RNA–Protein interactions for RNA: ENST00000531688.1

IFITM3-203, Transcript of interferon induced transmembrane protein 3, humanhuman

TSL 3

Gene IFITM3, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-203ENST00000531688 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.83
IFITM3-203ENST00000531688 ABCC9O60706 1549 aa24.18■■□□□ 1.46
IFITM3-203ENST00000531688 CCDC180Q9P1Z9 1646 aa23.92■■□□□ 1.42
IFITM3-203ENST00000531688 DNAJC5BQ9UF47 199 aa23.22■■□□□ 1.31
IFITM3-203ENST00000531688 RB1CC1Q8TDY2 1594 aa22.96■■□□□ 1.27
IFITM3-203ENST00000531688 NACADO15069 1562 aa22.73■■□□□ 1.23
IFITM3-203ENST00000531688 PABPN1Q86U42 306 aaKnown RBP eCLIP22.42■■□□□ 1.18
IFITM3-203ENST00000531688 MYO15BQ96JP2 1530 aa22.39■■□□□ 1.17
IFITM3-203ENST00000531688 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.17
IFITM3-203ENST00000531688 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
IFITM3-203ENST00000531688 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
IFITM3-203ENST00000531688 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
IFITM3-203ENST00000531688 DCAF1Q9Y4B6 1507 aa21.93■■□□□ 1.1
IFITM3-203ENST00000531688 DNAJC5Q9H3Z4 198 aa21.9■■□□□ 1.1
IFITM3-203ENST00000531688 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
IFITM3-203ENST00000531688 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
IFITM3-203ENST00000531688 CC2D2AQ9P2K1 1620 aa21.84■■□□□ 1.09
IFITM3-203ENST00000531688 EIF4G1Q04637 1599 aaKnown RBP21.75■■□□□ 1.07
IFITM3-203ENST00000531688 SCRIBQ14160 1630 aa21.66■■□□□ 1.06
IFITM3-203ENST00000531688 CUX2O14529 1486 aa21.14■□□□□ 0.98
IFITM3-203ENST00000531688 NCAPD3P42695 1498 aa21■□□□□ 0.95
IFITM3-203ENST00000531688 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
IFITM3-203ENST00000531688 ATAD2BQ9ULI0 1458 aa20.83■□□□□ 0.93
IFITM3-203ENST00000531688 HMGXB3Q12766 1538 aa20.82■□□□□ 0.92
IFITM3-203ENST00000531688 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
IFITM3-203ENST00000531688 SMARCA4P51532 1647 aa20.69■□□□□ 0.9
IFITM3-203ENST00000531688 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
IFITM3-203ENST00000531688 NESP48681 1621 aa20.64■□□□□ 0.9
IFITM3-203ENST00000531688 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
IFITM3-203ENST00000531688 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
IFITM3-203ENST00000531688 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
IFITM3-203ENST00000531688 PEG3Q9GZU2 1588 aa20.58■□□□□ 0.88
IFITM3-203ENST00000531688 LAMC3Q9Y6N6 1575 aa20.57■□□□□ 0.88
IFITM3-203ENST00000531688 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
IFITM3-203ENST00000531688 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
IFITM3-203ENST00000531688 MROH2BQ7Z745 1585 aa20.32■□□□□ 0.84
IFITM3-203ENST00000531688 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
IFITM3-203ENST00000531688 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
IFITM3-203ENST00000531688 WDR62O43379 1518 aa20.27■□□□□ 0.83
IFITM3-203ENST00000531688 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
IFITM3-203ENST00000531688 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
IFITM3-203ENST00000531688 OSCARQ8IYS5 282 aa20.04■□□□□ 0.8
IFITM3-203ENST00000531688 CFTRP13569 1480 aa20.02■□□□□ 0.8
IFITM3-203ENST00000531688 WIZO95785 1651 aa20■□□□□ 0.79
IFITM3-203ENST00000531688 URB2Q14146 1524 aaKnown RBP19.89■□□□□ 0.77
IFITM3-203ENST00000531688 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
IFITM3-203ENST00000531688 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
IFITM3-203ENST00000531688 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
IFITM3-203ENST00000531688 TOP2AP11388 1531 aaKnown RBP19.84■□□□□ 0.77
IFITM3-203ENST00000531688 RSF1Q96T23 1441 aaPredicted RBP19.81■□□□□ 0.76
IFITM3-203ENST00000531688 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
IFITM3-203ENST00000531688 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
IFITM3-203ENST00000531688 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
IFITM3-203ENST00000531688 ZNF608Q9ULD9 1512 aaPredicted RBP19.68■□□□□ 0.74
IFITM3-203ENST00000531688 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
IFITM3-203ENST00000531688 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
IFITM3-203ENST00000531688 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
IFITM3-203ENST00000531688 TOPBP1Q92547 1522 aa19.63■□□□□ 0.73
IFITM3-203ENST00000531688 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
IFITM3-203ENST00000531688 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.73
IFITM3-203ENST00000531688 CCDC88BA6NC98 1476 aa19.57■□□□□ 0.72
IFITM3-203ENST00000531688 DNMBPQ6XZF7 1577 aa19.54■□□□□ 0.72
IFITM3-203ENST00000531688 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
IFITM3-203ENST00000531688 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
IFITM3-203ENST00000531688 AQRO60306 1485 aaKnown RBP eCLIP19.45■□□□□ 0.71e-6■■■■■ 29.8
IFITM3-203ENST00000531688 CHD1O14646 1710 aa19.42■□□□□ 0.7
IFITM3-203ENST00000531688 POLA1P09884 1462 aaPredicted RBP19.41■□□□□ 0.7
IFITM3-203ENST00000531688 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
IFITM3-203ENST00000531688 FBLN2P98095 1184 aa19.37■□□□□ 0.69
IFITM3-203ENST00000531688 CLASP1Q7Z460 1538 aa19.31■□□□□ 0.68
IFITM3-203ENST00000531688 SOGA1O94964 1423 aa19.31■□□□□ 0.68
IFITM3-203ENST00000531688 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
IFITM3-203ENST00000531688 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
IFITM3-203ENST00000531688 SYNJ1O43426 1573 aa19.28■□□□□ 0.68
IFITM3-203ENST00000531688 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
IFITM3-203ENST00000531688 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
IFITM3-203ENST00000531688 CHMP7Q8WUX9 453 aaPredicted RBP19.24■□□□□ 0.67
IFITM3-203ENST00000531688 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
IFITM3-203ENST00000531688 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
IFITM3-203ENST00000531688 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
IFITM3-203ENST00000531688 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
IFITM3-203ENST00000531688 CUX1P39880 1505 aa19.13■□□□□ 0.65
IFITM3-203ENST00000531688 ABCA10Q8WWZ4 1543 aa19.04■□□□□ 0.64
IFITM3-203ENST00000531688 PBRM1Q86U86 1689 aa19.01■□□□□ 0.63
IFITM3-203ENST00000531688 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
IFITM3-203ENST00000531688 GRIN2AQ12879 1464 aa18.97■□□□□ 0.63
IFITM3-203ENST00000531688 NUP160Q12769 1436 aa18.94■□□□□ 0.62
IFITM3-203ENST00000531688 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
IFITM3-203ENST00000531688 ADAMTS12P58397 1594 aa18.89■□□□□ 0.62
IFITM3-203ENST00000531688 CEP170Q5SW79 1584 aa18.89■□□□□ 0.62
IFITM3-203ENST00000531688 ERCC6L2Q5T890 1561 aa18.87■□□□□ 0.61
IFITM3-203ENST00000531688 SHROOM2Q13796 1616 aa18.86■□□□□ 0.61
IFITM3-203ENST00000531688 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
IFITM3-203ENST00000531688 ILDR1Q86SU0 546 aaPredicted RBP18.85■□□□□ 0.61
IFITM3-203ENST00000531688 ERICH3Q5RHP9 1530 aa18.8■□□□□ 0.6
IFITM3-203ENST00000531688 KIF13AQ9H1H9 1805 aa18.78■□□□□ 0.6
IFITM3-203ENST00000531688 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
IFITM3-203ENST00000531688 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
IFITM3-203ENST00000531688 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
IFITM3-203ENST00000531688 ABCC10Q5T3U5 1492 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms