RNA–Protein interactions for RNA: ENST00000533068.5

PSMA1-213, Transcript of proteasome subunit alpha 1, humanhuman

TSL 4

Gene PSMA1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-213ENST00000533068 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
PSMA1-213ENST00000533068 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
PSMA1-213ENST00000533068 ABCC9O60706 1549 aa28.92■■■□□ 2.22
PSMA1-213ENST00000533068 DCAF8L2P0C7V8 631 aa28.02■■■□□ 2.08
PSMA1-213ENST00000533068 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
PSMA1-213ENST00000533068 ZCCHC6Q5VYS8 1495 aaKnown RBP27.85■■■□□ 2.05
PSMA1-213ENST00000533068 NACADO15069 1562 aa27.83■■■□□ 2.05
PSMA1-213ENST00000533068 MYO15BQ96JP2 1530 aa27.66■■■□□ 2.02
PSMA1-213ENST00000533068 DCAF1Q9Y4B6 1507 aa27.61■■■□□ 2.01
PSMA1-213ENST00000533068 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
PSMA1-213ENST00000533068 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
PSMA1-213ENST00000533068 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
PSMA1-213ENST00000533068 BICRAQ9NZM4 1560 aa26.93■■□□□ 1.9
PSMA1-213ENST00000533068 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
PSMA1-213ENST00000533068 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
PSMA1-213ENST00000533068 EIF4G1Q04637 1599 aaKnown RBP26.27■■□□□ 1.8
PSMA1-213ENST00000533068 CC2D2AQ9P2K1 1620 aa26.13■■□□□ 1.77
PSMA1-213ENST00000533068 CECR2Q9BXF3 1484 aa26.01■■□□□ 1.75
PSMA1-213ENST00000533068 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
PSMA1-213ENST00000533068 SMARCA4P51532 1647 aa25.9■■□□□ 1.74
PSMA1-213ENST00000533068 MROH2BQ7Z745 1585 aa25.75■■□□□ 1.71
PSMA1-213ENST00000533068 SMARCA2P51531 1590 aa25.72■■□□□ 1.71
PSMA1-213ENST00000533068 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
PSMA1-213ENST00000533068 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
PSMA1-213ENST00000533068 PEG3Q9GZU2 1588 aa25.59■■□□□ 1.69
PSMA1-213ENST00000533068 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
PSMA1-213ENST00000533068 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
PSMA1-213ENST00000533068 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
PSMA1-213ENST00000533068 WIZO95785 1651 aa25.5■■□□□ 1.67
PSMA1-213ENST00000533068 TOP2AP11388 1531 aaKnown RBP25.23■■□□□ 1.63
PSMA1-213ENST00000533068 SUPT5HO00267 1087 aaKnown RBP25.11■■□□□ 1.61
PSMA1-213ENST00000533068 NESP48681 1621 aa25.04■■□□□ 1.6
PSMA1-213ENST00000533068 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
PSMA1-213ENST00000533068 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
PSMA1-213ENST00000533068 CADPSQ9ULU8 1353 aa24.95■■□□□ 1.59
PSMA1-213ENST00000533068 CCDC88BA6NC98 1476 aa24.94■■□□□ 1.58
PSMA1-213ENST00000533068 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
PSMA1-213ENST00000533068 CFTRP13569 1480 aa24.82■■□□□ 1.56
PSMA1-213ENST00000533068 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
PSMA1-213ENST00000533068 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
PSMA1-213ENST00000533068 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
PSMA1-213ENST00000533068 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
PSMA1-213ENST00000533068 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
PSMA1-213ENST00000533068 CUX2O14529 1486 aa24.58■■□□□ 1.52
PSMA1-213ENST00000533068 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.52
PSMA1-213ENST00000533068 WDR62O43379 1518 aa24.45■■□□□ 1.51
PSMA1-213ENST00000533068 URB2Q14146 1524 aaKnown RBP24.4■■□□□ 1.5
PSMA1-213ENST00000533068 ABCC8Q09428 1581 aa24.31■■□□□ 1.48
PSMA1-213ENST00000533068 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
PSMA1-213ENST00000533068 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
PSMA1-213ENST00000533068 CUX1P39880 1505 aa24.15■■□□□ 1.46
PSMA1-213ENST00000533068 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
PSMA1-213ENST00000533068 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
PSMA1-213ENST00000533068 WRNQ14191 1432 aaPredicted RBP eCLIP24.09■■□□□ 1.45
PSMA1-213ENST00000533068 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
PSMA1-213ENST00000533068 SOGA1O94964 1423 aa24.03■■□□□ 1.44
PSMA1-213ENST00000533068 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
PSMA1-213ENST00000533068 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
PSMA1-213ENST00000533068 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
PSMA1-213ENST00000533068 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
PSMA1-213ENST00000533068 ZNF608Q9ULD9 1512 aaPredicted RBP23.98■■□□□ 1.43
PSMA1-213ENST00000533068 BIVM-ERCC5R4GMW8 1640 aa23.97■■□□□ 1.43
PSMA1-213ENST00000533068 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
PSMA1-213ENST00000533068 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.429e-8■■■□□ 18.7
PSMA1-213ENST00000533068 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
PSMA1-213ENST00000533068 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
PSMA1-213ENST00000533068 WDR97A6NE52 1622 aa23.82■■□□□ 1.4
PSMA1-213ENST00000533068 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
PSMA1-213ENST00000533068 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
PSMA1-213ENST00000533068 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.39
PSMA1-213ENST00000533068 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
PSMA1-213ENST00000533068 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
PSMA1-213ENST00000533068 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
PSMA1-213ENST00000533068 FBLN2P98095 1184 aa23.68■■□□□ 1.38
PSMA1-213ENST00000533068 DNAJC5Q9H3Z4 198 aa23.64■■□□□ 1.37
PSMA1-213ENST00000533068 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
PSMA1-213ENST00000533068 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
PSMA1-213ENST00000533068 CHMP7Q8WUX9 453 aaPredicted RBP23.6■■□□□ 1.37
PSMA1-213ENST00000533068 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
PSMA1-213ENST00000533068 CHD1O14646 1710 aa23.58■■□□□ 1.37
PSMA1-213ENST00000533068 ERICH3Q5RHP9 1530 aa23.55■■□□□ 1.36
PSMA1-213ENST00000533068 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
PSMA1-213ENST00000533068 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
PSMA1-213ENST00000533068 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
PSMA1-213ENST00000533068 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
PSMA1-213ENST00000533068 IGF1RP08069 1367 aa23.42■■□□□ 1.34
PSMA1-213ENST00000533068 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
PSMA1-213ENST00000533068 CUL7Q14999 1698 aa23.38■■□□□ 1.33
PSMA1-213ENST00000533068 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
PSMA1-213ENST00000533068 CARMIL1Q5VZK9 1371 aa23.34■■□□□ 1.33
PSMA1-213ENST00000533068 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
PSMA1-213ENST00000533068 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
PSMA1-213ENST00000533068 NUP160Q12769 1436 aa23.26■■□□□ 1.31
PSMA1-213ENST00000533068 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
PSMA1-213ENST00000533068 EEA1Q15075 1411 aa23.23■■□□□ 1.31
PSMA1-213ENST00000533068 RAPGEF2Q9Y4G8 1499 aa23.21■■□□□ 1.31
PSMA1-213ENST00000533068 ARHGEF11O15085 1522 aa23.2■■□□□ 1.3
PSMA1-213ENST00000533068 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
PSMA1-213ENST00000533068 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
PSMA1-213ENST00000533068 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms