENST00000533368 KIF27Q86VH2 1401 aa18.95■□□□□ 0.62
FNTA-211ENST00000533368 RAD54L2Q9Y4B4 1467 aa18.94■□□□□ 0.62
FNTA-211ENST00000533368 CUX2O14529 1486 aa18.92■□□□□ 0.62
FNTA-211ENST00000533368 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
FNTA-211ENST00000533368 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
FNTA-211ENST00000533368 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
FNTA-211ENST00000533368 IFT140Q96RY7 1462 aa18.87■□□□□ 0.61
FNTA-211ENST00000533368 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
FNTA-211ENST00000533368 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
FNTA-211ENST00000533368 TDRD9Q8NDG6 1382 aaKnown RBP18.8■□□□□ 0.6
FNTA-211ENST00000533368 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
FNTA-211ENST00000533368 IGF1RP08069 1367 aa18.77■□□□□ 0.6
FNTA-211ENST00000533368 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.59
FNTA-211ENST00000533368 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
FNTA-211ENST00000533368 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
FNTA-211ENST00000533368 AQRO60306 1485 aaKnown RBP eCLIP18.71■□□□□ 0.599e-7■■■□□ 18.2
FNTA-211ENST00000533368 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
FNTA-211ENST00000533368 ZNF608Q9ULD9 1512 aaPredicted RBP18.7■□□□□ 0.58
FNTA-211ENST00000533368 KIF21BO75037 1637 aa18.7■□□□□ 0.58
FNTA-211ENST00000533368 PRXQ9BXM0 1461 aa18.7■□□□□ 0.58
FNTA-211ENST00000533368 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
FNTA-211ENST00000533368 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
FNTA-211ENST00000533368 UBTFP17480 764 aaKnown RBP18.68■□□□□ 0.58
FNTA-211ENST00000533368 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
FNTA-211ENST00000533368 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
FNTA-211ENST00000533368 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.57
FNTA-211ENST00000533368 CUL7Q14999 1698 aa18.63■□□□□ 0.57
FNTA-211ENST00000533368 TNIKQ9UKE5 1360 aa18.6■□□□□ 0.57
FNTA-211ENST00000533368 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
FNTA-211ENST00000533368 FHAD1B1AJZ9 1412 aa18.57■□□□□ 0.56
FNTA-211ENST00000533368 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
FNTA-211ENST00000533368 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
FNTA-211ENST00000533368 ADAMTS12P58397 1594 aa18.52■□□□□ 0.56
FNTA-211ENST00000533368 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
FNTA-211ENST00000533368 SYNJ2O15056 1496 aa18.46■□□□□ 0.55
FNTA-211ENST00000533368 CEP162Q5TB80 1403 aa18.46■□□□□ 0.55
FNTA-211ENST00000533368 FBLN2P98095 1184 aa18.45■□□□□ 0.54
FNTA-211ENST00000533368 GRIN2AQ12879 1464 aa18.42■□□□□ 0.54
FNTA-211ENST00000533368 RANGAP1P46060 587 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 1426 ms