RNA–Protein interactions for RNA: ENST00000531345.1

RCN1-207, Transcript of reticulocalbin 1, humanhuman

TSL 2

Gene RCN1, Length 2,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-207ENST00000531345 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
RCN1-207ENST00000531345 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
RCN1-207ENST00000531345 CHIC1Q5VXU3 224 aa14.01□□□□□ -0.17
RCN1-207ENST00000531345 AEBP2Q6ZN18 517 aaPredicted RBP13.98□□□□□ -0.17
RCN1-207ENST00000531345 ZCCHC6Q5VYS8 1495 aaKnown RBP13.79□□□□□ -0.2
RCN1-207ENST00000531345 ABCC9O60706 1549 aa13.74□□□□□ -0.21
RCN1-207ENST00000531345 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
RCN1-207ENST00000531345 MYO15BQ96JP2 1530 aa13.7□□□□□ -0.22
RCN1-207ENST00000531345 NACADO15069 1562 aa13.6□□□□□ -0.23
RCN1-207ENST00000531345 RB1CC1Q8TDY2 1594 aa13.5□□□□□ -0.25
RCN1-207ENST00000531345 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
RCN1-207ENST00000531345 SCRIBQ14160 1630 aa13.15□□□□□ -0.3
RCN1-207ENST00000531345 UNC13AQ9UPW8 1703 aa13.15□□□□□ -0.3
RCN1-207ENST00000531345 SHROOM4Q9ULL8 1493 aa13.08□□□□□ -0.32
RCN1-207ENST00000531345 BICRAQ9NZM4 1560 aa13.04□□□□□ -0.32
RCN1-207ENST00000531345 PABPN1Q86U42 306 aaKnown RBP eCLIP12.86□□□□□ -0.351e-11■■■■■ 42.3
RCN1-207ENST00000531345 BAZ1AQ9NRL2 1556 aaPredicted RBP12.75□□□□□ -0.37
RCN1-207ENST00000531345 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
RCN1-207ENST00000531345 SMARCA4P51532 1647 aa12.69□□□□□ -0.38
RCN1-207ENST00000531345 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
RCN1-207ENST00000531345 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
RCN1-207ENST00000531345 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
RCN1-207ENST00000531345 PEG3Q9GZU2 1588 aa12.64□□□□□ -0.39
RCN1-207ENST00000531345 SMARCA2P51531 1590 aa12.58□□□□□ -0.4
RCN1-207ENST00000531345 PHF23Q9BUL5 403 aaPredicted RBP12.58□□□□□ -0.4
RCN1-207ENST00000531345 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
RCN1-207ENST00000531345 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
RCN1-207ENST00000531345 WIZO95785 1651 aa12.51□□□□□ -0.41
RCN1-207ENST00000531345 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
RCN1-207ENST00000531345 HMGXB3Q12766 1538 aa12.5□□□□□ -0.41
RCN1-207ENST00000531345 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
RCN1-207ENST00000531345 SUPT5HO00267 1087 aaKnown RBP12.44□□□□□ -0.42
RCN1-207ENST00000531345 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
RCN1-207ENST00000531345 DNAJC5BQ9UF47 199 aa12.29□□□□□ -0.44
RCN1-207ENST00000531345 CCDC88BA6NC98 1476 aa12.28□□□□□ -0.44
RCN1-207ENST00000531345 CFTRP13569 1480 aa12.15□□□□□ -0.46
RCN1-207ENST00000531345 CADPSQ9ULU8 1353 aa12.15□□□□□ -0.47
RCN1-207ENST00000531345 LAMC3Q9Y6N6 1575 aa12.14□□□□□ -0.47
RCN1-207ENST00000531345 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
RCN1-207ENST00000531345 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
RCN1-207ENST00000531345 NESP48681 1621 aa11.98□□□□□ -0.49
RCN1-207ENST00000531345 FANCD2Q9BXW9 1451 aa11.97□□□□□ -0.49
RCN1-207ENST00000531345 ABCC8Q09428 1581 aa11.95□□□□□ -0.5
RCN1-207ENST00000531345 CEP164Q9UPV0 1460 aa11.93□□□□□ -0.5
RCN1-207ENST00000531345 KIF21AQ7Z4S6 1674 aa11.9□□□□□ -0.5
RCN1-207ENST00000531345 WRNQ14191 1432 aaPredicted RBP eCLIP11.9□□□□□ -0.5
RCN1-207ENST00000531345 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
RCN1-207ENST00000531345 TOP2BQ02880 1626 aa11.88□□□□□ -0.51
RCN1-207ENST00000531345 DNMBPQ6XZF7 1577 aa11.87□□□□□ -0.51
RCN1-207ENST00000531345 MRC2Q9UBG0 1479 aa11.87□□□□□ -0.51
RCN1-207ENST00000531345 CUX1P39880 1505 aa11.85□□□□□ -0.51
RCN1-207ENST00000531345 ERCC6Q03468 1493 aa11.85□□□□□ -0.51
RCN1-207ENST00000531345 WDR62O43379 1518 aa11.83□□□□□ -0.52
RCN1-207ENST00000531345 SYNJ1O43426 1573 aa11.83□□□□□ -0.52
RCN1-207ENST00000531345 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
RCN1-207ENST00000531345 URB2Q14146 1524 aaKnown RBP11.82□□□□□ -0.52
RCN1-207ENST00000531345 TRIM41Q8WV44 630 aa11.82□□□□□ -0.52
RCN1-207ENST00000531345 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
RCN1-207ENST00000531345 FGD5Q6ZNL6 1462 aa11.75□□□□□ -0.53
RCN1-207ENST00000531345 POLA1P09884 1462 aaPredicted RBP11.73□□□□□ -0.53
RCN1-207ENST00000531345 WDR97A6NE52 1622 aa11.73□□□□□ -0.53
RCN1-207ENST00000531345 EEA1Q15075 1411 aa11.72□□□□□ -0.53
RCN1-207ENST00000531345 IFT140Q96RY7 1462 aa11.71□□□□□ -0.53
RCN1-207ENST00000531345 ABCA10Q8WWZ4 1543 aa11.71□□□□□ -0.54
RCN1-207ENST00000531345 CUX2O14529 1486 aa11.71□□□□□ -0.54
RCN1-207ENST00000531345 SOGA1O94964 1423 aa11.7□□□□□ -0.54
RCN1-207ENST00000531345 TARBP1Q13395 1621 aaKnown RBP11.69□□□□□ -0.54
RCN1-207ENST00000531345 KIF27Q86VH2 1401 aa11.66□□□□□ -0.54
RCN1-207ENST00000531345 RAD54L2Q9Y4B4 1467 aa11.64□□□□□ -0.55
RCN1-207ENST00000531345 ABCA5Q8WWZ7 1642 aa11.62□□□□□ -0.55
RCN1-207ENST00000531345 ERICH3Q5RHP9 1530 aa11.59□□□□□ -0.55
RCN1-207ENST00000531345 GAPVD1Q14C86 1478 aa11.58□□□□□ -0.56
RCN1-207ENST00000531345 PLPPR3Q6T4P5 718 aa11.57□□□□□ -0.56
RCN1-207ENST00000531345 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
RCN1-207ENST00000531345 IGF1RP08069 1367 aa11.56□□□□□ -0.56
RCN1-207ENST00000531345 RUSC2Q8N2Y8 1516 aa11.56□□□□□ -0.56
RCN1-207ENST00000531345 GRIN2BQ13224 1484 aa11.55□□□□□ -0.56
RCN1-207ENST00000531345 CUL7Q14999 1698 aa11.55□□□□□ -0.56
RCN1-207ENST00000531345 PBRM1Q86U86 1689 aa11.54□□□□□ -0.56
RCN1-207ENST00000531345 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
RCN1-207ENST00000531345 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
RCN1-207ENST00000531345 KIF21BO75037 1637 aa11.53□□□□□ -0.56
RCN1-207ENST00000531345 ZNF608Q9ULD9 1512 aaPredicted RBP11.53□□□□□ -0.56
RCN1-207ENST00000531345 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
RCN1-207ENST00000531345 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.57
RCN1-207ENST00000531345 MAGI1Q96QZ7 1491 aaPredicted RBP11.51□□□□□ -0.57
RCN1-207ENST00000531345 CARMIL1Q5VZK9 1371 aa11.49□□□□□ -0.57
RCN1-207ENST00000531345 FHAD1B1AJZ9 1412 aa11.48□□□□□ -0.57
RCN1-207ENST00000531345 SENP3Q9H4L4 574 aaPredicted RBP11.48□□□□□ -0.57
RCN1-207ENST00000531345 RAPGEF2Q9Y4G8 1499 aa11.47□□□□□ -0.57
RCN1-207ENST00000531345 ADAMTS12P58397 1594 aa11.47□□□□□ -0.57
RCN1-207ENST00000531345 GOLGA3Q08378 1498 aa11.46□□□□□ -0.57
RCN1-207ENST00000531345 FAM9AQ8IZU1 332 aaPredicted RBP11.44□□□□□ -0.58
RCN1-207ENST00000531345 SYNJ2O15056 1496 aa11.44□□□□□ -0.58
RCN1-207ENST00000531345 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
RCN1-207ENST00000531345 TNIKQ9UKE5 1360 aa11.41□□□□□ -0.58
RCN1-207ENST00000531345 GRIN2AQ12879 1464 aa11.38□□□□□ -0.59
RCN1-207ENST00000531345 NUP160Q12769 1436 aa11.35□□□□□ -0.59
RCN1-207ENST00000531345 CTTNBP2Q8WZ74 1663 aa11.35□□□□□ -0.59
RCN1-207ENST00000531345 CHMP7Q8WUX9 453 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms