RNA–Protein interactions for RNA: ENST00000531606.1

NTRK1-208, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

TSL 3

Gene NTRK1, Length 642 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-208ENST00000531606 NISCHQ9Y2I1 1504 aa39.29■■■■□ 3.88
NTRK1-208ENST00000531606 CCDC180Q9P1Z9 1646 aa34.68■■■■□ 3.14
NTRK1-208ENST00000531606 ABCC9O60706 1549 aa33.2■■■□□ 2.91
NTRK1-208ENST00000531606 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
NTRK1-208ENST00000531606 DCAF1Q9Y4B6 1507 aa32.6■■■□□ 2.81
NTRK1-208ENST00000531606 MYO15BQ96JP2 1530 aa32.51■■■□□ 2.79
NTRK1-208ENST00000531606 NACADO15069 1562 aa32.45■■■□□ 2.78
NTRK1-208ENST00000531606 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
NTRK1-208ENST00000531606 RB1CC1Q8TDY2 1594 aa32.3■■■□□ 2.76
NTRK1-208ENST00000531606 SCRIBQ14160 1630 aa31.62■■■□□ 2.65
NTRK1-208ENST00000531606 UNC13AQ9UPW8 1703 aa31.55■■■□□ 2.64
NTRK1-208ENST00000531606 SHROOM4Q9ULL8 1493 aa31.32■■■□□ 2.6
NTRK1-208ENST00000531606 BICRAQ9NZM4 1560 aa31.28■■■□□ 2.6
NTRK1-208ENST00000531606 PABPN1Q86U42 306 aaKnown RBP eCLIP31.1■■■□□ 2.57
NTRK1-208ENST00000531606 CECR2Q9BXF3 1484 aa30.48■■■□□ 2.47
NTRK1-208ENST00000531606 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
NTRK1-208ENST00000531606 EIF4G1Q04637 1599 aaKnown RBP30.41■■■□□ 2.46
NTRK1-208ENST00000531606 SMARCA4P51532 1647 aa30.35■■■□□ 2.45
NTRK1-208ENST00000531606 MROH2BQ7Z745 1585 aa30.25■■■□□ 2.43
NTRK1-208ENST00000531606 RSF1Q96T23 1441 aaPredicted RBP30.15■■■□□ 2.42
NTRK1-208ENST00000531606 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
NTRK1-208ENST00000531606 PEG3Q9GZU2 1588 aa30.08■■■□□ 2.41
NTRK1-208ENST00000531606 SMARCA2P51531 1590 aa30.03■■■□□ 2.4
NTRK1-208ENST00000531606 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.4
NTRK1-208ENST00000531606 WIZO95785 1651 aa29.96■■■□□ 2.39
NTRK1-208ENST00000531606 NCAPD3P42695 1498 aa29.91■■■□□ 2.38
NTRK1-208ENST00000531606 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
NTRK1-208ENST00000531606 DNAJC5BQ9UF47 199 aa29.84■■■□□ 2.37
NTRK1-208ENST00000531606 BAZ1BQ9UIG0 1483 aaKnown RBP29.8■■■□□ 2.36
NTRK1-208ENST00000531606 SUPT5HO00267 1087 aaKnown RBP29.79■■■□□ 2.36
NTRK1-208ENST00000531606 TOP2AP11388 1531 aaKnown RBP29.72■■■□□ 2.35
NTRK1-208ENST00000531606 CCDC88BA6NC98 1476 aa29.34■■■□□ 2.29
NTRK1-208ENST00000531606 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
NTRK1-208ENST00000531606 CFTRP13569 1480 aa29.04■■■□□ 2.24
NTRK1-208ENST00000531606 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
NTRK1-208ENST00000531606 NESP48681 1621 aa28.92■■■□□ 2.22
NTRK1-208ENST00000531606 PRDM2Q13029 1718 aa28.9■■■□□ 2.22
NTRK1-208ENST00000531606 PDS5BQ9NTI5 1447 aa28.8■■■□□ 2.2
NTRK1-208ENST00000531606 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
NTRK1-208ENST00000531606 CEP164Q9UPV0 1460 aa28.63■■■□□ 2.17
NTRK1-208ENST00000531606 KIF21AQ7Z4S6 1674 aa28.63■■■□□ 2.17
NTRK1-208ENST00000531606 ERCC6Q03468 1493 aa28.59■■■□□ 2.17
NTRK1-208ENST00000531606 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
NTRK1-208ENST00000531606 ABCC8Q09428 1581 aa28.44■■■□□ 2.14
NTRK1-208ENST00000531606 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
NTRK1-208ENST00000531606 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
NTRK1-208ENST00000531606 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
NTRK1-208ENST00000531606 URB2Q14146 1524 aaKnown RBP28.38■■■□□ 2.13
NTRK1-208ENST00000531606 WDR62O43379 1518 aa28.36■■■□□ 2.13
NTRK1-208ENST00000531606 CUX1P39880 1505 aa28.36■■■□□ 2.13
NTRK1-208ENST00000531606 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
NTRK1-208ENST00000531606 SYNJ1O43426 1573 aa28.31■■■□□ 2.12
NTRK1-208ENST00000531606 TOP2BQ02880 1626 aa28.31■■■□□ 2.12
NTRK1-208ENST00000531606 BIVM-ERCC5R4GMW8 1640 aa28.31■■■□□ 2.12
NTRK1-208ENST00000531606 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
NTRK1-208ENST00000531606 TRIM41Q8WV44 630 aa28.16■■■□□ 2.1
NTRK1-208ENST00000531606 FGD5Q6ZNL6 1462 aa28.15■■■□□ 2.1
NTRK1-208ENST00000531606 POLA1P09884 1462 aaPredicted RBP28.14■■■□□ 2.09
NTRK1-208ENST00000531606 CUX2O14529 1486 aa28.11■■■□□ 2.09
NTRK1-208ENST00000531606 SOGA1O94964 1423 aa28.02■■■□□ 2.08
NTRK1-208ENST00000531606 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
NTRK1-208ENST00000531606 TARBP1Q13395 1621 aaKnown RBP27.98■■■□□ 2.07
NTRK1-208ENST00000531606 RAD54L2Q9Y4B4 1467 aa27.96■■■□□ 2.07
NTRK1-208ENST00000531606 ABCA10Q8WWZ4 1543 aa27.95■■■□□ 2.06
NTRK1-208ENST00000531606 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
NTRK1-208ENST00000531606 KIF27Q86VH2 1401 aa27.79■■■□□ 2.04
NTRK1-208ENST00000531606 ABCA5Q8WWZ7 1642 aa27.78■■■□□ 2.04
NTRK1-208ENST00000531606 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
NTRK1-208ENST00000531606 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
NTRK1-208ENST00000531606 EEA1Q15075 1411 aa27.74■■■□□ 2.03
NTRK1-208ENST00000531606 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
NTRK1-208ENST00000531606 GAPVD1Q14C86 1478 aa27.72■■■□□ 2.03
NTRK1-208ENST00000531606 AQRO60306 1485 aaKnown RBP eCLIP27.7■■■□□ 2.024e-9■■■■□ 21.7
NTRK1-208ENST00000531606 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
NTRK1-208ENST00000531606 ERICH3Q5RHP9 1530 aa27.64■■■□□ 2.02
NTRK1-208ENST00000531606 GRIN2BQ13224 1484 aa27.64■■■□□ 2.01
NTRK1-208ENST00000531606 PBRM1Q86U86 1689 aa27.63■■■□□ 2.01
NTRK1-208ENST00000531606 IGF1RP08069 1367 aa27.58■■■□□ 2.01
NTRK1-208ENST00000531606 MAGI1Q96QZ7 1491 aaPredicted RBP27.52■■■□□ 2
NTRK1-208ENST00000531606 CSRNP3Q8WYN3 585 aa27.52■■■□□ 2
NTRK1-208ENST00000531606 CUL7Q14999 1698 aa27.52■■■□□ 2
NTRK1-208ENST00000531606 FAM9AQ8IZU1 332 aaPredicted RBP27.49■■□□□ 1.99
NTRK1-208ENST00000531606 SNAPC4Q5SXM2 1469 aa27.49■■□□□ 1.99
NTRK1-208ENST00000531606 ADAMTS12P58397 1594 aa27.46■■□□□ 1.99
NTRK1-208ENST00000531606 FHAD1B1AJZ9 1412 aa27.44■■□□□ 1.98
NTRK1-208ENST00000531606 CARMIL1Q5VZK9 1371 aa27.43■■□□□ 1.98
NTRK1-208ENST00000531606 PRXQ9BXM0 1461 aa27.43■■□□□ 1.98
NTRK1-208ENST00000531606 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
NTRK1-208ENST00000531606 KIF21BO75037 1637 aa27.38■■□□□ 1.97
NTRK1-208ENST00000531606 RAPGEF2Q9Y4G8 1499 aa27.35■■□□□ 1.97
NTRK1-208ENST00000531606 GRIN2AQ12879 1464 aa27.28■■□□□ 1.96
NTRK1-208ENST00000531606 CHMP7Q8WUX9 453 aaPredicted RBP27.28■■□□□ 1.96
NTRK1-208ENST00000531606 GOLGA3Q08378 1498 aa27.25■■□□□ 1.95
NTRK1-208ENST00000531606 CHD1O14646 1710 aa27.24■■□□□ 1.95
NTRK1-208ENST00000531606 FBLN2P98095 1184 aa27.19■■□□□ 1.94
NTRK1-208ENST00000531606 NUP160Q12769 1436 aa27.16■■□□□ 1.94
NTRK1-208ENST00000531606 CEP170Q5SW79 1584 aa27.1■■□□□ 1.93
NTRK1-208ENST00000531606 CTTNBP2Q8WZ74 1663 aa27.07■■□□□ 1.92
NTRK1-208ENST00000531606 UBTFP17480 764 aaKnown RBP27.05■■□□□ 1.92
NTRK1-208ENST00000531606 KIAA0586Q9BVV6 1533 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms