RNA–Protein interactions for RNA: ENST00000531790.5

SSR2-216, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 476 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-216ENST00000531790 NISCHQ9Y2I1 1504 aa17.56■□□□□ 0.4
SSR2-216ENST00000531790 ABCC9O60706 1549 aa17.01■□□□□ 0.31
SSR2-216ENST00000531790 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
SSR2-216ENST00000531790 CCDC180Q9P1Z9 1646 aa16.02■□□□□ 0.16
SSR2-216ENST00000531790 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
SSR2-216ENST00000531790 DNAJC5Q9H3Z4 198 aa15.71■□□□□ 0.11
SSR2-216ENST00000531790 RB1CC1Q8TDY2 1594 aa15.67■□□□□ 0.1
SSR2-216ENST00000531790 UNC13AQ9UPW8 1703 aa15.41■□□□□ 0.06
SSR2-216ENST00000531790 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
SSR2-216ENST00000531790 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.04
SSR2-216ENST00000531790 NACADO15069 1562 aa15.32■□□□□ 0.04
SSR2-216ENST00000531790 BICRAQ9NZM4 1560 aa15.3■□□□□ 0.04
SSR2-216ENST00000531790 CC2D2AQ9P2K1 1620 aa15.25■□□□□ 0.03
SSR2-216ENST00000531790 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
SSR2-216ENST00000531790 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
SSR2-216ENST00000531790 CUX2O14529 1486 aa14.79□□□□□ -0.04
SSR2-216ENST00000531790 SHROOM4Q9ULL8 1493 aa14.78□□□□□ -0.04
SSR2-216ENST00000531790 SCRIBQ14160 1630 aa14.77□□□□□ -0.04
SSR2-216ENST00000531790 MYO15BQ96JP2 1530 aa14.73□□□□□ -0.05
SSR2-216ENST00000531790 ERCC6Q03468 1493 aa14.69□□□□□ -0.06
SSR2-216ENST00000531790 NESP48681 1621 aa14.4□□□□□ -0.1
SSR2-216ENST00000531790 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
SSR2-216ENST00000531790 THOC2Q8NI27 1593 aaKnown RBP14.31□□□□□ -0.12
SSR2-216ENST00000531790 DCAF1Q9Y4B6 1507 aa14.31□□□□□ -0.12
SSR2-216ENST00000531790 SMARCA2P51531 1590 aa14.29□□□□□ -0.12
SSR2-216ENST00000531790 NCAPD3P42695 1498 aa14.17□□□□□ -0.14
SSR2-216ENST00000531790 AEBP2Q6ZN18 517 aaPredicted RBP14.16□□□□□ -0.14
SSR2-216ENST00000531790 KIF21AQ7Z4S6 1674 aa14.15□□□□□ -0.14
SSR2-216ENST00000531790 BAZ1AQ9NRL2 1556 aaPredicted RBP14.12□□□□□ -0.15
SSR2-216ENST00000531790 ATAD2BQ9ULI0 1458 aa14.08□□□□□ -0.16
SSR2-216ENST00000531790 OSCARQ8IYS5 282 aa14.04□□□□□ -0.16
SSR2-216ENST00000531790 RIMBP3CA6NJZ7 1639 aa14.02□□□□□ -0.16
SSR2-216ENST00000531790 RIMBP3BA6NNM3 1639 aa14.02□□□□□ -0.16
SSR2-216ENST00000531790 RIMBP3Q9UFD9 1639 aa14.02□□□□□ -0.16
SSR2-216ENST00000531790 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
SSR2-216ENST00000531790 HMGXB3Q12766 1538 aa14□□□□□ -0.17
SSR2-216ENST00000531790 LAMC3Q9Y6N6 1575 aa13.99□□□□□ -0.17
SSR2-216ENST00000531790 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
SSR2-216ENST00000531790 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
SSR2-216ENST00000531790 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
SSR2-216ENST00000531790 SMARCA4P51532 1647 aa13.9□□□□□ -0.19
SSR2-216ENST00000531790 WDR62O43379 1518 aa13.89□□□□□ -0.19
SSR2-216ENST00000531790 CYB5RLQ6IPT4 315 aa13.88□□□□□ -0.19
SSR2-216ENST00000531790 ARHGEF11O15085 1522 aa13.87□□□□□ -0.19
SSR2-216ENST00000531790 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
SSR2-216ENST00000531790 CEP164Q9UPV0 1460 aa13.73□□□□□ -0.21
SSR2-216ENST00000531790 ARAP1Q96P48 1450 aa13.7□□□□□ -0.22
SSR2-216ENST00000531790 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
SSR2-216ENST00000531790 FANCD2Q9BXW9 1451 aa13.65□□□□□ -0.22
SSR2-216ENST00000531790 PEG3Q9GZU2 1588 aa13.64□□□□□ -0.23
SSR2-216ENST00000531790 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
SSR2-216ENST00000531790 ZNF608Q9ULD9 1512 aaPredicted RBP13.61□□□□□ -0.23
SSR2-216ENST00000531790 MROH2BQ7Z745 1585 aa13.61□□□□□ -0.23
SSR2-216ENST00000531790 CHD1O14646 1710 aa13.54□□□□□ -0.24
SSR2-216ENST00000531790 FBLN2P98095 1184 aa13.53□□□□□ -0.24
SSR2-216ENST00000531790 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
SSR2-216ENST00000531790 EIF4G3O43432 1585 aaKnown RBP13.46□□□□□ -0.25
SSR2-216ENST00000531790 IFT140Q96RY7 1462 aa13.44□□□□□ -0.26
SSR2-216ENST00000531790 WIZO95785 1651 aa13.44□□□□□ -0.26
SSR2-216ENST00000531790 RSF1Q96T23 1441 aaPredicted RBP13.42□□□□□ -0.26
SSR2-216ENST00000531790 CFTRP13569 1480 aa13.41□□□□□ -0.26
SSR2-216ENST00000531790 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.27
SSR2-216ENST00000531790 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
SSR2-216ENST00000531790 CLASP1Q7Z460 1538 aa13.28□□□□□ -0.28
SSR2-216ENST00000531790 KDM4FA0A1W2PPD8 638 aa13.26□□□□□ -0.29
SSR2-216ENST00000531790 GAPVD1Q14C86 1478 aa13.24□□□□□ -0.29
SSR2-216ENST00000531790 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
SSR2-216ENST00000531790 TARBP1Q13395 1621 aaKnown RBP13.22□□□□□ -0.29
SSR2-216ENST00000531790 SNAPC4Q5SXM2 1469 aa13.22□□□□□ -0.29
SSR2-216ENST00000531790 SYNJ1O43426 1573 aa13.2□□□□□ -0.3
SSR2-216ENST00000531790 CHMP7Q8WUX9 453 aaPredicted RBP13.19□□□□□ -0.3
SSR2-216ENST00000531790 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
SSR2-216ENST00000531790 RAD54L2Q9Y4B4 1467 aa13.17□□□□□ -0.3
SSR2-216ENST00000531790 KIF13AQ9H1H9 1805 aa13.16□□□□□ -0.3
SSR2-216ENST00000531790 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
SSR2-216ENST00000531790 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
SSR2-216ENST00000531790 POLA1P09884 1462 aaPredicted RBP13.12□□□□□ -0.31
SSR2-216ENST00000531790 TOP2AP11388 1531 aaKnown RBP13.12□□□□□ -0.31
SSR2-216ENST00000531790 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
SSR2-216ENST00000531790 HECW2Q9P2P5 1572 aa13.06□□□□□ -0.32
SSR2-216ENST00000531790 SOGA1O94964 1423 aa13.05□□□□□ -0.32
SSR2-216ENST00000531790 FAM69CQ0P6D2 419 aa13.04□□□□□ -0.32
SSR2-216ENST00000531790 KDM6BO15054 1643 aa13.03□□□□□ -0.32
SSR2-216ENST00000531790 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
SSR2-216ENST00000531790 MAGI1Q96QZ7 1491 aaPredicted RBP13.03□□□□□ -0.32
SSR2-216ENST00000531790 CCDC88BA6NC98 1476 aa13.02□□□□□ -0.33
SSR2-216ENST00000531790 GRIN2BQ13224 1484 aa12.98□□□□□ -0.33
SSR2-216ENST00000531790 TSPOAP1O95153 1857 aa12.98□□□□□ -0.33
SSR2-216ENST00000531790 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
SSR2-216ENST00000531790 FBXO41Q8TF61 875 aa12.98□□□□□ -0.33
SSR2-216ENST00000531790 ADGRL1O94910 1474 aa12.97□□□□□ -0.33
SSR2-216ENST00000531790 CEP170Q5SW79 1584 aa12.96□□□□□ -0.33
SSR2-216ENST00000531790 FGD5Q6ZNL6 1462 aa12.96□□□□□ -0.34
SSR2-216ENST00000531790 LMTK3Q96Q04 1460 aa12.96□□□□□ -0.34
SSR2-216ENST00000531790 PBRM1Q86U86 1689 aa12.95□□□□□ -0.34
SSR2-216ENST00000531790 ABCC10Q5T3U5 1492 aa12.92□□□□□ -0.34
SSR2-216ENST00000531790 DIP2BQ9P265 1576 aa12.91□□□□□ -0.34
SSR2-216ENST00000531790 ILDR2Q71H61 639 aa12.88□□□□□ -0.35
SSR2-216ENST00000531790 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
SSR2-216ENST00000531790 GRIN2AQ12879 1464 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms