RNA–Protein interactions for RNA: ENST00000532266.5

FDFT1-221, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 5

Gene FDFT1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-221ENST00000532266 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
FDFT1-221ENST00000532266 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
FDFT1-221ENST00000532266 ABCC9O60706 1549 aa16.64■□□□□ 0.25
FDFT1-221ENST00000532266 DCAF8L2P0C7V8 631 aa16.58■□□□□ 0.24
FDFT1-221ENST00000532266 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
FDFT1-221ENST00000532266 DCAF1Q9Y4B6 1507 aa16.28■□□□□ 0.2
FDFT1-221ENST00000532266 SHROOM4Q9ULL8 1493 aa16.18■□□□□ 0.18
FDFT1-221ENST00000532266 NACADO15069 1562 aa16.16■□□□□ 0.18
FDFT1-221ENST00000532266 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
FDFT1-221ENST00000532266 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
FDFT1-221ENST00000532266 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
FDFT1-221ENST00000532266 UNC13AQ9UPW8 1703 aa15.76■□□□□ 0.11
FDFT1-221ENST00000532266 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
FDFT1-221ENST00000532266 BICRAQ9NZM4 1560 aa15.61■□□□□ 0.09
FDFT1-221ENST00000532266 AEBP2Q6ZN18 517 aaPredicted RBP15.55■□□□□ 0.08
FDFT1-221ENST00000532266 SUPT5HO00267 1087 aaKnown RBP15.47■□□□□ 0.07
FDFT1-221ENST00000532266 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
FDFT1-221ENST00000532266 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
FDFT1-221ENST00000532266 MROH2BQ7Z745 1585 aa15.32■□□□□ 0.04
FDFT1-221ENST00000532266 RSF1Q96T23 1441 aaPredicted RBP15.3■□□□□ 0.04
FDFT1-221ENST00000532266 BAZ1AQ9NRL2 1556 aaPredicted RBP15.28■□□□□ 0.04
FDFT1-221ENST00000532266 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
FDFT1-221ENST00000532266 WIZO95785 1651 aa15.19■□□□□ 0.02
FDFT1-221ENST00000532266 EIF4G1Q04637 1599 aaKnown RBP15.15■□□□□ 0.02
FDFT1-221ENST00000532266 ATAD2BQ9ULI0 1458 aa15.05■□□□□ -0
FDFT1-221ENST00000532266 SMARCA2P51531 1590 aa15□□□□□ -0.01
FDFT1-221ENST00000532266 PEG3Q9GZU2 1588 aa15□□□□□ -0.01
FDFT1-221ENST00000532266 CC2D2AQ9P2K1 1620 aa14.99□□□□□ -0.01
FDFT1-221ENST00000532266 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
FDFT1-221ENST00000532266 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
FDFT1-221ENST00000532266 NCAPD3P42695 1498 aa14.92□□□□□ -0.02
FDFT1-221ENST00000532266 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
FDFT1-221ENST00000532266 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
FDFT1-221ENST00000532266 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
FDFT1-221ENST00000532266 CADPSQ9ULU8 1353 aa14.56□□□□□ -0.08
FDFT1-221ENST00000532266 CFTRP13569 1480 aa14.54□□□□□ -0.08
FDFT1-221ENST00000532266 NESP48681 1621 aa14.54□□□□□ -0.08
FDFT1-221ENST00000532266 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
FDFT1-221ENST00000532266 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
FDFT1-221ENST00000532266 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
FDFT1-221ENST00000532266 LAMC3Q9Y6N6 1575 aa14.43□□□□□ -0.1
FDFT1-221ENST00000532266 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
FDFT1-221ENST00000532266 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
FDFT1-221ENST00000532266 SYNJ1O43426 1573 aa14.36□□□□□ -0.11
FDFT1-221ENST00000532266 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
FDFT1-221ENST00000532266 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
FDFT1-221ENST00000532266 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.12
FDFT1-221ENST00000532266 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.12
FDFT1-221ENST00000532266 CUX1P39880 1505 aa14.32□□□□□ -0.12
FDFT1-221ENST00000532266 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
FDFT1-221ENST00000532266 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
FDFT1-221ENST00000532266 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
FDFT1-221ENST00000532266 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
FDFT1-221ENST00000532266 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
FDFT1-221ENST00000532266 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
FDFT1-221ENST00000532266 SOGA1O94964 1423 aa14.22□□□□□ -0.13
FDFT1-221ENST00000532266 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
FDFT1-221ENST00000532266 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
FDFT1-221ENST00000532266 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
FDFT1-221ENST00000532266 EHMT2Q96KQ7 1210 aa14.19□□□□□ -0.14
FDFT1-221ENST00000532266 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
FDFT1-221ENST00000532266 RAD54L2Q9Y4B4 1467 aa14.15□□□□□ -0.14
FDFT1-221ENST00000532266 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
FDFT1-221ENST00000532266 THOC2Q8NI27 1593 aaKnown RBP14.11□□□□□ -0.15
FDFT1-221ENST00000532266 CUX2O14529 1486 aa14.1□□□□□ -0.15
FDFT1-221ENST00000532266 WDR62O43379 1518 aa14.1□□□□□ -0.15
FDFT1-221ENST00000532266 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
FDFT1-221ENST00000532266 EEA1Q15075 1411 aa14.07□□□□□ -0.16
FDFT1-221ENST00000532266 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
FDFT1-221ENST00000532266 TDRD9Q8NDG6 1382 aaKnown RBP14.03□□□□□ -0.16
FDFT1-221ENST00000532266 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
FDFT1-221ENST00000532266 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
FDFT1-221ENST00000532266 WDR97A6NE52 1622 aa13.99□□□□□ -0.17
FDFT1-221ENST00000532266 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
FDFT1-221ENST00000532266 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.172e-7■■■■□ 19.6
FDFT1-221ENST00000532266 IGF1RP08069 1367 aa13.96□□□□□ -0.17
FDFT1-221ENST00000532266 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
FDFT1-221ENST00000532266 UBTFP17480 764 aaKnown RBP13.95□□□□□ -0.18
FDFT1-221ENST00000532266 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
FDFT1-221ENST00000532266 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
FDFT1-221ENST00000532266 RAPGEF2Q9Y4G8 1499 aa13.92□□□□□ -0.18
FDFT1-221ENST00000532266 CARMIL1Q5VZK9 1371 aa13.91□□□□□ -0.18
FDFT1-221ENST00000532266 GOLGA3Q08378 1498 aa13.91□□□□□ -0.18
FDFT1-221ENST00000532266 KIF21BO75037 1637 aa13.9□□□□□ -0.18
FDFT1-221ENST00000532266 PRXQ9BXM0 1461 aa13.89□□□□□ -0.19
FDFT1-221ENST00000532266 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
FDFT1-221ENST00000532266 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
FDFT1-221ENST00000532266 RANGAP1P46060 587 aaPredicted RBP13.86□□□□□ -0.19
FDFT1-221ENST00000532266 GRIN2BQ13224 1484 aa13.86□□□□□ -0.19
FDFT1-221ENST00000532266 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
FDFT1-221ENST00000532266 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.19
FDFT1-221ENST00000532266 CUL7Q14999 1698 aa13.82□□□□□ -0.2
FDFT1-221ENST00000532266 SNAPC4Q5SXM2 1469 aa13.81□□□□□ -0.2
FDFT1-221ENST00000532266 FBLN2P98095 1184 aa13.78□□□□□ -0.2
FDFT1-221ENST00000532266 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
FDFT1-221ENST00000532266 ADAMTS12P58397 1594 aa13.78□□□□□ -0.2
FDFT1-221ENST00000532266 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
FDFT1-221ENST00000532266 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
FDFT1-221ENST00000532266 MAGI1Q96QZ7 1491 aaPredicted RBP13.73□□□□□ -0.21
FDFT1-221ENST00000532266 CLIP1P30622 1438 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms