RNA–Protein interactions for RNA: ENST00000533292.1

ACSM4-202, Transcript of acyl-CoA synthetase medium chain family member 4, humanhuman

TSL 3

Gene ACSM4, Length 710 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM4-202ENST00000533292 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
ACSM4-202ENST00000533292 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
ACSM4-202ENST00000533292 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
ACSM4-202ENST00000533292 CCDC180Q9P1Z9 1646 aa22.76■■□□□ 1.23
ACSM4-202ENST00000533292 ABCC9O60706 1549 aa21.91■■□□□ 1.1
ACSM4-202ENST00000533292 ZCCHC6Q5VYS8 1495 aaKnown RBP21.54■■□□□ 1.04
ACSM4-202ENST00000533292 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
ACSM4-202ENST00000533292 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
ACSM4-202ENST00000533292 NACADO15069 1562 aa21.4■■□□□ 1.02
ACSM4-202ENST00000533292 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1.01
ACSM4-202ENST00000533292 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
ACSM4-202ENST00000533292 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
ACSM4-202ENST00000533292 UNC13AQ9UPW8 1703 aa20.63■□□□□ 0.89
ACSM4-202ENST00000533292 BICRAQ9NZM4 1560 aa20.6■□□□□ 0.89
ACSM4-202ENST00000533292 SHROOM4Q9ULL8 1493 aa20.6■□□□□ 0.89
ACSM4-202ENST00000533292 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
ACSM4-202ENST00000533292 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
ACSM4-202ENST00000533292 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
ACSM4-202ENST00000533292 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
ACSM4-202ENST00000533292 BAZ1AQ9NRL2 1556 aaPredicted RBP19.97■□□□□ 0.79
ACSM4-202ENST00000533292 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
ACSM4-202ENST00000533292 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
ACSM4-202ENST00000533292 CC2D2AQ9P2K1 1620 aa19.85■□□□□ 0.77
ACSM4-202ENST00000533292 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
ACSM4-202ENST00000533292 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.76
ACSM4-202ENST00000533292 PEG3Q9GZU2 1588 aa19.79■□□□□ 0.76
ACSM4-202ENST00000533292 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
ACSM4-202ENST00000533292 ATAD2BQ9ULI0 1458 aa19.78■□□□□ 0.76
ACSM4-202ENST00000533292 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
ACSM4-202ENST00000533292 RSF1Q96T23 1441 aaPredicted RBP19.77■□□□□ 0.76
ACSM4-202ENST00000533292 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
ACSM4-202ENST00000533292 BAZ1BQ9UIG0 1483 aaKnown RBP19.59■□□□□ 0.73
ACSM4-202ENST00000533292 WIZO95785 1651 aa19.54■□□□□ 0.72
ACSM4-202ENST00000533292 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
ACSM4-202ENST00000533292 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
ACSM4-202ENST00000533292 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
ACSM4-202ENST00000533292 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
ACSM4-202ENST00000533292 CFTRP13569 1480 aa19.15■□□□□ 0.66
ACSM4-202ENST00000533292 LAMC3Q9Y6N6 1575 aa19.14■□□□□ 0.65
ACSM4-202ENST00000533292 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
ACSM4-202ENST00000533292 NESP48681 1621 aa19.04■□□□□ 0.64
ACSM4-202ENST00000533292 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
ACSM4-202ENST00000533292 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
ACSM4-202ENST00000533292 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
ACSM4-202ENST00000533292 PRDM2Q13029 1718 aa18.83■□□□□ 0.61
ACSM4-202ENST00000533292 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.6
ACSM4-202ENST00000533292 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
ACSM4-202ENST00000533292 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
ACSM4-202ENST00000533292 WDR62O43379 1518 aa18.7■□□□□ 0.58
ACSM4-202ENST00000533292 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
ACSM4-202ENST00000533292 CUX2O14529 1486 aa18.69■□□□□ 0.58
ACSM4-202ENST00000533292 URB2Q14146 1524 aaKnown RBP18.68■□□□□ 0.58
ACSM4-202ENST00000533292 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
ACSM4-202ENST00000533292 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
ACSM4-202ENST00000533292 DNMBPQ6XZF7 1577 aa18.64■□□□□ 0.57
ACSM4-202ENST00000533292 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
ACSM4-202ENST00000533292 CUX1P39880 1505 aa18.58■□□□□ 0.56
ACSM4-202ENST00000533292 TOP2BQ02880 1626 aa18.52■□□□□ 0.55
ACSM4-202ENST00000533292 POLA1P09884 1462 aaPredicted RBP18.5■□□□□ 0.55
ACSM4-202ENST00000533292 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
ACSM4-202ENST00000533292 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
ACSM4-202ENST00000533292 FGD5Q6ZNL6 1462 aa18.47■□□□□ 0.55
ACSM4-202ENST00000533292 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
ACSM4-202ENST00000533292 SOGA1O94964 1423 aa18.46■□□□□ 0.55
ACSM4-202ENST00000533292 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
ACSM4-202ENST00000533292 TRIM41Q8WV44 630 aa18.39■□□□□ 0.53
ACSM4-202ENST00000533292 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.53
ACSM4-202ENST00000533292 FOXD1Q16676 465 aa18.38■□□□□ 0.53
ACSM4-202ENST00000533292 RAD54L2Q9Y4B4 1467 aa18.37■□□□□ 0.53
ACSM4-202ENST00000533292 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
ACSM4-202ENST00000533292 ZNF608Q9ULD9 1512 aaPredicted RBP18.29■□□□□ 0.52
ACSM4-202ENST00000533292 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
ACSM4-202ENST00000533292 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.51
ACSM4-202ENST00000533292 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
ACSM4-202ENST00000533292 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
ACSM4-202ENST00000533292 GRIN2BQ13224 1484 aa18.22■□□□□ 0.51
ACSM4-202ENST00000533292 EIF4G3O43432 1585 aaKnown RBP18.2■□□□□ 0.5
ACSM4-202ENST00000533292 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
ACSM4-202ENST00000533292 ERICH3Q5RHP9 1530 aa18.17■□□□□ 0.5
ACSM4-202ENST00000533292 IGF1RP08069 1367 aa18.16■□□□□ 0.5
ACSM4-202ENST00000533292 MAGI1Q96QZ7 1491 aaPredicted RBP18.15■□□□□ 0.5
ACSM4-202ENST00000533292 EEA1Q15075 1411 aa18.15■□□□□ 0.5
ACSM4-202ENST00000533292 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
ACSM4-202ENST00000533292 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
ACSM4-202ENST00000533292 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
ACSM4-202ENST00000533292 RUSC2Q8N2Y8 1516 aa18.04■□□□□ 0.48
ACSM4-202ENST00000533292 CSRNP3Q8WYN3 585 aa18.04■□□□□ 0.48
ACSM4-202ENST00000533292 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
ACSM4-202ENST00000533292 CARMIL1Q5VZK9 1371 aa18.03■□□□□ 0.48
ACSM4-202ENST00000533292 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
ACSM4-202ENST00000533292 ADAMTS12P58397 1594 aa18■□□□□ 0.47
ACSM4-202ENST00000533292 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
ACSM4-202ENST00000533292 CUL7Q14999 1698 aa17.99■□□□□ 0.47
ACSM4-202ENST00000533292 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
ACSM4-202ENST00000533292 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
ACSM4-202ENST00000533292 FBLN2P98095 1184 aa17.95■□□□□ 0.46
ACSM4-202ENST00000533292 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
ACSM4-202ENST00000533292 NUP160Q12769 1436 aa17.91■□□□□ 0.46
ACSM4-202ENST00000533292 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
ACSM4-202ENST00000533292 CHD1O14646 1710 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms