RNA–Protein interactions for RNA: ENST00000532101.5

FOXRED1-212, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-212ENST00000532101 NISCHQ9Y2I1 1504 aa35.77■■■■□ 3.32
FOXRED1-212ENST00000532101 ABCC9O60706 1549 aa33■■■□□ 2.87
FOXRED1-212ENST00000532101 CCDC180Q9P1Z9 1646 aa32.23■■■□□ 2.75
FOXRED1-212ENST00000532101 DNAJC5BQ9UF47 199 aa31.72■■■□□ 2.67
FOXRED1-212ENST00000532101 RB1CC1Q8TDY2 1594 aa31.02■■■□□ 2.56
FOXRED1-212ENST00000532101 NACADO15069 1562 aa30.66■■■□□ 2.5
FOXRED1-212ENST00000532101 PABPN1Q86U42 306 aaKnown RBP eCLIP30.65■■■□□ 2.5
FOXRED1-212ENST00000532101 UNC13AQ9UPW8 1703 aa30.43■■■□□ 2.46
FOXRED1-212ENST00000532101 DCAF8L2P0C7V8 631 aa30.38■■■□□ 2.45
FOXRED1-212ENST00000532101 BICRAQ9NZM4 1560 aa30.27■■■□□ 2.44
FOXRED1-212ENST00000532101 MYO15BQ96JP2 1530 aa30■■■□□ 2.39
FOXRED1-212ENST00000532101 ZCCHC6Q5VYS8 1495 aaKnown RBP29.81■■■□□ 2.36
FOXRED1-212ENST00000532101 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
FOXRED1-212ENST00000532101 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
FOXRED1-212ENST00000532101 DCAF1Q9Y4B6 1507 aa29.65■■■□□ 2.34
FOXRED1-212ENST00000532101 SHROOM4Q9ULL8 1493 aa29.63■■■□□ 2.33
FOXRED1-212ENST00000532101 DNAJC5Q9H3Z4 198 aa29.55■■■□□ 2.32
FOXRED1-212ENST00000532101 EIF4G1Q04637 1599 aaKnown RBP29.52■■■□□ 2.32
FOXRED1-212ENST00000532101 SCRIBQ14160 1630 aa29.38■■■□□ 2.29
FOXRED1-212ENST00000532101 CUX2O14529 1486 aa28.67■■■□□ 2.18
FOXRED1-212ENST00000532101 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
FOXRED1-212ENST00000532101 NCAPD3P42695 1498 aa28.35■■■□□ 2.13
FOXRED1-212ENST00000532101 NESP48681 1621 aa28.19■■■□□ 2.1
FOXRED1-212ENST00000532101 ATAD2BQ9ULI0 1458 aa28.18■■■□□ 2.1
FOXRED1-212ENST00000532101 HMGXB3Q12766 1538 aa28.03■■■□□ 2.08
FOXRED1-212ENST00000532101 THOC2Q8NI27 1593 aaKnown RBP28■■■□□ 2.07
FOXRED1-212ENST00000532101 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
FOXRED1-212ENST00000532101 SMARCA4P51532 1647 aa27.95■■■□□ 2.06
FOXRED1-212ENST00000532101 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
FOXRED1-212ENST00000532101 BAZ1BQ9UIG0 1483 aaKnown RBP27.81■■■□□ 2.04
FOXRED1-212ENST00000532101 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
FOXRED1-212ENST00000532101 KIF21AQ7Z4S6 1674 aa27.76■■■□□ 2.03
FOXRED1-212ENST00000532101 PEG3Q9GZU2 1588 aa27.69■■■□□ 2.02
FOXRED1-212ENST00000532101 BAZ1AQ9NRL2 1556 aaPredicted RBP27.67■■■□□ 2.02
FOXRED1-212ENST00000532101 PDS5BQ9NTI5 1447 aa27.63■■■□□ 2.01
FOXRED1-212ENST00000532101 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
FOXRED1-212ENST00000532101 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
FOXRED1-212ENST00000532101 CADPSQ9ULU8 1353 aa27.45■■□□□ 1.98
FOXRED1-212ENST00000532101 WDR62O43379 1518 aa27.44■■□□□ 1.98
FOXRED1-212ENST00000532101 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
FOXRED1-212ENST00000532101 OSCARQ8IYS5 282 aa27.27■■□□□ 1.96
FOXRED1-212ENST00000532101 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
FOXRED1-212ENST00000532101 WIZO95785 1651 aa27.19■■□□□ 1.94
FOXRED1-212ENST00000532101 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
FOXRED1-212ENST00000532101 RIMBP3CA6NJZ7 1639 aa27.02■■□□□ 1.92
FOXRED1-212ENST00000532101 RIMBP3BA6NNM3 1639 aa27.02■■□□□ 1.92
FOXRED1-212ENST00000532101 RIMBP3Q9UFD9 1639 aa27.02■■□□□ 1.92
FOXRED1-212ENST00000532101 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
FOXRED1-212ENST00000532101 CFTRP13569 1480 aa27■■□□□ 1.91
FOXRED1-212ENST00000532101 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
FOXRED1-212ENST00000532101 ARHGEF11O15085 1522 aa26.85■■□□□ 1.89
FOXRED1-212ENST00000532101 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
FOXRED1-212ENST00000532101 SUPT5HO00267 1087 aaKnown RBP26.73■■□□□ 1.87
FOXRED1-212ENST00000532101 CYB5RLQ6IPT4 315 aa26.71■■□□□ 1.87
FOXRED1-212ENST00000532101 CCDC88BA6NC98 1476 aa26.69■■□□□ 1.86
FOXRED1-212ENST00000532101 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
FOXRED1-212ENST00000532101 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
FOXRED1-212ENST00000532101 TRHP20396 242 aaPredicted RBP26.59■■□□□ 1.85
FOXRED1-212ENST00000532101 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
FOXRED1-212ENST00000532101 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
FOXRED1-212ENST00000532101 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
FOXRED1-212ENST00000532101 CHD1O14646 1710 aa26.51■■□□□ 1.83
FOXRED1-212ENST00000532101 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.823e-6■■■□□ 16.8
FOXRED1-212ENST00000532101 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.82
FOXRED1-212ENST00000532101 ABCC8Q09428 1581 aa26.37■■□□□ 1.81
FOXRED1-212ENST00000532101 FBLN2P98095 1184 aa26.36■■□□□ 1.81
FOXRED1-212ENST00000532101 DNMBPQ6XZF7 1577 aa26.36■■□□□ 1.81
FOXRED1-212ENST00000532101 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
FOXRED1-212ENST00000532101 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
FOXRED1-212ENST00000532101 CLASP1Q7Z460 1538 aa26.19■■□□□ 1.78
FOXRED1-212ENST00000532101 RAD54L2Q9Y4B4 1467 aa26.19■■□□□ 1.78
FOXRED1-212ENST00000532101 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
FOXRED1-212ENST00000532101 SNAPC4Q5SXM2 1469 aa26.11■■□□□ 1.77
FOXRED1-212ENST00000532101 SOGA1O94964 1423 aa26.09■■□□□ 1.77
FOXRED1-212ENST00000532101 SYNJ1O43426 1573 aa26.04■■□□□ 1.76
FOXRED1-212ENST00000532101 CHMP7Q8WUX9 453 aaPredicted RBP26.04■■□□□ 1.76
FOXRED1-212ENST00000532101 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
FOXRED1-212ENST00000532101 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
FOXRED1-212ENST00000532101 WDR97A6NE52 1622 aa25.96■■□□□ 1.75
FOXRED1-212ENST00000532101 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
FOXRED1-212ENST00000532101 SYNJ2O15056 1496 aa25.92■■□□□ 1.74
FOXRED1-212ENST00000532101 GRIN2BQ13224 1484 aa25.92■■□□□ 1.74
FOXRED1-212ENST00000532101 CUX1P39880 1505 aa25.86■■□□□ 1.73
FOXRED1-212ENST00000532101 ERCC6L2Q5T890 1561 aa25.8■■□□□ 1.72
FOXRED1-212ENST00000532101 PBRM1Q86U86 1689 aa25.78■■□□□ 1.72
FOXRED1-212ENST00000532101 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
FOXRED1-212ENST00000532101 ABCA5Q8WWZ7 1642 aa25.66■■□□□ 1.7
FOXRED1-212ENST00000532101 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
FOXRED1-212ENST00000532101 KIF13AQ9H1H9 1805 aa25.63■■□□□ 1.69
FOXRED1-212ENST00000532101 ABCA10Q8WWZ4 1543 aa25.63■■□□□ 1.69
FOXRED1-212ENST00000532101 CEP170Q5SW79 1584 aa25.62■■□□□ 1.69
FOXRED1-212ENST00000532101 GRIN2AQ12879 1464 aa25.61■■□□□ 1.69
FOXRED1-212ENST00000532101 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
FOXRED1-212ENST00000532101 NUP160Q12769 1436 aa25.57■■□□□ 1.68
FOXRED1-212ENST00000532101 SHROOM2Q13796 1616 aa25.54■■□□□ 1.68
FOXRED1-212ENST00000532101 ADAMTS12P58397 1594 aa25.5■■□□□ 1.67
FOXRED1-212ENST00000532101 KDM4FA0A1W2PPD8 638 aa25.39■■□□□ 1.66
FOXRED1-212ENST00000532101 FHAD1B1AJZ9 1412 aa25.38■■□□□ 1.65
FOXRED1-212ENST00000532101 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
FOXRED1-212ENST00000532101 FAM69CQ0P6D2 419 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms