RNA–Protein interactions for RNA: ENST00000531705.1

MRPL49-206, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 5 BASIC

Gene MRPL49, Length 489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-206ENST00000531705 NISCHQ9Y2I1 1504 aa43.55■■■■■ 4.56
MRPL49-206ENST00000531705 CCDC180Q9P1Z9 1646 aa39■■■■□ 3.83
MRPL49-206ENST00000531705 ABCC9O60706 1549 aa38.42■■■■□ 3.74
MRPL49-206ENST00000531705 RB1CC1Q8TDY2 1594 aa36.79■■■■□ 3.48
MRPL49-206ENST00000531705 NACADO15069 1562 aa36.65■■■■□ 3.46
MRPL49-206ENST00000531705 MYO15BQ96JP2 1530 aa36.29■■■■□ 3.4
MRPL49-206ENST00000531705 DCAF8L2P0C7V8 631 aa36.29■■■■□ 3.4
MRPL49-206ENST00000531705 ZCCHC6Q5VYS8 1495 aaKnown RBP36.24■■■■□ 3.39
MRPL49-206ENST00000531705 UNC13AQ9UPW8 1703 aa36.21■■■■□ 3.39
MRPL49-206ENST00000531705 DCAF1Q9Y4B6 1507 aa36.02■■■■□ 3.36
MRPL49-206ENST00000531705 BICRAQ9NZM4 1560 aa35.81■■■■□ 3.32
MRPL49-206ENST00000531705 PABPN1Q86U42 306 aaKnown RBP eCLIP35.73■■■■□ 3.31
MRPL49-206ENST00000531705 DNAJC5BQ9UF47 199 aa35.59■■■■□ 3.29
MRPL49-206ENST00000531705 SCRIBQ14160 1630 aa35.53■■■■□ 3.28
MRPL49-206ENST00000531705 SHROOM4Q9ULL8 1493 aa35.27■■■■□ 3.24
MRPL49-206ENST00000531705 EIF4G1Q04637 1599 aaKnown RBP34.83■■■■□ 3.17
MRPL49-206ENST00000531705 CC2D2AQ9P2K1 1620 aa34.81■■■■□ 3.16
MRPL49-206ENST00000531705 CECR2Q9BXF3 1484 aa34.53■■■■□ 3.12
MRPL49-206ENST00000531705 SMARCA4P51532 1647 aa33.95■■■■□ 3.03
MRPL49-206ENST00000531705 NCAPD3P42695 1498 aa33.78■■■■□ 3
MRPL49-206ENST00000531705 ATAD2BQ9ULI0 1458 aa33.77■■■■□ 3
MRPL49-206ENST00000531705 BAZ1AQ9NRL2 1556 aaPredicted RBP33.77■■■■□ 3
MRPL49-206ENST00000531705 SMARCA2P51531 1590 aa33.71■■■□□ 2.99
MRPL49-206ENST00000531705 HMGXB3Q12766 1538 aa33.66■■■□□ 2.98
MRPL49-206ENST00000531705 PEG3Q9GZU2 1588 aa33.61■■■□□ 2.97
MRPL49-206ENST00000531705 MROH2BQ7Z745 1585 aa33.6■■■□□ 2.97
MRPL49-206ENST00000531705 BAZ1BQ9UIG0 1483 aaKnown RBP33.45■■■□□ 2.95
MRPL49-206ENST00000531705 WIZO95785 1651 aa33.27■■■□□ 2.92
MRPL49-206ENST00000531705 NESP48681 1621 aa33.18■■■□□ 2.9
MRPL49-206ENST00000531705 ERCC6Q03468 1493 aa33.07■■■□□ 2.88
MRPL49-206ENST00000531705 LAMC3Q9Y6N6 1575 aa33.02■■■□□ 2.88
MRPL49-206ENST00000531705 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
MRPL49-206ENST00000531705 CUX2O14529 1486 aa32.92■■■□□ 2.86
MRPL49-206ENST00000531705 KIF21AQ7Z4S6 1674 aa32.89■■■□□ 2.86
MRPL49-206ENST00000531705 THOC2Q8NI27 1593 aaKnown RBP32.86■■■□□ 2.85
MRPL49-206ENST00000531705 TOP2AP11388 1531 aaKnown RBP32.83■■■□□ 2.85
MRPL49-206ENST00000531705 CADPSQ9ULU8 1353 aa32.72■■■□□ 2.83
MRPL49-206ENST00000531705 PDS5BQ9NTI5 1447 aa32.68■■■□□ 2.82
MRPL49-206ENST00000531705 CFTRP13569 1480 aa32.52■■■□□ 2.8
MRPL49-206ENST00000531705 PRDM2Q13029 1718 aa32.47■■■□□ 2.79
MRPL49-206ENST00000531705 MRC2Q9UBG0 1479 aa32.47■■■□□ 2.79
MRPL49-206ENST00000531705 WDR62O43379 1518 aa32.43■■■□□ 2.78
MRPL49-206ENST00000531705 FANCD2Q9BXW9 1451 aa32.42■■■□□ 2.78
MRPL49-206ENST00000531705 CEP164Q9UPV0 1460 aa32.42■■■□□ 2.78
MRPL49-206ENST00000531705 CCDC88BA6NC98 1476 aa32.39■■■□□ 2.78
MRPL49-206ENST00000531705 DNAJC5Q9H3Z4 198 aa32.26■■■□□ 2.75
MRPL49-206ENST00000531705 URB2Q14146 1524 aaKnown RBP32.19■■■□□ 2.74
MRPL49-206ENST00000531705 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
MRPL49-206ENST00000531705 DNMBPQ6XZF7 1577 aa31.85■■■□□ 2.69
MRPL49-206ENST00000531705 ABCC8Q09428 1581 aa31.76■■■□□ 2.67
MRPL49-206ENST00000531705 IFT140Q96RY7 1462 aa31.72■■■□□ 2.67
MRPL49-206ENST00000531705 SUPT5HO00267 1087 aaKnown RBP31.71■■■□□ 2.67
MRPL49-206ENST00000531705 ZNF608Q9ULD9 1512 aaPredicted RBP31.7■■■□□ 2.66
MRPL49-206ENST00000531705 TARBP1Q13395 1621 aaKnown RBP31.66■■■□□ 2.66
MRPL49-206ENST00000531705 EIF4G3O43432 1585 aaKnown RBP31.63■■■□□ 2.65
MRPL49-206ENST00000531705 POLA1P09884 1462 aaPredicted RBP31.59■■■□□ 2.65
MRPL49-206ENST00000531705 CUX1P39880 1505 aa31.55■■■□□ 2.64
MRPL49-206ENST00000531705 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
MRPL49-206ENST00000531705 RAD54L2Q9Y4B4 1467 aa31.45■■■□□ 2.62
MRPL49-206ENST00000531705 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.62
MRPL49-206ENST00000531705 WDR97A6NE52 1622 aa31.39■■■□□ 2.62
MRPL49-206ENST00000531705 CHD1O14646 1710 aa31.36■■■□□ 2.61
MRPL49-206ENST00000531705 SOGA1O94964 1423 aa31.35■■■□□ 2.61
MRPL49-206ENST00000531705 OSCARQ8IYS5 282 aa31.31■■■□□ 2.6
MRPL49-206ENST00000531705 TDRD9Q8NDG6 1382 aaKnown RBP31.24■■■□□ 2.59
MRPL49-206ENST00000531705 BIVM-ERCC5R4GMW8 1640 aa31.23■■■□□ 2.59
MRPL49-206ENST00000531705 PBRM1Q86U86 1689 aa31.19■■■□□ 2.58
MRPL49-206ENST00000531705 SYNJ1O43426 1573 aa31.18■■■□□ 2.58
MRPL49-206ENST00000531705 TOP2BQ02880 1626 aa31.17■■■□□ 2.58
MRPL49-206ENST00000531705 ABCA5Q8WWZ7 1642 aa31.15■■■□□ 2.58
MRPL49-206ENST00000531705 SNAPC4Q5SXM2 1469 aa31.14■■■□□ 2.58
MRPL49-206ENST00000531705 RIMBP3CA6NJZ7 1639 aa31.13■■■□□ 2.57
MRPL49-206ENST00000531705 RIMBP3BA6NNM3 1639 aa31.13■■■□□ 2.57
MRPL49-206ENST00000531705 RIMBP3Q9UFD9 1639 aa31.13■■■□□ 2.57
MRPL49-206ENST00000531705 ABCA10Q8WWZ4 1543 aa31.12■■■□□ 2.57
MRPL49-206ENST00000531705 WRNQ14191 1432 aaPredicted RBP eCLIP31.08■■■□□ 2.57
MRPL49-206ENST00000531705 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
MRPL49-206ENST00000531705 MAGI1Q96QZ7 1491 aaPredicted RBP31.06■■■□□ 2.56
MRPL49-206ENST00000531705 GAPVD1Q14C86 1478 aa31.03■■■□□ 2.56
MRPL49-206ENST00000531705 ARHGEF11O15085 1522 aa31.02■■■□□ 2.56
MRPL49-206ENST00000531705 TRIM41Q8WV44 630 aa31.01■■■□□ 2.55
MRPL49-206ENST00000531705 FBLN2P98095 1184 aa30.95■■■□□ 2.55
MRPL49-206ENST00000531705 CLASP1Q7Z460 1538 aa30.94■■■□□ 2.54
MRPL49-206ENST00000531705 SYNJ2O15056 1496 aa30.94■■■□□ 2.54
MRPL49-206ENST00000531705 ADAMTS12P58397 1594 aa30.86■■■□□ 2.53
MRPL49-206ENST00000531705 CHMP7Q8WUX9 453 aaPredicted RBP30.8■■■□□ 2.52
MRPL49-206ENST00000531705 ARAP1Q96P48 1450 aa30.76■■■□□ 2.52
MRPL49-206ENST00000531705 ERICH3Q5RHP9 1530 aa30.74■■■□□ 2.51
MRPL49-206ENST00000531705 GRIN2AQ12879 1464 aa30.72■■■□□ 2.51
MRPL49-206ENST00000531705 CEP170Q5SW79 1584 aa30.67■■■□□ 2.5
MRPL49-206ENST00000531705 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.49
MRPL49-206ENST00000531705 NUP160Q12769 1436 aa30.6■■■□□ 2.49
MRPL49-206ENST00000531705 CYB5RLQ6IPT4 315 aa30.57■■■□□ 2.48
MRPL49-206ENST00000531705 SHROOM2Q13796 1616 aa30.52■■■□□ 2.48
MRPL49-206ENST00000531705 ERCC6L2Q5T890 1561 aa30.51■■■□□ 2.47
MRPL49-206ENST00000531705 CUL7Q14999 1698 aa30.45■■■□□ 2.46
MRPL49-206ENST00000531705 RUSC2Q8N2Y8 1516 aa30.43■■■□□ 2.46
MRPL49-206ENST00000531705 KIF27Q86VH2 1401 aa30.42■■■□□ 2.46
MRPL49-206ENST00000531705 IGF1RP08069 1367 aa30.36■■■□□ 2.45
MRPL49-206ENST00000531705 PRG4Q92954 1404 aaPredicted RBP30.2■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 272.5 ms