RNA–Protein interactions for RNA: ENST00000532337.1

SMG1P6-201, Transcript of SMG1 pseudogene 6, humanhuman

BASIC

Gene SMG1P6, Length 2,930 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P6-201ENST00000532337 AEBP2Q6ZN18 517 aaPredicted RBP12.48□□□□□ -0.41
SMG1P6-201ENST00000532337 CHIC1Q5VXU3 224 aa11.86□□□□□ -0.51
SMG1P6-201ENST00000532337 NISCHQ9Y2I1 1504 aa11.49□□□□□ -0.57
SMG1P6-201ENST00000532337 SENP3Q9H4L4 574 aaPredicted RBP10.7□□□□□ -0.7
SMG1P6-201ENST00000532337 PHF23Q9BUL5 403 aaPredicted RBP10.52□□□□□ -0.73
SMG1P6-201ENST00000532337 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
SMG1P6-201ENST00000532337 CCDC180Q9P1Z9 1646 aa10.19□□□□□ -0.78
SMG1P6-201ENST00000532337 FOXD1Q16676 465 aa9.94□□□□□ -0.82
SMG1P6-201ENST00000532337 EHMT2Q96KQ7 1210 aa9.75□□□□□ -0.85
SMG1P6-201ENST00000532337 DCAF1Q9Y4B6 1507 aa9.66□□□□□ -0.86
SMG1P6-201ENST00000532337 ZCCHC6Q5VYS8 1495 aaKnown RBP9.65□□□□□ -0.87
SMG1P6-201ENST00000532337 MYO15BQ96JP2 1530 aa9.64□□□□□ -0.87
SMG1P6-201ENST00000532337 NACADO15069 1562 aa9.49□□□□□ -0.89
SMG1P6-201ENST00000532337 PLPPR3Q6T4P5 718 aa9.46□□□□□ -0.9
SMG1P6-201ENST00000532337 ABCC9O60706 1549 aa9.45□□□□□ -0.9
SMG1P6-201ENST00000532337 RB1CC1Q8TDY2 1594 aa9.38□□□□□ -0.91
SMG1P6-201ENST00000532337 RTN4Q9NQC3 1192 aaKnown RBP9.37□□□□□ -0.91
SMG1P6-201ENST00000532337 MSH5O43196 834 aa9.37□□□□□ -0.91
SMG1P6-201ENST00000532337 PIAS4Q8N2W9 510 aaPredicted RBP9.25□□□□□ -0.93
SMG1P6-201ENST00000532337 DAXXQ9UER7 740 aaPredicted RBP9.25□□□□□ -0.93
SMG1P6-201ENST00000532337 PPP6R1Q9UPN7 881 aa9.24□□□□□ -0.93
SMG1P6-201ENST00000532337 NCBP3Q53F19 620 aaKnown RBP9.21□□□□□ -0.93
SMG1P6-201ENST00000532337 ADRA2BP18089 450 aa9.19□□□□□ -0.94
SMG1P6-201ENST00000532337 AMER1Q5JTC6 1135 aaPredicted RBP9.18□□□□□ -0.94
SMG1P6-201ENST00000532337 SHROOM4Q9ULL8 1493 aa9.18□□□□□ -0.94
SMG1P6-201ENST00000532337 POTEDQ86YR6 584 aa9.15□□□□□ -0.94
SMG1P6-201ENST00000532337 UNC13AQ9UPW8 1703 aa9.15□□□□□ -0.94
SMG1P6-201ENST00000532337 DCAF8L2P0C7V8 631 aa9.13□□□□□ -0.95
SMG1P6-201ENST00000532337 CSRNP3Q8WYN3 585 aa9.13□□□□□ -0.95
SMG1P6-201ENST00000532337 KCNA4P22459 653 aa9.11□□□□□ -0.95
SMG1P6-201ENST00000532337 SCRIBQ14160 1630 aa9.1□□□□□ -0.95
SMG1P6-201ENST00000532337 BICRAQ9NZM4 1560 aa9.09□□□□□ -0.95
SMG1P6-201ENST00000532337 PRKCSHP14314 528 aaPredicted RBP8.92□□□□□ -0.98
SMG1P6-201ENST00000532337 BAZ1AQ9NRL2 1556 aaPredicted RBP8.89□□□□□ -0.99
SMG1P6-201ENST00000532337 PEG3Q9GZU2 1588 aa8.87□□□□□ -0.99
SMG1P6-201ENST00000532337 SMARCA4P51532 1647 aa8.84□□□□□ -0.99
SMG1P6-201ENST00000532337 CECR2Q9BXF3 1484 aa8.82□□□□□ -1
SMG1P6-201ENST00000532337 PABPN1Q86U42 306 aaKnown RBP eCLIP8.81□□□□□ -1
SMG1P6-201ENST00000532337 RSF1Q96T23 1441 aaPredicted RBP8.81□□□□□ -1
SMG1P6-201ENST00000532337 EIF4G1Q04637 1599 aaKnown RBP8.79□□□□□ -1
SMG1P6-201ENST00000532337 MROH2BQ7Z745 1585 aa8.79□□□□□ -1
SMG1P6-201ENST00000532337 ARXQ96QS3 562 aa8.79□□□□□ -1
SMG1P6-201ENST00000532337 SMARCA2P51531 1590 aa8.76□□□□□ -1.01
SMG1P6-201ENST00000532337 NCAPD3P42695 1498 aa8.74□□□□□ -1.01
SMG1P6-201ENST00000532337 HMGXB3Q12766 1538 aa8.74□□□□□ -1.01
SMG1P6-201ENST00000532337 ATAD2BQ9ULI0 1458 aa8.72□□□□□ -1.01
SMG1P6-201ENST00000532337 TIMELESSQ9UNS1 1208 aa8.72□□□□□ -1.01
SMG1P6-201ENST00000532337 TOP2AP11388 1531 aaKnown RBP8.7□□□□□ -1.02
SMG1P6-201ENST00000532337 WIZO95785 1651 aa8.69□□□□□ -1.02
SMG1P6-201ENST00000532337 SLC4A1APQ9BWU0 796 aaKnown RBP8.68□□□□□ -1.02
SMG1P6-201ENST00000532337 TAOK2Q9UL54 1235 aa8.67□□□□□ -1.02
SMG1P6-201ENST00000532337 CC2D2AQ9P2K1 1620 aa8.67□□□□□ -1.02
SMG1P6-201ENST00000532337 APLP2Q06481 763 aa8.64□□□□□ -1.03
SMG1P6-201ENST00000532337 BAZ1BQ9UIG0 1483 aaKnown RBP8.62□□□□□ -1.03
SMG1P6-201ENST00000532337 TTBK1Q5TCY1 1321 aaPredicted RBP8.61□□□□□ -1.03
SMG1P6-201ENST00000532337 TULP1O00294 542 aaPredicted RBP8.59□□□□□ -1.03
SMG1P6-201ENST00000532337 BCANQ96GW7 911 aa8.57□□□□□ -1.04
SMG1P6-201ENST00000532337 PELP1Q8IZL8 1130 aaKnown RBP8.55□□□□□ -1.04
SMG1P6-201ENST00000532337 CCDC88BA6NC98 1476 aa8.54□□□□□ -1.04
SMG1P6-201ENST00000532337 SUPT5HO00267 1087 aaKnown RBP8.53□□□□□ -1.04
SMG1P6-201ENST00000532337 TPRNQ4KMQ1 711 aa8.5□□□□□ -1.05
SMG1P6-201ENST00000532337 HOMEZQ8IX15 550 aa8.5□□□□□ -1.05
SMG1P6-201ENST00000532337 SCAF1Q9H7N4 1312 aaKnown RBP8.49□□□□□ -1.05
SMG1P6-201ENST00000532337 DMRT2Q9Y5R5 561 aa8.49□□□□□ -1.05
SMG1P6-201ENST00000532337 CFTRP13569 1480 aa8.48□□□□□ -1.05
SMG1P6-201ENST00000532337 PRDM2Q13029 1718 aa8.48□□□□□ -1.05
SMG1P6-201ENST00000532337 RANGAP1P46060 587 aaPredicted RBP8.47□□□□□ -1.05
SMG1P6-201ENST00000532337 ERICH6Q7L0X2 663 aa8.47□□□□□ -1.05
SMG1P6-201ENST00000532337 PLCB2Q00722 1185 aa8.46□□□□□ -1.06
SMG1P6-201ENST00000532337 MYT1Q01538 1121 aa8.46□□□□□ -1.06
SMG1P6-201ENST00000532337 LAMC3Q9Y6N6 1575 aa8.45□□□□□ -1.06
SMG1P6-201ENST00000532337 MAPK8IP2Q13387 824 aaPredicted RBP8.45□□□□□ -1.06
SMG1P6-201ENST00000532337 DNAJC5BQ9UF47 199 aa8.44□□□□□ -1.06
SMG1P6-201ENST00000532337 CADPSQ9ULU8 1353 aa8.43□□□□□ -1.06
SMG1P6-201ENST00000532337 ZBTB22O15209 634 aa8.37□□□□□ -1.07
SMG1P6-201ENST00000532337 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
SMG1P6-201ENST00000532337 HAP1P54257 671 aaPredicted RBP8.35□□□□□ -1.07
SMG1P6-201ENST00000532337 PDS5BQ9NTI5 1447 aa8.33□□□□□ -1.08
SMG1P6-201ENST00000532337 ABCC8Q09428 1581 aa8.32□□□□□ -1.08
SMG1P6-201ENST00000532337 BIVM-ERCC5R4GMW8 1640 aa8.32□□□□□ -1.08
SMG1P6-201ENST00000532337 PODXL2Q9NZ53 605 aa8.31□□□□□ -1.08
SMG1P6-201ENST00000532337 KLHL34Q8N239 644 aa8.3□□□□□ -1.08
SMG1P6-201ENST00000532337 FANCD2Q9BXW9 1451 aa8.3□□□□□ -1.08
SMG1P6-201ENST00000532337 TOP2BQ02880 1626 aa8.29□□□□□ -1.08
SMG1P6-201ENST00000532337 NESP48681 1621 aa8.28□□□□□ -1.08
SMG1P6-201ENST00000532337 CEP164Q9UPV0 1460 aa8.27□□□□□ -1.09
SMG1P6-201ENST00000532337 PPP4R3CPQ6ZMV5 832 aa8.27□□□□□ -1.09
SMG1P6-201ENST00000532337 WRNQ14191 1432 aaPredicted RBP eCLIP8.27□□□□□ -1.09
SMG1P6-201ENST00000532337 DNMBPQ6XZF7 1577 aa8.27□□□□□ -1.09
SMG1P6-201ENST00000532337 CUX1P39880 1505 aa8.25□□□□□ -1.09
SMG1P6-201ENST00000532337 KIF21AQ7Z4S6 1674 aa8.25□□□□□ -1.09
SMG1P6-201ENST00000532337 WDR62O43379 1518 aa8.24□□□□□ -1.09
SMG1P6-201ENST00000532337 SYNJ1O43426 1573 aa8.24□□□□□ -1.09
SMG1P6-201ENST00000532337 MRC2Q9UBG0 1479 aa8.23□□□□□ -1.09
SMG1P6-201ENST00000532337 WDR97A6NE52 1622 aa8.23□□□□□ -1.09
SMG1P6-201ENST00000532337 THOC2Q8NI27 1593 aaKnown RBP8.23□□□□□ -1.09
SMG1P6-201ENST00000532337 TOPBP1Q92547 1522 aa8.22□□□□□ -1.09
SMG1P6-201ENST00000532337 URB2Q14146 1524 aaKnown RBP8.21□□□□□ -1.09
SMG1P6-201ENST00000532337 EEA1Q15075 1411 aa8.2□□□□□ -1.1
SMG1P6-201ENST00000532337 VSIG10Q8N0Z9 540 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms