RNA–Protein interactions for RNA: ENST00000532931.5

ATM-219, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-219ENST00000532931 NISCHQ9Y2I1 1504 aa29.83■■■□□ 2.37
ATM-219ENST00000532931 AEBP2Q6ZN18 517 aaPredicted RBP28.7■■■□□ 2.18
ATM-219ENST00000532931 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
ATM-219ENST00000532931 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
ATM-219ENST00000532931 ABCC9O60706 1549 aa25.44■■□□□ 1.66
ATM-219ENST00000532931 ZCCHC6Q5VYS8 1495 aaKnown RBP24.91■■□□□ 1.58
ATM-219ENST00000532931 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
ATM-219ENST00000532931 NACADO15069 1562 aa24.79■■□□□ 1.56
ATM-219ENST00000532931 DCAF1Q9Y4B6 1507 aa24.78■■□□□ 1.56
ATM-219ENST00000532931 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
ATM-219ENST00000532931 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
ATM-219ENST00000532931 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
ATM-219ENST00000532931 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
ATM-219ENST00000532931 DNAJC5BQ9UF47 199 aa24.22■■□□□ 1.47
ATM-219ENST00000532931 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
ATM-219ENST00000532931 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
ATM-219ENST00000532931 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
ATM-219ENST00000532931 SHROOM4Q9ULL8 1493 aa23.79■■□□□ 1.4
ATM-219ENST00000532931 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
ATM-219ENST00000532931 EIF4G1Q04637 1599 aaKnown RBP23.29■■□□□ 1.32
ATM-219ENST00000532931 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
ATM-219ENST00000532931 CC2D2AQ9P2K1 1620 aa23.12■■□□□ 1.29
ATM-219ENST00000532931 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
ATM-219ENST00000532931 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
ATM-219ENST00000532931 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
ATM-219ENST00000532931 PEG3Q9GZU2 1588 aa22.94■■□□□ 1.26
ATM-219ENST00000532931 SMARCA2P51531 1590 aa22.89■■□□□ 1.25
ATM-219ENST00000532931 ATAD2BQ9ULI0 1458 aa22.86■■□□□ 1.25
ATM-219ENST00000532931 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
ATM-219ENST00000532931 FOXD1Q16676 465 aa22.81■■□□□ 1.24
ATM-219ENST00000532931 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
ATM-219ENST00000532931 HMGXB3Q12766 1538 aa22.78■■□□□ 1.24
ATM-219ENST00000532931 WIZO95785 1651 aa22.77■■□□□ 1.24
ATM-219ENST00000532931 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
ATM-219ENST00000532931 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
ATM-219ENST00000532931 DNAJC5Q9H3Z4 198 aa22.42■■□□□ 1.18
ATM-219ENST00000532931 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
ATM-219ENST00000532931 CCDC88BA6NC98 1476 aa22.23■■□□□ 1.15
ATM-219ENST00000532931 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
ATM-219ENST00000532931 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
ATM-219ENST00000532931 PRDM2Q13029 1718 aa22.13■■□□□ 1.13
ATM-219ENST00000532931 NESP48681 1621 aa22.13■■□□□ 1.13
ATM-219ENST00000532931 CFTRP13569 1480 aa22.1■■□□□ 1.13
ATM-219ENST00000532931 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
ATM-219ENST00000532931 CUX2O14529 1486 aa21.98■■□□□ 1.11
ATM-219ENST00000532931 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
ATM-219ENST00000532931 ERCC6Q03468 1493 aa21.97■■□□□ 1.11
ATM-219ENST00000532931 FANCD2Q9BXW9 1451 aa21.87■■□□□ 1.09
ATM-219ENST00000532931 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
ATM-219ENST00000532931 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
ATM-219ENST00000532931 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
ATM-219ENST00000532931 MRC2Q9UBG0 1479 aa21.74■■□□□ 1.07
ATM-219ENST00000532931 WDR62O43379 1518 aa21.71■■□□□ 1.07
ATM-219ENST00000532931 URB2Q14146 1524 aaKnown RBP21.66■■□□□ 1.06
ATM-219ENST00000532931 ABCC8Q09428 1581 aa21.64■■□□□ 1.05
ATM-219ENST00000532931 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
ATM-219ENST00000532931 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
ATM-219ENST00000532931 CUX1P39880 1505 aa21.54■■□□□ 1.04
ATM-219ENST00000532931 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
ATM-219ENST00000532931 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
ATM-219ENST00000532931 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
ATM-219ENST00000532931 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
ATM-219ENST00000532931 POLA1P09884 1462 aaPredicted RBP21.41■■□□□ 1.02
ATM-219ENST00000532931 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
ATM-219ENST00000532931 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.01
ATM-219ENST00000532931 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
ATM-219ENST00000532931 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
ATM-219ENST00000532931 IFT140Q96RY7 1462 aa21.36■■□□□ 1.01
ATM-219ENST00000532931 MSH5O43196 834 aa21.35■■□□□ 1.01
ATM-219ENST00000532931 WDR97A6NE52 1622 aa21.33■■□□□ 1.01
ATM-219ENST00000532931 PIAS4Q8N2W9 510 aaPredicted RBP21.32■■□□□ 1
ATM-219ENST00000532931 SOGA1O94964 1423 aa21.29■■□□□ 1
ATM-219ENST00000532931 ADRA2BP18089 450 aa21.28■■□□□ 1
ATM-219ENST00000532931 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
ATM-219ENST00000532931 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
ATM-219ENST00000532931 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
ATM-219ENST00000532931 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
ATM-219ENST00000532931 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
ATM-219ENST00000532931 PBRM1Q86U86 1689 aa21.12■□□□□ 0.97
ATM-219ENST00000532931 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.97
ATM-219ENST00000532931 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
ATM-219ENST00000532931 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
ATM-219ENST00000532931 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
ATM-219ENST00000532931 GRIN2BQ13224 1484 aa21.03■□□□□ 0.96
ATM-219ENST00000532931 ERICH3Q5RHP9 1530 aa21.01■□□□□ 0.95
ATM-219ENST00000532931 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
ATM-219ENST00000532931 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
ATM-219ENST00000532931 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
ATM-219ENST00000532931 CHD1O14646 1710 aa20.93■□□□□ 0.94
ATM-219ENST00000532931 CUL7Q14999 1698 aa20.9■□□□□ 0.94
ATM-219ENST00000532931 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
ATM-219ENST00000532931 RUSC2Q8N2Y8 1516 aa20.88■□□□□ 0.93
ATM-219ENST00000532931 IGF1RP08069 1367 aa20.88■□□□□ 0.93
ATM-219ENST00000532931 SYNJ2O15056 1496 aa20.88■□□□□ 0.93
ATM-219ENST00000532931 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
ATM-219ENST00000532931 EEA1Q15075 1411 aa20.82■□□□□ 0.92
ATM-219ENST00000532931 GRIN2AQ12879 1464 aa20.77■□□□□ 0.92
ATM-219ENST00000532931 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
ATM-219ENST00000532931 CHMP7Q8WUX9 453 aaPredicted RBP20.74■□□□□ 0.91
ATM-219ENST00000532931 POTEDQ86YR6 584 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms