RNA–Protein interactions for RNA: ENST00000532784.5

POLD3-209, Transcript of DNA polymerase delta 3, accessory subunit, humanhuman

TSL 4

Gene POLD3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD3-209ENST00000532784 NISCHQ9Y2I1 1504 aa37.44■■■■□ 3.58
POLD3-209ENST00000532784 CCDC180Q9P1Z9 1646 aa33.32■■■□□ 2.92
POLD3-209ENST00000532784 ABCC9O60706 1549 aa32.43■■■□□ 2.78
POLD3-209ENST00000532784 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
POLD3-209ENST00000532784 NACADO15069 1562 aa31.3■■■□□ 2.6
POLD3-209ENST00000532784 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
POLD3-209ENST00000532784 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
POLD3-209ENST00000532784 MYO15BQ96JP2 1530 aa31.14■■■□□ 2.58
POLD3-209ENST00000532784 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
POLD3-209ENST00000532784 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
POLD3-209ENST00000532784 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
POLD3-209ENST00000532784 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.44
POLD3-209ENST00000532784 BICRAQ9NZM4 1560 aa30.27■■■□□ 2.44
POLD3-209ENST00000532784 SHROOM4Q9ULL8 1493 aa30.11■■■□□ 2.41
POLD3-209ENST00000532784 DNAJC5BQ9UF47 199 aa29.59■■■□□ 2.33
POLD3-209ENST00000532784 EIF4G1Q04637 1599 aaKnown RBP29.51■■■□□ 2.31
POLD3-209ENST00000532784 CC2D2AQ9P2K1 1620 aa29.36■■■□□ 2.29
POLD3-209ENST00000532784 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
POLD3-209ENST00000532784 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
POLD3-209ENST00000532784 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
POLD3-209ENST00000532784 SMARCA2P51531 1590 aa28.89■■■□□ 2.22
POLD3-209ENST00000532784 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
POLD3-209ENST00000532784 NCAPD3P42695 1498 aa28.84■■■□□ 2.21
POLD3-209ENST00000532784 MROH2BQ7Z745 1585 aa28.82■■■□□ 2.2
POLD3-209ENST00000532784 PEG3Q9GZU2 1588 aa28.78■■■□□ 2.2
POLD3-209ENST00000532784 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
POLD3-209ENST00000532784 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
POLD3-209ENST00000532784 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
POLD3-209ENST00000532784 WIZO95785 1651 aa28.52■■■□□ 2.16
POLD3-209ENST00000532784 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
POLD3-209ENST00000532784 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
POLD3-209ENST00000532784 NESP48681 1621 aa28.06■■■□□ 2.08
POLD3-209ENST00000532784 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
POLD3-209ENST00000532784 CADPSQ9ULU8 1353 aa28■■■□□ 2.07
POLD3-209ENST00000532784 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
POLD3-209ENST00000532784 CCDC88BA6NC98 1476 aa27.9■■■□□ 2.06
POLD3-209ENST00000532784 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
POLD3-209ENST00000532784 CFTRP13569 1480 aa27.85■■■□□ 2.05
POLD3-209ENST00000532784 KIF21AQ7Z4S6 1674 aa27.79■■■□□ 2.04
POLD3-209ENST00000532784 PRDM2Q13029 1718 aa27.71■■■□□ 2.03
POLD3-209ENST00000532784 CUX2O14529 1486 aa27.7■■■□□ 2.03
POLD3-209ENST00000532784 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.02
POLD3-209ENST00000532784 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
POLD3-209ENST00000532784 THOC2Q8NI27 1593 aaKnown RBP27.67■■■□□ 2.02
POLD3-209ENST00000532784 MRC2Q9UBG0 1479 aa27.61■■■□□ 2.01
POLD3-209ENST00000532784 WDR62O43379 1518 aa27.5■■□□□ 1.99
POLD3-209ENST00000532784 URB2Q14146 1524 aaKnown RBP27.37■■□□□ 1.97
POLD3-209ENST00000532784 ABCC8Q09428 1581 aa27.33■■□□□ 1.97
POLD3-209ENST00000532784 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
POLD3-209ENST00000532784 TOPBP1Q92547 1522 aa27.25■■□□□ 1.95
POLD3-209ENST00000532784 IFT140Q96RY7 1462 aa27.1■■□□□ 1.93
POLD3-209ENST00000532784 CUX1P39880 1505 aa27.04■■□□□ 1.92
POLD3-209ENST00000532784 POLA1P09884 1462 aaPredicted RBP27.01■■□□□ 1.91
POLD3-209ENST00000532784 FGD5Q6ZNL6 1462 aa26.96■■□□□ 1.91
POLD3-209ENST00000532784 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
POLD3-209ENST00000532784 TARBP1Q13395 1621 aaKnown RBP26.94■■□□□ 1.9
POLD3-209ENST00000532784 SOGA1O94964 1423 aa26.92■■□□□ 1.9
POLD3-209ENST00000532784 TOP2BQ02880 1626 aa26.88■■□□□ 1.89
POLD3-209ENST00000532784 BIVM-ERCC5R4GMW8 1640 aa26.88■■□□□ 1.89
POLD3-209ENST00000532784 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
POLD3-209ENST00000532784 RAD54L2Q9Y4B4 1467 aa26.86■■□□□ 1.89
POLD3-209ENST00000532784 SYNJ1O43426 1573 aa26.84■■□□□ 1.89
POLD3-209ENST00000532784 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
POLD3-209ENST00000532784 WDR97A6NE52 1622 aa26.83■■□□□ 1.88
POLD3-209ENST00000532784 AQRO60306 1485 aaKnown RBP eCLIP26.75■■□□□ 1.87
POLD3-209ENST00000532784 ABCA10Q8WWZ4 1543 aa26.73■■□□□ 1.87
POLD3-209ENST00000532784 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
POLD3-209ENST00000532784 DNAJC5Q9H3Z4 198 aa26.68■■□□□ 1.86
POLD3-209ENST00000532784 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
POLD3-209ENST00000532784 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
POLD3-209ENST00000532784 ABCA5Q8WWZ7 1642 aa26.61■■□□□ 1.85
POLD3-209ENST00000532784 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
POLD3-209ENST00000532784 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
POLD3-209ENST00000532784 OSCARQ8IYS5 282 aa26.55■■□□□ 1.84
POLD3-209ENST00000532784 SNAPC4Q5SXM2 1469 aa26.54■■□□□ 1.84
POLD3-209ENST00000532784 CHD1O14646 1710 aa26.48■■□□□ 1.83
POLD3-209ENST00000532784 FBLN2P98095 1184 aa26.47■■□□□ 1.83
POLD3-209ENST00000532784 SYNJ2O15056 1496 aa26.43■■□□□ 1.82
POLD3-209ENST00000532784 CHMP7Q8WUX9 453 aaPredicted RBP26.43■■□□□ 1.82
POLD3-209ENST00000532784 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
POLD3-209ENST00000532784 KIF27Q86VH2 1401 aa26.4■■□□□ 1.82
POLD3-209ENST00000532784 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
POLD3-209ENST00000532784 ADAMTS12P58397 1594 aa26.35■■□□□ 1.81
POLD3-209ENST00000532784 FHAD1B1AJZ9 1412 aa26.33■■□□□ 1.81
POLD3-209ENST00000532784 GRIN2AQ12879 1464 aa26.26■■□□□ 1.79
POLD3-209ENST00000532784 CUL7Q14999 1698 aa26.24■■□□□ 1.79
POLD3-209ENST00000532784 IGF1RP08069 1367 aa26.21■■□□□ 1.79
POLD3-209ENST00000532784 CLASP1Q7Z460 1538 aa26.19■■□□□ 1.78
POLD3-209ENST00000532784 NUP160Q12769 1436 aa26.13■■□□□ 1.77
POLD3-209ENST00000532784 CEP170Q5SW79 1584 aa26.1■■□□□ 1.77
POLD3-209ENST00000532784 ARHGEF11O15085 1522 aa26.09■■□□□ 1.77
POLD3-209ENST00000532784 CARMIL1Q5VZK9 1371 aa26.09■■□□□ 1.77
POLD3-209ENST00000532784 RIMBP3CA6NJZ7 1639 aa26.09■■□□□ 1.77
POLD3-209ENST00000532784 RIMBP3BA6NNM3 1639 aa26.09■■□□□ 1.77
POLD3-209ENST00000532784 RIMBP3Q9UFD9 1639 aa26.09■■□□□ 1.77
POLD3-209ENST00000532784 RUSC2Q8N2Y8 1516 aa26.06■■□□□ 1.76
POLD3-209ENST00000532784 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
POLD3-209ENST00000532784 EEA1Q15075 1411 aa25.99■■□□□ 1.75
POLD3-209ENST00000532784 RAPGEF2Q9Y4G8 1499 aa25.98■■□□□ 1.75
POLD3-209ENST00000532784 SHROOM2Q13796 1616 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms