RNA–Protein interactions for RNA: ENST00000532497.5

POLD3-208, Transcript of DNA polymerase delta 3, accessory subunit, humanhuman

TSL 1 (best) BASIC

Gene POLD3, Length 1,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD3-208ENST00000532497 NISCHQ9Y2I1 1504 aa35.84■■■■□ 3.33
POLD3-208ENST00000532497 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
POLD3-208ENST00000532497 ABCC9O60706 1549 aa30.3■■■□□ 2.44
POLD3-208ENST00000532497 ZCCHC6Q5VYS8 1495 aaKnown RBP30.01■■■□□ 2.39
POLD3-208ENST00000532497 DCAF1Q9Y4B6 1507 aa29.7■■■□□ 2.34
POLD3-208ENST00000532497 DCAF8L2P0C7V8 631 aa29.61■■■□□ 2.33
POLD3-208ENST00000532497 MYO15BQ96JP2 1530 aa29.59■■■□□ 2.33
POLD3-208ENST00000532497 NACADO15069 1562 aa29.56■■■□□ 2.32
POLD3-208ENST00000532497 RB1CC1Q8TDY2 1594 aa29.46■■■□□ 2.31
POLD3-208ENST00000532497 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
POLD3-208ENST00000532497 UNC13AQ9UPW8 1703 aa28.87■■■□□ 2.21
POLD3-208ENST00000532497 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
POLD3-208ENST00000532497 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
POLD3-208ENST00000532497 PABPN1Q86U42 306 aaKnown RBP eCLIP28.38■■■□□ 2.13
POLD3-208ENST00000532497 CECR2Q9BXF3 1484 aa27.84■■■□□ 2.05
POLD3-208ENST00000532497 BAZ1AQ9NRL2 1556 aaPredicted RBP27.76■■■□□ 2.03
POLD3-208ENST00000532497 EIF4G1Q04637 1599 aaKnown RBP27.75■■■□□ 2.03
POLD3-208ENST00000532497 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
POLD3-208ENST00000532497 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.01
POLD3-208ENST00000532497 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
POLD3-208ENST00000532497 CC2D2AQ9P2K1 1620 aa27.48■■□□□ 1.99
POLD3-208ENST00000532497 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
POLD3-208ENST00000532497 WIZO95785 1651 aa27.41■■□□□ 1.98
POLD3-208ENST00000532497 SMARCA2P51531 1590 aa27.39■■□□□ 1.97
POLD3-208ENST00000532497 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
POLD3-208ENST00000532497 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
POLD3-208ENST00000532497 NCAPD3P42695 1498 aa27.24■■□□□ 1.95
POLD3-208ENST00000532497 HMGXB3Q12766 1538 aa27.22■■□□□ 1.95
POLD3-208ENST00000532497 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
POLD3-208ENST00000532497 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
POLD3-208ENST00000532497 TOP2AP11388 1531 aaKnown RBP27.14■■□□□ 1.94
POLD3-208ENST00000532497 CCDC88BA6NC98 1476 aa26.78■■□□□ 1.88
POLD3-208ENST00000532497 LAMC3Q9Y6N6 1575 aa26.47■■□□□ 1.83
POLD3-208ENST00000532497 CADPSQ9ULU8 1353 aa26.47■■□□□ 1.83
POLD3-208ENST00000532497 CFTRP13569 1480 aa26.46■■□□□ 1.83
POLD3-208ENST00000532497 PRDM2Q13029 1718 aa26.43■■□□□ 1.82
POLD3-208ENST00000532497 NESP48681 1621 aa26.42■■□□□ 1.82
POLD3-208ENST00000532497 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
POLD3-208ENST00000532497 FANCD2Q9BXW9 1451 aa26.2■■□□□ 1.78
POLD3-208ENST00000532497 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
POLD3-208ENST00000532497 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
POLD3-208ENST00000532497 ERCC6Q03468 1493 aa26.08■■□□□ 1.77
POLD3-208ENST00000532497 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
POLD3-208ENST00000532497 WRNQ14191 1432 aaPredicted RBP eCLIP25.94■■□□□ 1.74
POLD3-208ENST00000532497 MRC2Q9UBG0 1479 aa25.94■■□□□ 1.74
POLD3-208ENST00000532497 THOC2Q8NI27 1593 aaKnown RBP25.94■■□□□ 1.74
POLD3-208ENST00000532497 CUX1P39880 1505 aa25.9■■□□□ 1.74
POLD3-208ENST00000532497 URB2Q14146 1524 aaKnown RBP25.9■■□□□ 1.74
POLD3-208ENST00000532497 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
POLD3-208ENST00000532497 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
POLD3-208ENST00000532497 BIVM-ERCC5R4GMW8 1640 aa25.87■■□□□ 1.73
POLD3-208ENST00000532497 WDR62O43379 1518 aa25.86■■□□□ 1.73
POLD3-208ENST00000532497 TOP2BQ02880 1626 aa25.86■■□□□ 1.73
POLD3-208ENST00000532497 TOPBP1Q92547 1522 aa25.86■■□□□ 1.73
POLD3-208ENST00000532497 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
POLD3-208ENST00000532497 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
POLD3-208ENST00000532497 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
POLD3-208ENST00000532497 POLA1P09884 1462 aaPredicted RBP25.68■■□□□ 1.7
POLD3-208ENST00000532497 CUX2O14529 1486 aa25.59■■□□□ 1.69
POLD3-208ENST00000532497 SOGA1O94964 1423 aa25.55■■□□□ 1.68
POLD3-208ENST00000532497 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
POLD3-208ENST00000532497 RAD54L2Q9Y4B4 1467 aa25.54■■□□□ 1.68
POLD3-208ENST00000532497 WDR97A6NE52 1622 aa25.53■■□□□ 1.68
POLD3-208ENST00000532497 IFT140Q96RY7 1462 aa25.52■■□□□ 1.68
POLD3-208ENST00000532497 ABCA10Q8WWZ4 1543 aa25.48■■□□□ 1.67
POLD3-208ENST00000532497 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
POLD3-208ENST00000532497 ZNF608Q9ULD9 1512 aaPredicted RBP25.36■■□□□ 1.65
POLD3-208ENST00000532497 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
POLD3-208ENST00000532497 KIF27Q86VH2 1401 aa25.34■■□□□ 1.65
POLD3-208ENST00000532497 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
POLD3-208ENST00000532497 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
POLD3-208ENST00000532497 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
POLD3-208ENST00000532497 EEA1Q15075 1411 aa25.28■■□□□ 1.64
POLD3-208ENST00000532497 PBRM1Q86U86 1689 aa25.28■■□□□ 1.64
POLD3-208ENST00000532497 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.64
POLD3-208ENST00000532497 ERICH3Q5RHP9 1530 aa25.21■■□□□ 1.63
POLD3-208ENST00000532497 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
POLD3-208ENST00000532497 FAM9AQ8IZU1 332 aaPredicted RBP25.16■■□□□ 1.62
POLD3-208ENST00000532497 IGF1RP08069 1367 aa25.13■■□□□ 1.61
POLD3-208ENST00000532497 CUL7Q14999 1698 aa25.13■■□□□ 1.61
POLD3-208ENST00000532497 CSRNP3Q8WYN3 585 aa25.1■■□□□ 1.61
POLD3-208ENST00000532497 SNAPC4Q5SXM2 1469 aa25.1■■□□□ 1.61
POLD3-208ENST00000532497 ADAMTS12P58397 1594 aa25.08■■□□□ 1.61
POLD3-208ENST00000532497 MAGI1Q96QZ7 1491 aaPredicted RBP25.08■■□□□ 1.6
POLD3-208ENST00000532497 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
POLD3-208ENST00000532497 KIF21BO75037 1637 aa25.02■■□□□ 1.6
POLD3-208ENST00000532497 CARMIL1Q5VZK9 1371 aa25.01■■□□□ 1.59
POLD3-208ENST00000532497 FHAD1B1AJZ9 1412 aa25■■□□□ 1.59
POLD3-208ENST00000532497 SYNJ2O15056 1496 aa24.97■■□□□ 1.59
POLD3-208ENST00000532497 RAPGEF2Q9Y4G8 1499 aa24.96■■□□□ 1.59
POLD3-208ENST00000532497 CHD1O14646 1710 aa24.92■■□□□ 1.58
POLD3-208ENST00000532497 GRIN2AQ12879 1464 aa24.89■■□□□ 1.58
POLD3-208ENST00000532497 GOLGA3Q08378 1498 aa24.89■■□□□ 1.57
POLD3-208ENST00000532497 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
POLD3-208ENST00000532497 FBLN2P98095 1184 aa24.82■■□□□ 1.56
POLD3-208ENST00000532497 EHMT2Q96KQ7 1210 aa24.79■■□□□ 1.56
POLD3-208ENST00000532497 CTTNBP2Q8WZ74 1663 aa24.78■■□□□ 1.56
POLD3-208ENST00000532497 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
POLD3-208ENST00000532497 NUP160Q12769 1436 aa24.74■■□□□ 1.55
POLD3-208ENST00000532497 LOC105371045A0A1W2PR82 267 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms