RNA–Protein interactions for RNA: ENST00000531748.1

DENND4B-213, Transcript of DENN domain containing 4B, humanhuman

TSL 4

Gene DENND4B, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-213ENST00000531748 NISCHQ9Y2I1 1504 aa48.99■■■■■ 5.43
DENND4B-213ENST00000531748 CCDC180Q9P1Z9 1646 aa44.16■■■■■ 4.66
DENND4B-213ENST00000531748 ABCC9O60706 1549 aa44.09■■■■■ 4.65
DENND4B-213ENST00000531748 RB1CC1Q8TDY2 1594 aa41.98■■■■■ 4.31
DENND4B-213ENST00000531748 NACADO15069 1562 aa41.64■■■■■ 4.26
DENND4B-213ENST00000531748 DNAJC5BQ9UF47 199 aa41.3■■■■■ 4.2
DENND4B-213ENST00000531748 DCAF8L2P0C7V8 631 aa41.24■■■■■ 4.19
DENND4B-213ENST00000531748 UNC13AQ9UPW8 1703 aa41.22■■■■■ 4.19
DENND4B-213ENST00000531748 MYO15BQ96JP2 1530 aa41.01■■■■■ 4.16
DENND4B-213ENST00000531748 PABPN1Q86U42 306 aaKnown RBP eCLIP40.92■■■■■ 4.14
DENND4B-213ENST00000531748 BICRAQ9NZM4 1560 aa40.77■■■■■ 4.12
DENND4B-213ENST00000531748 ZCCHC6Q5VYS8 1495 aaKnown RBP40.62■■■■■ 4.09
DENND4B-213ENST00000531748 DCAF1Q9Y4B6 1507 aa40.47■■■■■ 4.07
DENND4B-213ENST00000531748 SCRIBQ14160 1630 aa40.19■■■■■ 4.02
DENND4B-213ENST00000531748 SHROOM4Q9ULL8 1493 aa40.19■■■■■ 4.02
DENND4B-213ENST00000531748 CC2D2AQ9P2K1 1620 aa39.89■■■■□ 3.98
DENND4B-213ENST00000531748 EIF4G1Q04637 1599 aaKnown RBP39.77■■■■□ 3.96
DENND4B-213ENST00000531748 CECR2Q9BXF3 1484 aa39.71■■■■□ 3.95
DENND4B-213ENST00000531748 NCAPD3P42695 1498 aa38.36■■■■□ 3.73
DENND4B-213ENST00000531748 SMARCA4P51532 1647 aa38.32■■■■□ 3.73
DENND4B-213ENST00000531748 ATAD2BQ9ULI0 1458 aa38.27■■■■□ 3.72
DENND4B-213ENST00000531748 SMARCA2P51531 1590 aa38.22■■■■□ 3.71
DENND4B-213ENST00000531748 HMGXB3Q12766 1538 aa38.18■■■■□ 3.7
DENND4B-213ENST00000531748 ERCC6Q03468 1493 aa38.08■■■■□ 3.69
DENND4B-213ENST00000531748 BAZ1AQ9NRL2 1556 aaPredicted RBP38.06■■■■□ 3.68
DENND4B-213ENST00000531748 CUX2O14529 1486 aa38.03■■■■□ 3.68
DENND4B-213ENST00000531748 DNAJC5Q9H3Z4 198 aa37.98■■■■□ 3.67
DENND4B-213ENST00000531748 BAZ1BQ9UIG0 1483 aaKnown RBP37.93■■■■□ 3.66
DENND4B-213ENST00000531748 PEG3Q9GZU2 1588 aa37.91■■■■□ 3.66
DENND4B-213ENST00000531748 NESP48681 1621 aa37.87■■■■□ 3.65
DENND4B-213ENST00000531748 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.63
DENND4B-213ENST00000531748 LAMC3Q9Y6N6 1575 aa37.62■■■■□ 3.61
DENND4B-213ENST00000531748 THOC2Q8NI27 1593 aaKnown RBP37.6■■■■□ 3.61
DENND4B-213ENST00000531748 KIF21AQ7Z4S6 1674 aa37.53■■■■□ 3.6
DENND4B-213ENST00000531748 WIZO95785 1651 aa37.38■■■■□ 3.57
DENND4B-213ENST00000531748 PDS5BQ9NTI5 1447 aa37.31■■■■□ 3.56
DENND4B-213ENST00000531748 CADPSQ9ULU8 1353 aa37.17■■■■□ 3.54
DENND4B-213ENST00000531748 MRC2Q9UBG0 1479 aa37.06■■■■□ 3.52
DENND4B-213ENST00000531748 WDR62O43379 1518 aa37■■■■□ 3.51
DENND4B-213ENST00000531748 CEP164Q9UPV0 1460 aa36.9■■■■□ 3.5
DENND4B-213ENST00000531748 RSF1Q96T23 1441 aaPredicted RBP36.88■■■■□ 3.49
DENND4B-213ENST00000531748 TOP2AP11388 1531 aaKnown RBP36.87■■■■□ 3.49
DENND4B-213ENST00000531748 FANCD2Q9BXW9 1451 aa36.82■■■■□ 3.49
DENND4B-213ENST00000531748 CFTRP13569 1480 aa36.78■■■■□ 3.48
DENND4B-213ENST00000531748 PRDM2Q13029 1718 aa36.7■■■■□ 3.47
DENND4B-213ENST00000531748 URB2Q14146 1524 aaKnown RBP36.55■■■■□ 3.44
DENND4B-213ENST00000531748 CCDC88BA6NC98 1476 aa36.37■■■■□ 3.41
DENND4B-213ENST00000531748 TRIM41Q8WV44 630 aa36.33■■■■□ 3.41
DENND4B-213ENST00000531748 OSCARQ8IYS5 282 aa36.15■■■■□ 3.38
DENND4B-213ENST00000531748 TOPBP1Q92547 1522 aa36.14■■■■□ 3.38
DENND4B-213ENST00000531748 IFT140Q96RY7 1462 aa36.13■■■■□ 3.37
DENND4B-213ENST00000531748 ZNF608Q9ULD9 1512 aaPredicted RBP36.09■■■■□ 3.37
DENND4B-213ENST00000531748 DNMBPQ6XZF7 1577 aa36.05■■■■□ 3.36
DENND4B-213ENST00000531748 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
DENND4B-213ENST00000531748 EIF4G3O43432 1585 aaKnown RBP36.01■■■■□ 3.35
DENND4B-213ENST00000531748 RIMBP3CA6NJZ7 1639 aa35.91■■■■□ 3.34
DENND4B-213ENST00000531748 RIMBP3BA6NNM3 1639 aa35.91■■■■□ 3.34
DENND4B-213ENST00000531748 RIMBP3Q9UFD9 1639 aa35.91■■■■□ 3.34
DENND4B-213ENST00000531748 TARBP1Q13395 1621 aaKnown RBP35.87■■■■□ 3.33
DENND4B-213ENST00000531748 CHD1O14646 1710 aa35.83■■■■□ 3.33
DENND4B-213ENST00000531748 POLA1P09884 1462 aaPredicted RBP35.76■■■■□ 3.32
DENND4B-213ENST00000531748 ARHGEF11O15085 1522 aa35.73■■■■□ 3.31
DENND4B-213ENST00000531748 AQRO60306 1485 aaKnown RBP eCLIP35.71■■■■□ 3.311e-10■■■■■ 88
DENND4B-213ENST00000531748 RAD54L2Q9Y4B4 1467 aa35.6■■■■□ 3.29
DENND4B-213ENST00000531748 FGD5Q6ZNL6 1462 aa35.54■■■■□ 3.28
DENND4B-213ENST00000531748 SOGA1O94964 1423 aa35.52■■■■□ 3.28
DENND4B-213ENST00000531748 WDR97A6NE52 1622 aa35.52■■■■□ 3.28
DENND4B-213ENST00000531748 CUX1P39880 1505 aa35.5■■■■□ 3.27
DENND4B-213ENST00000531748 TDRD9Q8NDG6 1382 aaKnown RBP35.46■■■■□ 3.27
DENND4B-213ENST00000531748 FBLN2P98095 1184 aa35.44■■■■□ 3.26
DENND4B-213ENST00000531748 SNAPC4Q5SXM2 1469 aa35.41■■■■□ 3.26
DENND4B-213ENST00000531748 ARAP1Q96P48 1450 aa35.37■■■■□ 3.25
DENND4B-213ENST00000531748 PBRM1Q86U86 1689 aa35.33■■■■□ 3.25
DENND4B-213ENST00000531748 CYB5RLQ6IPT4 315 aa35.32■■■■□ 3.24
DENND4B-213ENST00000531748 MAGI1Q96QZ7 1491 aaPredicted RBP35.3■■■■□ 3.24
DENND4B-213ENST00000531748 CLASP1Q7Z460 1538 aa35.29■■■■□ 3.24
DENND4B-213ENST00000531748 GRIN2BQ13224 1484 aa35.27■■■■□ 3.24
DENND4B-213ENST00000531748 SYNJ1O43426 1573 aa35.26■■■■□ 3.24
DENND4B-213ENST00000531748 SYNJ2O15056 1496 aa35.18■■■■□ 3.22
DENND4B-213ENST00000531748 CHMP7Q8WUX9 453 aaPredicted RBP35.16■■■■□ 3.22
DENND4B-213ENST00000531748 ABCA5Q8WWZ7 1642 aa35.16■■■■□ 3.22
DENND4B-213ENST00000531748 GAPVD1Q14C86 1478 aa35.14■■■■□ 3.22
DENND4B-213ENST00000531748 SUPT5HO00267 1087 aaKnown RBP35.12■■■■□ 3.21
DENND4B-213ENST00000531748 ABCA10Q8WWZ4 1543 aa35.11■■■■□ 3.21
DENND4B-213ENST00000531748 BIVM-ERCC5R4GMW8 1640 aa34.99■■■■□ 3.19
DENND4B-213ENST00000531748 TRHP20396 242 aaPredicted RBP34.98■■■■□ 3.19
DENND4B-213ENST00000531748 TOP2BQ02880 1626 aa34.94■■■■□ 3.18
DENND4B-213ENST00000531748 ADAMTS12P58397 1594 aa34.91■■■■□ 3.18
DENND4B-213ENST00000531748 WRNQ14191 1432 aaPredicted RBP eCLIP34.89■■■■□ 3.18
DENND4B-213ENST00000531748 GRIN2AQ12879 1464 aa34.84■■■■□ 3.17
DENND4B-213ENST00000531748 CEP170Q5SW79 1584 aa34.78■■■■□ 3.16
DENND4B-213ENST00000531748 ERCC6L2Q5T890 1561 aa34.73■■■■□ 3.15
DENND4B-213ENST00000531748 NUP160Q12769 1436 aa34.71■■■■□ 3.15
DENND4B-213ENST00000531748 ERICH3Q5RHP9 1530 aa34.69■■■■□ 3.14
DENND4B-213ENST00000531748 FHAD1B1AJZ9 1412 aa34.67■■■■□ 3.14
DENND4B-213ENST00000531748 SHROOM2Q13796 1616 aa34.66■■■■□ 3.14
DENND4B-213ENST00000531748 RUSC2Q8N2Y8 1516 aa34.42■■■■□ 3.1
DENND4B-213ENST00000531748 PRG4Q92954 1404 aaPredicted RBP34.35■■■■□ 3.09
DENND4B-213ENST00000531748 KIF13AQ9H1H9 1805 aa34.32■■■■□ 3.09
DENND4B-213ENST00000531748 CUL7Q14999 1698 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms