RNA–Protein interactions for RNA: ENST00000533164.5

DDX20-204, Transcript of DEAD-box helicase 20, humanhuman

TSL 5

Gene DDX20, Length 1,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX20-204ENST00000533164 NISCHQ9Y2I1 1504 aa53.68■■■■■ 6.18
DDX20-204ENST00000533164 CCDC180Q9P1Z9 1646 aa47.72■■■■■ 5.23
DDX20-204ENST00000533164 ABCC9O60706 1549 aa46.34■■■■■ 5.01
DDX20-204ENST00000533164 ZCCHC6Q5VYS8 1495 aaKnown RBP44.78■■■■■ 4.76
DDX20-204ENST00000533164 NACADO15069 1562 aa44.76■■■■■ 4.76
DDX20-204ENST00000533164 RB1CC1Q8TDY2 1594 aa44.74■■■■■ 4.75
DDX20-204ENST00000533164 MYO15BQ96JP2 1530 aa44.62■■■■■ 4.73
DDX20-204ENST00000533164 DCAF8L2P0C7V8 631 aa44.53■■■■■ 4.72
DDX20-204ENST00000533164 DCAF1Q9Y4B6 1507 aa44.49■■■■■ 4.71
DDX20-204ENST00000533164 UNC13AQ9UPW8 1703 aa43.85■■■■■ 4.61
DDX20-204ENST00000533164 BICRAQ9NZM4 1560 aa43.44■■■■■ 4.54
DDX20-204ENST00000533164 SCRIBQ14160 1630 aa43.44■■■■■ 4.54
DDX20-204ENST00000533164 PABPN1Q86U42 306 aaKnown RBP eCLIP43.26■■■■■ 4.52
DDX20-204ENST00000533164 SHROOM4Q9ULL8 1493 aa43.01■■■■■ 4.48
DDX20-204ENST00000533164 DNAJC5BQ9UF47 199 aa42.36■■■■■ 4.37
DDX20-204ENST00000533164 EIF4G1Q04637 1599 aaKnown RBP42.24■■■■■ 4.35
DDX20-204ENST00000533164 CC2D2AQ9P2K1 1620 aa42■■■■■ 4.31
DDX20-204ENST00000533164 CECR2Q9BXF3 1484 aa41.77■■■■■ 4.28
DDX20-204ENST00000533164 SMARCA4P51532 1647 aa41.63■■■■■ 4.25
DDX20-204ENST00000533164 BAZ1AQ9NRL2 1556 aaPredicted RBP41.59■■■■■ 4.25
DDX20-204ENST00000533164 MROH2BQ7Z745 1585 aa41.36■■■■■ 4.21
DDX20-204ENST00000533164 ATAD2BQ9ULI0 1458 aa41.32■■■■■ 4.21
DDX20-204ENST00000533164 SMARCA2P51531 1590 aa41.29■■■■■ 4.2
DDX20-204ENST00000533164 NCAPD3P42695 1498 aa41.29■■■■■ 4.2
DDX20-204ENST00000533164 PEG3Q9GZU2 1588 aa41.28■■■■■ 4.2
DDX20-204ENST00000533164 HMGXB3Q12766 1538 aa41.14■■■■■ 4.18
DDX20-204ENST00000533164 BAZ1BQ9UIG0 1483 aaKnown RBP40.95■■■■■ 4.15
DDX20-204ENST00000533164 WIZO95785 1651 aa40.95■■■■■ 4.15
DDX20-204ENST00000533164 RSF1Q96T23 1441 aaPredicted RBP40.94■■■■■ 4.15
DDX20-204ENST00000533164 TOP2AP11388 1531 aaKnown RBP40.51■■■■■ 4.08
DDX20-204ENST00000533164 NESP48681 1621 aa40.19■■■■■ 4.02
DDX20-204ENST00000533164 LAMC3Q9Y6N6 1575 aa40.19■■■■■ 4.02
DDX20-204ENST00000533164 CADPSQ9ULU8 1353 aa40.05■■■■■ 4
DDX20-204ENST00000533164 CCDC88BA6NC98 1476 aa40.01■■■■□ 3.99
DDX20-204ENST00000533164 CFTRP13569 1480 aa39.9■■■■□ 3.98
DDX20-204ENST00000533164 ERCC6Q03468 1493 aa39.89■■■■□ 3.98
DDX20-204ENST00000533164 SUPT5HO00267 1087 aaKnown RBP39.88■■■■□ 3.98
DDX20-204ENST00000533164 PDS5BQ9NTI5 1447 aa39.82■■■■□ 3.97
DDX20-204ENST00000533164 KIF21AQ7Z4S6 1674 aa39.8■■■■□ 3.96
DDX20-204ENST00000533164 PRDM2Q13029 1718 aa39.73■■■■□ 3.95
DDX20-204ENST00000533164 THOC2Q8NI27 1593 aaKnown RBP39.63■■■■□ 3.93
DDX20-204ENST00000533164 FANCD2Q9BXW9 1451 aa39.59■■■■□ 3.93
DDX20-204ENST00000533164 CEP164Q9UPV0 1460 aa39.52■■■■□ 3.92
DDX20-204ENST00000533164 CUX2O14529 1486 aa39.49■■■■□ 3.91
DDX20-204ENST00000533164 MRC2Q9UBG0 1479 aa39.43■■■■□ 3.9
DDX20-204ENST00000533164 WDR62O43379 1518 aa39.35■■■■□ 3.89
DDX20-204ENST00000533164 URB2Q14146 1524 aaKnown RBP39.21■■■■□ 3.87
DDX20-204ENST00000533164 ABCC8Q09428 1581 aa39.02■■■■□ 3.84
DDX20-204ENST00000533164 TOPBP1Q92547 1522 aa39■■■■□ 3.83
DDX20-204ENST00000533164 DNMBPQ6XZF7 1577 aa39■■■■□ 3.83
DDX20-204ENST00000533164 CUX1P39880 1505 aa38.79■■■■□ 3.8
DDX20-204ENST00000533164 POLA1P09884 1462 aaPredicted RBP38.69■■■■□ 3.78
DDX20-204ENST00000533164 IFT140Q96RY7 1462 aa38.69■■■■□ 3.78
DDX20-204ENST00000533164 TARBP1Q13395 1621 aaKnown RBP38.63■■■■□ 3.77
DDX20-204ENST00000533164 FGD5Q6ZNL6 1462 aa38.61■■■■□ 3.77
DDX20-204ENST00000533164 BIVM-ERCC5R4GMW8 1640 aa38.57■■■■□ 3.77
DDX20-204ENST00000533164 WRNQ14191 1432 aaPredicted RBP eCLIP38.57■■■■□ 3.77
DDX20-204ENST00000533164 TOP2BQ02880 1626 aa38.54■■■■□ 3.76
DDX20-204ENST00000533164 SYNJ1O43426 1573 aa38.52■■■■□ 3.76
DDX20-204ENST00000533164 ZNF608Q9ULD9 1512 aaPredicted RBP38.5■■■■□ 3.75
DDX20-204ENST00000533164 SOGA1O94964 1423 aa38.48■■■■□ 3.75
DDX20-204ENST00000533164 RAD54L2Q9Y4B4 1467 aa38.47■■■■□ 3.75
DDX20-204ENST00000533164 EIF4G3O43432 1585 aaKnown RBP38.41■■■■□ 3.74
DDX20-204ENST00000533164 WDR97A6NE52 1622 aa38.39■■■■□ 3.74
DDX20-204ENST00000533164 ABCA10Q8WWZ4 1543 aa38.27■■■■□ 3.72
DDX20-204ENST00000533164 AQRO60306 1485 aaKnown RBP eCLIP38.27■■■■□ 3.723e-6■■■■□ 22.4
DDX20-204ENST00000533164 TDRD9Q8NDG6 1382 aaKnown RBP38.22■■■■□ 3.71
DDX20-204ENST00000533164 ABCA5Q8WWZ7 1642 aa38.14■■■■□ 3.7
DDX20-204ENST00000533164 GAPVD1Q14C86 1478 aa38.06■■■■□ 3.68
DDX20-204ENST00000533164 PBRM1Q86U86 1689 aa38.06■■■■□ 3.68
DDX20-204ENST00000533164 GRIN2BQ13224 1484 aa38.03■■■■□ 3.68
DDX20-204ENST00000533164 DNAJC5Q9H3Z4 198 aa38■■■■□ 3.67
DDX20-204ENST00000533164 SNAPC4Q5SXM2 1469 aa37.95■■■■□ 3.67
DDX20-204ENST00000533164 MAGI1Q96QZ7 1491 aaPredicted RBP37.94■■■■□ 3.66
DDX20-204ENST00000533164 CHD1O14646 1710 aa37.91■■■■□ 3.66
DDX20-204ENST00000533164 ERICH3Q5RHP9 1530 aa37.83■■■■□ 3.65
DDX20-204ENST00000533164 OSCARQ8IYS5 282 aa37.8■■■■□ 3.64
DDX20-204ENST00000533164 SYNJ2O15056 1496 aa37.79■■■■□ 3.64
DDX20-204ENST00000533164 ADAMTS12P58397 1594 aa37.74■■■■□ 3.63
DDX20-204ENST00000533164 KIF27Q86VH2 1401 aa37.74■■■■□ 3.63
DDX20-204ENST00000533164 TRIM41Q8WV44 630 aa37.7■■■■□ 3.63
DDX20-204ENST00000533164 FBLN2P98095 1184 aa37.66■■■■□ 3.62
DDX20-204ENST00000533164 CHMP7Q8WUX9 453 aaPredicted RBP37.64■■■■□ 3.62
DDX20-204ENST00000533164 FHAD1B1AJZ9 1412 aa37.63■■■■□ 3.61
DDX20-204ENST00000533164 IGF1RP08069 1367 aa37.58■■■■□ 3.61
DDX20-204ENST00000533164 GRIN2AQ12879 1464 aa37.56■■■■□ 3.6
DDX20-204ENST00000533164 CUL7Q14999 1698 aa37.54■■■■□ 3.6
DDX20-204ENST00000533164 CLASP1Q7Z460 1538 aa37.49■■■■□ 3.59
DDX20-204ENST00000533164 RUSC2Q8N2Y8 1516 aa37.49■■■■□ 3.59
DDX20-204ENST00000533164 CHIC1Q5VXU3 224 aa37.42■■■■□ 3.58
DDX20-204ENST00000533164 NUP160Q12769 1436 aa37.41■■■■□ 3.58
DDX20-204ENST00000533164 CEP170Q5SW79 1584 aa37.4■■■■□ 3.58
DDX20-204ENST00000533164 CARMIL1Q5VZK9 1371 aa37.33■■■■□ 3.57
DDX20-204ENST00000533164 RIMBP3CA6NJZ7 1639 aa37.28■■■■□ 3.56
DDX20-204ENST00000533164 RIMBP3BA6NNM3 1639 aa37.28■■■■□ 3.56
DDX20-204ENST00000533164 RIMBP3Q9UFD9 1639 aa37.28■■■■□ 3.56
DDX20-204ENST00000533164 ARHGEF11O15085 1522 aa37.27■■■■□ 3.56
DDX20-204ENST00000533164 EEA1Q15075 1411 aa37.17■■■■□ 3.54
DDX20-204ENST00000533164 SHROOM2Q13796 1616 aa37.17■■■■□ 3.54
DDX20-204ENST00000533164 RAPGEF2Q9Y4G8 1499 aa37.16■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms