RNA–Protein interactions for RNA: ENST00000531440.5

RNF170-208, Transcript of ring finger protein 170, humanhuman

TSL 4

Gene RNF170, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-208ENST00000531440 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
RNF170-208ENST00000531440 ABCC9O60706 1549 aa30.61■■■□□ 2.49
RNF170-208ENST00000531440 CCDC180Q9P1Z9 1646 aa30.31■■■□□ 2.44
RNF170-208ENST00000531440 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
RNF170-208ENST00000531440 RB1CC1Q8TDY2 1594 aa29.04■■■□□ 2.24
RNF170-208ENST00000531440 NACADO15069 1562 aa28.71■■■□□ 2.19
RNF170-208ENST00000531440 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
RNF170-208ENST00000531440 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
RNF170-208ENST00000531440 DCAF8L2P0C7V8 631 aa28.23■■■□□ 2.11
RNF170-208ENST00000531440 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
RNF170-208ENST00000531440 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
RNF170-208ENST00000531440 SHROOM4Q9ULL8 1493 aa27.84■■■□□ 2.05
RNF170-208ENST00000531440 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.02
RNF170-208ENST00000531440 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
RNF170-208ENST00000531440 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
RNF170-208ENST00000531440 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
RNF170-208ENST00000531440 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
RNF170-208ENST00000531440 SCRIBQ14160 1630 aa27.45■■□□□ 1.98
RNF170-208ENST00000531440 DNAJC5Q9H3Z4 198 aa27.17■■□□□ 1.94
RNF170-208ENST00000531440 CUX2O14529 1486 aa26.69■■□□□ 1.86
RNF170-208ENST00000531440 ERCC6Q03468 1493 aa26.51■■□□□ 1.83
RNF170-208ENST00000531440 NCAPD3P42695 1498 aa26.46■■□□□ 1.83
RNF170-208ENST00000531440 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
RNF170-208ENST00000531440 HMGXB3Q12766 1538 aa26.28■■□□□ 1.8
RNF170-208ENST00000531440 SMARCA2P51531 1590 aa26.26■■□□□ 1.79
RNF170-208ENST00000531440 SMARCA4P51532 1647 aa26.18■■□□□ 1.78
RNF170-208ENST00000531440 NESP48681 1621 aa26.14■■□□□ 1.77
RNF170-208ENST00000531440 THOC2Q8NI27 1593 aaKnown RBP26.08■■□□□ 1.77
RNF170-208ENST00000531440 BAZ1BQ9UIG0 1483 aaKnown RBP26.02■■□□□ 1.76
RNF170-208ENST00000531440 LAMC3Q9Y6N6 1575 aa26.01■■□□□ 1.75
RNF170-208ENST00000531440 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
RNF170-208ENST00000531440 PEG3Q9GZU2 1588 aa25.97■■□□□ 1.75
RNF170-208ENST00000531440 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
RNF170-208ENST00000531440 PDS5BQ9NTI5 1447 aa25.82■■□□□ 1.72
RNF170-208ENST00000531440 TRIM41Q8WV44 630 aa25.7■■□□□ 1.7
RNF170-208ENST00000531440 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
RNF170-208ENST00000531440 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
RNF170-208ENST00000531440 WDR62O43379 1518 aa25.61■■□□□ 1.69
RNF170-208ENST00000531440 CADPSQ9ULU8 1353 aa25.6■■□□□ 1.69
RNF170-208ENST00000531440 CEP164Q9UPV0 1460 aa25.42■■□□□ 1.66
RNF170-208ENST00000531440 WIZO95785 1651 aa25.37■■□□□ 1.65
RNF170-208ENST00000531440 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
RNF170-208ENST00000531440 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
RNF170-208ENST00000531440 CFTRP13569 1480 aa25.23■■□□□ 1.63
RNF170-208ENST00000531440 URB2Q14146 1524 aaKnown RBP25.13■■□□□ 1.61
RNF170-208ENST00000531440 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
RNF170-208ENST00000531440 RIMBP3CA6NJZ7 1639 aa25.1■■□□□ 1.61
RNF170-208ENST00000531440 RIMBP3BA6NNM3 1639 aa25.1■■□□□ 1.61
RNF170-208ENST00000531440 RIMBP3Q9UFD9 1639 aa25.1■■□□□ 1.61
RNF170-208ENST00000531440 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
RNF170-208ENST00000531440 ARHGEF11O15085 1522 aa24.95■■□□□ 1.58
RNF170-208ENST00000531440 IFT140Q96RY7 1462 aa24.94■■□□□ 1.58
RNF170-208ENST00000531440 RSF1Q96T23 1441 aaPredicted RBP24.94■■□□□ 1.58
RNF170-208ENST00000531440 ZNF608Q9ULD9 1512 aaPredicted RBP24.88■■□□□ 1.57
RNF170-208ENST00000531440 EIF4G3O43432 1585 aaKnown RBP24.81■■□□□ 1.56
RNF170-208ENST00000531440 TOPBP1Q92547 1522 aa24.8■■□□□ 1.56
RNF170-208ENST00000531440 ABCC8Q09428 1581 aa24.78■■□□□ 1.56
RNF170-208ENST00000531440 CHD1O14646 1710 aa24.75■■□□□ 1.55
RNF170-208ENST00000531440 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
RNF170-208ENST00000531440 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.55
RNF170-208ENST00000531440 CYB5RLQ6IPT4 315 aa24.7■■□□□ 1.54
RNF170-208ENST00000531440 TARBP1Q13395 1621 aaKnown RBP24.65■■□□□ 1.54
RNF170-208ENST00000531440 ARAP1Q96P48 1450 aa24.64■■□□□ 1.53
RNF170-208ENST00000531440 TRHP20396 242 aaPredicted RBP24.6■■□□□ 1.53
RNF170-208ENST00000531440 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.52
RNF170-208ENST00000531440 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
RNF170-208ENST00000531440 FBLN2P98095 1184 aa24.49■■□□□ 1.51
RNF170-208ENST00000531440 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
RNF170-208ENST00000531440 CLASP1Q7Z460 1538 aa24.41■■□□□ 1.5
RNF170-208ENST00000531440 SYNJ1O43426 1573 aa24.39■■□□□ 1.5
RNF170-208ENST00000531440 RAD54L2Q9Y4B4 1467 aa24.36■■□□□ 1.49
RNF170-208ENST00000531440 SOGA1O94964 1423 aa24.35■■□□□ 1.49
RNF170-208ENST00000531440 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
RNF170-208ENST00000531440 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.49
RNF170-208ENST00000531440 TDRD9Q8NDG6 1382 aaKnown RBP24.33■■□□□ 1.49
RNF170-208ENST00000531440 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
RNF170-208ENST00000531440 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
RNF170-208ENST00000531440 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
RNF170-208ENST00000531440 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
RNF170-208ENST00000531440 SYNJ2O15056 1496 aa24.24■■□□□ 1.47
RNF170-208ENST00000531440 PBRM1Q86U86 1689 aa24.2■■□□□ 1.46
RNF170-208ENST00000531440 CUX1P39880 1505 aa24.16■■□□□ 1.46
RNF170-208ENST00000531440 GAPVD1Q14C86 1478 aa24.16■■□□□ 1.46
RNF170-208ENST00000531440 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
RNF170-208ENST00000531440 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
RNF170-208ENST00000531440 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
RNF170-208ENST00000531440 ERCC6L2Q5T890 1561 aa23.92■■□□□ 1.42
RNF170-208ENST00000531440 CEP170Q5SW79 1584 aa23.91■■□□□ 1.42
RNF170-208ENST00000531440 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
RNF170-208ENST00000531440 ADAMTS12P58397 1594 aa23.88■■□□□ 1.41
RNF170-208ENST00000531440 KIF13AQ9H1H9 1805 aa23.88■■□□□ 1.41
RNF170-208ENST00000531440 NUP160Q12769 1436 aa23.87■■□□□ 1.41
RNF170-208ENST00000531440 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
RNF170-208ENST00000531440 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
RNF170-208ENST00000531440 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
RNF170-208ENST00000531440 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
RNF170-208ENST00000531440 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
RNF170-208ENST00000531440 PRG4Q92954 1404 aaPredicted RBP23.65■■□□□ 1.38
RNF170-208ENST00000531440 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
RNF170-208ENST00000531440 MAPKBP1O60336 1514 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms