RNA–Protein interactions for RNA: ENST00000533317.5

EDA-212, Transcript of ectodysplasin A, humanhuman

TSL 1 (best)

Gene EDA, Length 1,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDA-212ENST00000533317 NISCHQ9Y2I1 1504 aa53.63■■■■■ 6.18
EDA-212ENST00000533317 CCDC180Q9P1Z9 1646 aa47.04■■■■■ 5.12
EDA-212ENST00000533317 ZCCHC6Q5VYS8 1495 aaKnown RBP44.96■■■■■ 4.79
EDA-212ENST00000533317 ABCC9O60706 1549 aa44.72■■■■■ 4.75
EDA-212ENST00000533317 DCAF1Q9Y4B6 1507 aa44.43■■■■■ 4.7
EDA-212ENST00000533317 DCAF8L2P0C7V8 631 aa44.3■■■■■ 4.68
EDA-212ENST00000533317 MYO15BQ96JP2 1530 aa44.09■■■■■ 4.65
EDA-212ENST00000533317 NACADO15069 1562 aa43.91■■■■■ 4.62
EDA-212ENST00000533317 RB1CC1Q8TDY2 1594 aa43.61■■■■■ 4.57
EDA-212ENST00000533317 SHROOM4Q9ULL8 1493 aa43.26■■■■■ 4.52
EDA-212ENST00000533317 SCRIBQ14160 1630 aa43.06■■■■■ 4.48
EDA-212ENST00000533317 UNC13AQ9UPW8 1703 aa42.65■■■■■ 4.42
EDA-212ENST00000533317 BICRAQ9NZM4 1560 aa42.24■■■■■ 4.35
EDA-212ENST00000533317 PABPN1Q86U42 306 aaKnown RBP eCLIP42.05■■■■■ 4.32
EDA-212ENST00000533317 CECR2Q9BXF3 1484 aa41.63■■■■■ 4.25
EDA-212ENST00000533317 BAZ1AQ9NRL2 1556 aaPredicted RBP41.47■■■■■ 4.23
EDA-212ENST00000533317 SUPT5HO00267 1087 aaKnown RBP41.45■■■■■ 4.23
EDA-212ENST00000533317 RSF1Q96T23 1441 aaPredicted RBP41.4■■■■■ 4.22
EDA-212ENST00000533317 MROH2BQ7Z745 1585 aa41.36■■■■■ 4.21
EDA-212ENST00000533317 SMARCA4P51532 1647 aa41.31■■■■■ 4.2
EDA-212ENST00000533317 EIF4G1Q04637 1599 aaKnown RBP41.02■■■■■ 4.16
EDA-212ENST00000533317 WIZO95785 1651 aa40.99■■■■■ 4.15
EDA-212ENST00000533317 PEG3Q9GZU2 1588 aa40.88■■■■■ 4.13
EDA-212ENST00000533317 SMARCA2P51531 1590 aa40.75■■■■■ 4.11
EDA-212ENST00000533317 ATAD2BQ9ULI0 1458 aa40.74■■■■■ 4.11
EDA-212ENST00000533317 TOP2AP11388 1531 aaKnown RBP40.62■■■■■ 4.09
EDA-212ENST00000533317 CC2D2AQ9P2K1 1620 aa40.51■■■■■ 4.08
EDA-212ENST00000533317 NCAPD3P42695 1498 aa40.51■■■■■ 4.07
EDA-212ENST00000533317 BAZ1BQ9UIG0 1483 aaKnown RBP40.48■■■■■ 4.07
EDA-212ENST00000533317 HMGXB3Q12766 1538 aa40.42■■■■■ 4.06
EDA-212ENST00000533317 CCDC88BA6NC98 1476 aa40.16■■■■■ 4.02
EDA-212ENST00000533317 DNAJC5BQ9UF47 199 aa39.8■■■■□ 3.96
EDA-212ENST00000533317 CHIC1Q5VXU3 224 aa39.5■■■■□ 3.91
EDA-212ENST00000533317 CFTRP13569 1480 aa39.47■■■■□ 3.91
EDA-212ENST00000533317 CADPSQ9ULU8 1353 aa39.41■■■■□ 3.9
EDA-212ENST00000533317 PRDM2Q13029 1718 aa39.27■■■■□ 3.88
EDA-212ENST00000533317 LAMC3Q9Y6N6 1575 aa39.2■■■■□ 3.87
EDA-212ENST00000533317 ABCC8Q09428 1581 aa39.12■■■■□ 3.85
EDA-212ENST00000533317 NESP48681 1621 aa39.11■■■■□ 3.85
EDA-212ENST00000533317 TRIM41Q8WV44 630 aa39.08■■■■□ 3.85
EDA-212ENST00000533317 WRNQ14191 1432 aaPredicted RBP eCLIP39■■■■□ 3.83
EDA-212ENST00000533317 FANCD2Q9BXW9 1451 aa38.95■■■■□ 3.83
EDA-212ENST00000533317 PDS5BQ9NTI5 1447 aa38.91■■■■□ 3.82
EDA-212ENST00000533317 SYNJ1O43426 1573 aa38.82■■■■□ 3.8
EDA-212ENST00000533317 CEP164Q9UPV0 1460 aa38.76■■■■□ 3.8
EDA-212ENST00000533317 TOP2BQ02880 1626 aa38.75■■■■□ 3.79
EDA-212ENST00000533317 BIVM-ERCC5R4GMW8 1640 aa38.73■■■■□ 3.79
EDA-212ENST00000533317 CUX1P39880 1505 aa38.71■■■■□ 3.79
EDA-212ENST00000533317 KIF21AQ7Z4S6 1674 aa38.68■■■■□ 3.78
EDA-212ENST00000533317 DNMBPQ6XZF7 1577 aa38.55■■■■□ 3.76
EDA-212ENST00000533317 TOPBP1Q92547 1522 aa38.48■■■■□ 3.75
EDA-212ENST00000533317 URB2Q14146 1524 aaKnown RBP38.47■■■■□ 3.75
EDA-212ENST00000533317 ERCC6Q03468 1493 aa38.44■■■■□ 3.74
EDA-212ENST00000533317 MRC2Q9UBG0 1479 aa38.41■■■■□ 3.74
EDA-212ENST00000533317 FGD5Q6ZNL6 1462 aa38.36■■■■□ 3.73
EDA-212ENST00000533317 SOGA1O94964 1423 aa38.31■■■■□ 3.72
EDA-212ENST00000533317 EEA1Q15075 1411 aa38.28■■■■□ 3.72
EDA-212ENST00000533317 POLA1P09884 1462 aaPredicted RBP38.26■■■■□ 3.71
EDA-212ENST00000533317 FAM9AQ8IZU1 332 aaPredicted RBP38.24■■■■□ 3.71
EDA-212ENST00000533317 WDR62O43379 1518 aa38.24■■■■□ 3.71
EDA-212ENST00000533317 THOC2Q8NI27 1593 aaKnown RBP38.19■■■■□ 3.7
EDA-212ENST00000533317 RUSC2Q8N2Y8 1516 aa38.17■■■■□ 3.7
EDA-212ENST00000533317 RAD54L2Q9Y4B4 1467 aa38.08■■■■□ 3.69
EDA-212ENST00000533317 KIF27Q86VH2 1401 aa38.08■■■■□ 3.69
EDA-212ENST00000533317 ABCA10Q8WWZ4 1543 aa38.06■■■■□ 3.68
EDA-212ENST00000533317 CSRNP3Q8WYN3 585 aa38.04■■■■□ 3.68
EDA-212ENST00000533317 CUX2O14529 1486 aa38.03■■■■□ 3.68
EDA-212ENST00000533317 WDR97A6NE52 1622 aa37.96■■■■□ 3.67
EDA-212ENST00000533317 TARBP1Q13395 1621 aaKnown RBP37.95■■■■□ 3.67
EDA-212ENST00000533317 LOC105371045A0A1W2PR82 267 aa37.9■■■■□ 3.66
EDA-212ENST00000533317 IFT140Q96RY7 1462 aa37.9■■■■□ 3.66
EDA-212ENST00000533317 ABCA5Q8WWZ7 1642 aa37.77■■■■□ 3.64
EDA-212ENST00000533317 KIF21BO75037 1637 aa37.76■■■■□ 3.64
EDA-212ENST00000533317 IGF1RP08069 1367 aa37.76■■■■□ 3.64
EDA-212ENST00000533317 TDRD9Q8NDG6 1382 aaKnown RBP37.75■■■■□ 3.63
EDA-212ENST00000533317 GAPVD1Q14C86 1478 aa37.71■■■■□ 3.63
EDA-212ENST00000533317 PRXQ9BXM0 1461 aa37.7■■■■□ 3.63
EDA-212ENST00000533317 GOLGA3Q08378 1498 aa37.67■■■■□ 3.62
EDA-212ENST00000533317 EHMT2Q96KQ7 1210 aa37.64■■■■□ 3.62
EDA-212ENST00000533317 ERICH3Q5RHP9 1530 aa37.63■■■■□ 3.61
EDA-212ENST00000533317 ZNF608Q9ULD9 1512 aaPredicted RBP37.61■■■■□ 3.61
EDA-212ENST00000533317 AQRO60306 1485 aaKnown RBP eCLIP37.59■■■■□ 3.61
EDA-212ENST00000533317 RAPGEF2Q9Y4G8 1499 aa37.57■■■■□ 3.6
EDA-212ENST00000533317 CARMIL1Q5VZK9 1371 aa37.57■■■■□ 3.6
EDA-212ENST00000533317 CUL7Q14999 1698 aa37.56■■■■□ 3.6
EDA-212ENST00000533317 PBRM1Q86U86 1689 aa37.53■■■■□ 3.6
EDA-212ENST00000533317 GRIN2BQ13224 1484 aa37.51■■■■□ 3.6
EDA-212ENST00000533317 EIF4G3O43432 1585 aaKnown RBP37.51■■■■□ 3.59
EDA-212ENST00000533317 UBTFP17480 764 aaKnown RBP37.48■■■■□ 3.59
EDA-212ENST00000533317 TNIKQ9UKE5 1360 aa37.48■■■■□ 3.59
EDA-212ENST00000533317 FHAD1B1AJZ9 1412 aa37.33■■■■□ 3.57
EDA-212ENST00000533317 ADAMTS12P58397 1594 aa37.3■■■■□ 3.56
EDA-212ENST00000533317 SNAPC4Q5SXM2 1469 aa37.26■■■■□ 3.56
EDA-212ENST00000533317 MAGI1Q96QZ7 1491 aaPredicted RBP37.26■■■■□ 3.56
EDA-212ENST00000533317 CEP162Q5TB80 1403 aa37.19■■■■□ 3.54
EDA-212ENST00000533317 SYNJ2O15056 1496 aa37.1■■■■□ 3.53
EDA-212ENST00000533317 CTTNBP2Q8WZ74 1663 aa37.04■■■■□ 3.52
EDA-212ENST00000533317 CLIP1P30622 1438 aa37.03■■■■□ 3.52
EDA-212ENST00000533317 GRIN2AQ12879 1464 aa37.03■■■■□ 3.52
EDA-212ENST00000533317 CHMP7Q8WUX9 453 aaPredicted RBP37.01■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms