RNA–Protein interactions for RNA: ENST00000533184.1

SHARPIN-207, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 3

Gene SHARPIN, Length 352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-207ENST00000533184 NISCHQ9Y2I1 1504 aa18.04■□□□□ 0.48
SHARPIN-207ENST00000533184 CCDC180Q9P1Z9 1646 aa15.84■□□□□ 0.13
SHARPIN-207ENST00000533184 ABCC9O60706 1549 aa15.58■□□□□ 0.09
SHARPIN-207ENST00000533184 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
SHARPIN-207ENST00000533184 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
SHARPIN-207ENST00000533184 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
SHARPIN-207ENST00000533184 NACADO15069 1562 aa14.87□□□□□ -0.03
SHARPIN-207ENST00000533184 DCAF1Q9Y4B6 1507 aa14.78□□□□□ -0.04
SHARPIN-207ENST00000533184 MYO15BQ96JP2 1530 aa14.72□□□□□ -0.05
SHARPIN-207ENST00000533184 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
SHARPIN-207ENST00000533184 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHARPIN-207ENST00000533184 SHROOM4Q9ULL8 1493 aa14.66□□□□□ -0.06
SHARPIN-207ENST00000533184 UNC13AQ9UPW8 1703 aa14.65□□□□□ -0.06
SHARPIN-207ENST00000533184 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
SHARPIN-207ENST00000533184 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
SHARPIN-207ENST00000533184 CECR2Q9BXF3 1484 aa14.17□□□□□ -0.14
SHARPIN-207ENST00000533184 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
SHARPIN-207ENST00000533184 CC2D2AQ9P2K1 1620 aa14.02□□□□□ -0.16
SHARPIN-207ENST00000533184 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
SHARPIN-207ENST00000533184 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
SHARPIN-207ENST00000533184 BAZ1AQ9NRL2 1556 aaPredicted RBP13.92□□□□□ -0.18
SHARPIN-207ENST00000533184 WIZO95785 1651 aa13.88□□□□□ -0.19
SHARPIN-207ENST00000533184 RSF1Q96T23 1441 aaPredicted RBP13.88□□□□□ -0.19
SHARPIN-207ENST00000533184 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
SHARPIN-207ENST00000533184 SUPT5HO00267 1087 aaKnown RBP13.84□□□□□ -0.19
SHARPIN-207ENST00000533184 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
SHARPIN-207ENST00000533184 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
SHARPIN-207ENST00000533184 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
SHARPIN-207ENST00000533184 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
SHARPIN-207ENST00000533184 HMGXB3Q12766 1538 aa13.67□□□□□ -0.22
SHARPIN-207ENST00000533184 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
SHARPIN-207ENST00000533184 NESP48681 1621 aa13.57□□□□□ -0.24
SHARPIN-207ENST00000533184 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
SHARPIN-207ENST00000533184 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
SHARPIN-207ENST00000533184 CFTRP13569 1480 aa13.35□□□□□ -0.27
SHARPIN-207ENST00000533184 LAMC3Q9Y6N6 1575 aa13.34□□□□□ -0.27
SHARPIN-207ENST00000533184 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
SHARPIN-207ENST00000533184 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
SHARPIN-207ENST00000533184 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
SHARPIN-207ENST00000533184 PDS5BQ9NTI5 1447 aa13.26□□□□□ -0.29
SHARPIN-207ENST00000533184 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
SHARPIN-207ENST00000533184 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
SHARPIN-207ENST00000533184 ABCC8Q09428 1581 aa13.2□□□□□ -0.3
SHARPIN-207ENST00000533184 THOC2Q8NI27 1593 aaKnown RBP13.19□□□□□ -0.3
SHARPIN-207ENST00000533184 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
SHARPIN-207ENST00000533184 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
SHARPIN-207ENST00000533184 CUX1P39880 1505 aa13.11□□□□□ -0.31
SHARPIN-207ENST00000533184 TOPBP1Q92547 1522 aa13.1□□□□□ -0.31
SHARPIN-207ENST00000533184 WDR62O43379 1518 aa13.09□□□□□ -0.31
SHARPIN-207ENST00000533184 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
SHARPIN-207ENST00000533184 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
SHARPIN-207ENST00000533184 DNMBPQ6XZF7 1577 aa13.05□□□□□ -0.32
SHARPIN-207ENST00000533184 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
SHARPIN-207ENST00000533184 CUX2O14529 1486 aa13.02□□□□□ -0.33
SHARPIN-207ENST00000533184 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
SHARPIN-207ENST00000533184 POLA1P09884 1462 aaPredicted RBP13□□□□□ -0.33
SHARPIN-207ENST00000533184 ZNF608Q9ULD9 1512 aaPredicted RBP12.98□□□□□ -0.33
SHARPIN-207ENST00000533184 TOP2BQ02880 1626 aa12.96□□□□□ -0.33
SHARPIN-207ENST00000533184 SOGA1O94964 1423 aa12.96□□□□□ -0.34
SHARPIN-207ENST00000533184 BIVM-ERCC5R4GMW8 1640 aa12.95□□□□□ -0.34
SHARPIN-207ENST00000533184 CHIC1Q5VXU3 224 aa12.95□□□□□ -0.34
SHARPIN-207ENST00000533184 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
SHARPIN-207ENST00000533184 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
SHARPIN-207ENST00000533184 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.344e-9■■■■■ 46.5
SHARPIN-207ENST00000533184 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
SHARPIN-207ENST00000533184 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
SHARPIN-207ENST00000533184 RUSC2Q8N2Y8 1516 aa12.87□□□□□ -0.35
SHARPIN-207ENST00000533184 FAM9AQ8IZU1 332 aaPredicted RBP12.86□□□□□ -0.35
SHARPIN-207ENST00000533184 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
SHARPIN-207ENST00000533184 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
SHARPIN-207ENST00000533184 ABCA10Q8WWZ4 1543 aa12.82□□□□□ -0.36
SHARPIN-207ENST00000533184 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
SHARPIN-207ENST00000533184 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
SHARPIN-207ENST00000533184 FBLN2P98095 1184 aa12.79□□□□□ -0.36
SHARPIN-207ENST00000533184 ABCA5Q8WWZ7 1642 aa12.77□□□□□ -0.36
SHARPIN-207ENST00000533184 SNAPC4Q5SXM2 1469 aa12.77□□□□□ -0.37
SHARPIN-207ENST00000533184 PBRM1Q86U86 1689 aa12.77□□□□□ -0.37
SHARPIN-207ENST00000533184 GRIN2BQ13224 1484 aa12.73□□□□□ -0.37
SHARPIN-207ENST00000533184 KIF27Q86VH2 1401 aa12.72□□□□□ -0.37
SHARPIN-207ENST00000533184 IGF1RP08069 1367 aa12.7□□□□□ -0.38
SHARPIN-207ENST00000533184 CHD1O14646 1710 aa12.69□□□□□ -0.38
SHARPIN-207ENST00000533184 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
SHARPIN-207ENST00000533184 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
SHARPIN-207ENST00000533184 MAGI1Q96QZ7 1491 aaPredicted RBP12.64□□□□□ -0.39
SHARPIN-207ENST00000533184 ERICH3Q5RHP9 1530 aa12.63□□□□□ -0.39
SHARPIN-207ENST00000533184 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
SHARPIN-207ENST00000533184 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
SHARPIN-207ENST00000533184 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
SHARPIN-207ENST00000533184 FHAD1B1AJZ9 1412 aa12.62□□□□□ -0.39
SHARPIN-207ENST00000533184 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
SHARPIN-207ENST00000533184 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
SHARPIN-207ENST00000533184 RANGAP1P46060 587 aaPredicted RBP12.58□□□□□ -0.4
SHARPIN-207ENST00000533184 CEP170Q5SW79 1584 aa12.58□□□□□ -0.4
SHARPIN-207ENST00000533184 RAPGEF2Q9Y4G8 1499 aa12.57□□□□□ -0.4
SHARPIN-207ENST00000533184 CUL7Q14999 1698 aa12.56□□□□□ -0.4
SHARPIN-207ENST00000533184 LOC105371045A0A1W2PR82 267 aa12.55□□□□□ -0.4
SHARPIN-207ENST00000533184 PRXQ9BXM0 1461 aa12.54□□□□□ -0.4
SHARPIN-207ENST00000533184 TTBK1Q5TCY1 1321 aaPredicted RBP12.51□□□□□ -0.41
SHARPIN-207ENST00000533184 EEA1Q15075 1411 aa12.51□□□□□ -0.41
SHARPIN-207ENST00000533184 NUP160Q12769 1436 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms