RNA–Protein interactions for RNA: ENST00000531814.5

SWAP70-205, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 3

Gene SWAP70, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-205ENST00000531814 NISCHQ9Y2I1 1504 aa42.22■■■■■ 4.35
SWAP70-205ENST00000531814 ABCC9O60706 1549 aa38.78■■■■□ 3.8
SWAP70-205ENST00000531814 CCDC180Q9P1Z9 1646 aa38.29■■■■□ 3.72
SWAP70-205ENST00000531814 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.48
SWAP70-205ENST00000531814 RB1CC1Q8TDY2 1594 aa36.75■■■■□ 3.47
SWAP70-205ENST00000531814 NACADO15069 1562 aa36.32■■■■□ 3.41
SWAP70-205ENST00000531814 DCAF8L2P0C7V8 631 aa35.95■■■■□ 3.35
SWAP70-205ENST00000531814 PABPN1Q86U42 306 aaKnown RBP eCLIP35.94■■■■□ 3.34
SWAP70-205ENST00000531814 UNC13AQ9UPW8 1703 aa35.83■■■■□ 3.33
SWAP70-205ENST00000531814 MYO15BQ96JP2 1530 aa35.59■■■■□ 3.29
SWAP70-205ENST00000531814 BICRAQ9NZM4 1560 aa35.54■■■■□ 3.28
SWAP70-205ENST00000531814 SHROOM4Q9ULL8 1493 aa35.2■■■■□ 3.23
SWAP70-205ENST00000531814 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
SWAP70-205ENST00000531814 CC2D2AQ9P2K1 1620 aa35.03■■■■□ 3.2
SWAP70-205ENST00000531814 DCAF1Q9Y4B6 1507 aa34.89■■■■□ 3.18
SWAP70-205ENST00000531814 ZCCHC6Q5VYS8 1495 aaKnown RBP34.85■■■■□ 3.17
SWAP70-205ENST00000531814 EIF4G1Q04637 1599 aaKnown RBP34.8■■■■□ 3.16
SWAP70-205ENST00000531814 SCRIBQ14160 1630 aa34.76■■■■□ 3.15
SWAP70-205ENST00000531814 DNAJC5Q9H3Z4 198 aa34.38■■■■□ 3.09
SWAP70-205ENST00000531814 CUX2O14529 1486 aa33.78■■■■□ 3
SWAP70-205ENST00000531814 ERCC6Q03468 1493 aa33.65■■■□□ 2.98
SWAP70-205ENST00000531814 NCAPD3P42695 1498 aa33.47■■■□□ 2.95
SWAP70-205ENST00000531814 ATAD2BQ9ULI0 1458 aa33.25■■■□□ 2.91
SWAP70-205ENST00000531814 SMARCA2P51531 1590 aa33.25■■■□□ 2.91
SWAP70-205ENST00000531814 HMGXB3Q12766 1538 aa33.22■■■□□ 2.91
SWAP70-205ENST00000531814 SMARCA4P51532 1647 aa33.1■■■□□ 2.89
SWAP70-205ENST00000531814 NESP48681 1621 aa33.07■■■□□ 2.88
SWAP70-205ENST00000531814 BAZ1BQ9UIG0 1483 aaKnown RBP32.98■■■□□ 2.87
SWAP70-205ENST00000531814 THOC2Q8NI27 1593 aaKnown RBP32.94■■■□□ 2.86
SWAP70-205ENST00000531814 BAZ1AQ9NRL2 1556 aaPredicted RBP32.9■■■□□ 2.86
SWAP70-205ENST00000531814 LAMC3Q9Y6N6 1575 aa32.9■■■□□ 2.86
SWAP70-205ENST00000531814 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
SWAP70-205ENST00000531814 PDS5BQ9NTI5 1447 aa32.74■■■□□ 2.83
SWAP70-205ENST00000531814 KIF21AQ7Z4S6 1674 aa32.72■■■□□ 2.83
SWAP70-205ENST00000531814 TRIM41Q8WV44 630 aa32.66■■■□□ 2.82
SWAP70-205ENST00000531814 MROH2BQ7Z745 1585 aa32.47■■■□□ 2.79
SWAP70-205ENST00000531814 MRC2Q9UBG0 1479 aa32.45■■■□□ 2.79
SWAP70-205ENST00000531814 CADPSQ9ULU8 1353 aa32.43■■■□□ 2.78
SWAP70-205ENST00000531814 WDR62O43379 1518 aa32.37■■■□□ 2.77
SWAP70-205ENST00000531814 CEP164Q9UPV0 1460 aa32.23■■■□□ 2.75
SWAP70-205ENST00000531814 OSCARQ8IYS5 282 aa32.11■■■□□ 2.73
SWAP70-205ENST00000531814 WIZO95785 1651 aa32.08■■■□□ 2.73
SWAP70-205ENST00000531814 FANCD2Q9BXW9 1451 aa32.08■■■□□ 2.73
SWAP70-205ENST00000531814 CFTRP13569 1480 aa31.92■■■□□ 2.7
SWAP70-205ENST00000531814 URB2Q14146 1524 aaKnown RBP31.79■■■□□ 2.68
SWAP70-205ENST00000531814 RIMBP3CA6NJZ7 1639 aa31.73■■■□□ 2.67
SWAP70-205ENST00000531814 RIMBP3BA6NNM3 1639 aa31.73■■■□□ 2.67
SWAP70-205ENST00000531814 RIMBP3Q9UFD9 1639 aa31.73■■■□□ 2.67
SWAP70-205ENST00000531814 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.66
SWAP70-205ENST00000531814 PRDM2Q13029 1718 aa31.68■■■□□ 2.66
SWAP70-205ENST00000531814 IFT140Q96RY7 1462 aa31.59■■■□□ 2.65
SWAP70-205ENST00000531814 RSF1Q96T23 1441 aaPredicted RBP31.57■■■□□ 2.64
SWAP70-205ENST00000531814 ARHGEF11O15085 1522 aa31.56■■■□□ 2.64
SWAP70-205ENST00000531814 ZNF608Q9ULD9 1512 aaPredicted RBP31.48■■■□□ 2.63
SWAP70-205ENST00000531814 ABCC8Q09428 1581 aa31.39■■■□□ 2.62
SWAP70-205ENST00000531814 TOPBP1Q92547 1522 aa31.38■■■□□ 2.61
SWAP70-205ENST00000531814 EIF4G3O43432 1585 aaKnown RBP31.38■■■□□ 2.61
SWAP70-205ENST00000531814 CYB5RLQ6IPT4 315 aa31.36■■■□□ 2.61
SWAP70-205ENST00000531814 TRHP20396 242 aaPredicted RBP31.3■■■□□ 2.6
SWAP70-205ENST00000531814 CCDC88BA6NC98 1476 aa31.27■■■□□ 2.6
SWAP70-205ENST00000531814 CHD1O14646 1710 aa31.27■■■□□ 2.6
SWAP70-205ENST00000531814 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.59
SWAP70-205ENST00000531814 ARAP1Q96P48 1450 aa31.17■■■□□ 2.58
SWAP70-205ENST00000531814 FBLN2P98095 1184 aa31.16■■■□□ 2.58
SWAP70-205ENST00000531814 TARBP1Q13395 1621 aaKnown RBP31.14■■■□□ 2.58
SWAP70-205ENST00000531814 AQRO60306 1485 aaKnown RBP eCLIP31.14■■■□□ 2.57
SWAP70-205ENST00000531814 POLA1P09884 1462 aaPredicted RBP31.01■■■□□ 2.56
SWAP70-205ENST00000531814 AEBP2Q6ZN18 517 aaPredicted RBP30.94■■■□□ 2.54
SWAP70-205ENST00000531814 WDR97A6NE52 1622 aa30.92■■■□□ 2.54
SWAP70-205ENST00000531814 SYNJ1O43426 1573 aa30.89■■■□□ 2.54
SWAP70-205ENST00000531814 SOGA1O94964 1423 aa30.89■■■□□ 2.53
SWAP70-205ENST00000531814 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
SWAP70-205ENST00000531814 CLASP1Q7Z460 1538 aa30.85■■■□□ 2.53
SWAP70-205ENST00000531814 RAD54L2Q9Y4B4 1467 aa30.85■■■□□ 2.53
SWAP70-205ENST00000531814 TDRD9Q8NDG6 1382 aaKnown RBP30.85■■■□□ 2.53
SWAP70-205ENST00000531814 CHMP7Q8WUX9 453 aaPredicted RBP30.84■■■□□ 2.53
SWAP70-205ENST00000531814 MAGI1Q96QZ7 1491 aaPredicted RBP30.82■■■□□ 2.52
SWAP70-205ENST00000531814 FGD5Q6ZNL6 1462 aa30.74■■■□□ 2.51
SWAP70-205ENST00000531814 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
SWAP70-205ENST00000531814 SYNJ2O15056 1496 aa30.7■■■□□ 2.5
SWAP70-205ENST00000531814 GAPVD1Q14C86 1478 aa30.6■■■□□ 2.49
SWAP70-205ENST00000531814 PBRM1Q86U86 1689 aa30.58■■■□□ 2.49
SWAP70-205ENST00000531814 CUX1P39880 1505 aa30.57■■■□□ 2.48
SWAP70-205ENST00000531814 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
SWAP70-205ENST00000531814 ABCA10Q8WWZ4 1543 aa30.37■■■□□ 2.45
SWAP70-205ENST00000531814 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
SWAP70-205ENST00000531814 CEP170Q5SW79 1584 aa30.24■■■□□ 2.43
SWAP70-205ENST00000531814 ERCC6L2Q5T890 1561 aa30.24■■■□□ 2.43
SWAP70-205ENST00000531814 ADAMTS12P58397 1594 aa30.2■■■□□ 2.43
SWAP70-205ENST00000531814 NUP160Q12769 1436 aa30.2■■■□□ 2.42
SWAP70-205ENST00000531814 WRNQ14191 1432 aaPredicted RBP eCLIP30.17■■■□□ 2.42
SWAP70-205ENST00000531814 SHROOM2Q13796 1616 aa30.15■■■□□ 2.42
SWAP70-205ENST00000531814 KIF13AQ9H1H9 1805 aa30.11■■■□□ 2.41
SWAP70-205ENST00000531814 FHAD1B1AJZ9 1412 aa30.11■■■□□ 2.41
SWAP70-205ENST00000531814 ERICH3Q5RHP9 1530 aa30.02■■■□□ 2.4
SWAP70-205ENST00000531814 BIVM-ERCC5R4GMW8 1640 aa29.99■■■□□ 2.39
SWAP70-205ENST00000531814 TOP2BQ02880 1626 aa29.98■■■□□ 2.39
SWAP70-205ENST00000531814 PRG4Q92954 1404 aaPredicted RBP29.97■■■□□ 2.39
SWAP70-205ENST00000531814 NPM1P06748 294 aaKnown RBP eCLIP29.96■■■□□ 2.39
SWAP70-205ENST00000531814 FAM69CQ0P6D2 419 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms