RNA–Protein interactions for RNA: ENST00000531156.5

PSMA1-211, Transcript of proteasome subunit alpha 1, humanhuman

TSL 4

Gene PSMA1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-211ENST00000531156 NISCHQ9Y2I1 1504 aa21.72■■□□□ 1.07
PSMA1-211ENST00000531156 ABCC9O60706 1549 aa19.89■□□□□ 0.77
PSMA1-211ENST00000531156 CCDC180Q9P1Z9 1646 aa19.56■□□□□ 0.72
PSMA1-211ENST00000531156 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
PSMA1-211ENST00000531156 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
PSMA1-211ENST00000531156 NACADO15069 1562 aa18.55■□□□□ 0.56
PSMA1-211ENST00000531156 DCAF8L2P0C7V8 631 aa18.35■□□□□ 0.53
PSMA1-211ENST00000531156 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
PSMA1-211ENST00000531156 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
PSMA1-211ENST00000531156 DNAJC5Q9H3Z4 198 aa18.21■□□□□ 0.51
PSMA1-211ENST00000531156 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
PSMA1-211ENST00000531156 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.49
PSMA1-211ENST00000531156 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
PSMA1-211ENST00000531156 CECR2Q9BXF3 1484 aa18■□□□□ 0.47
PSMA1-211ENST00000531156 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
PSMA1-211ENST00000531156 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
PSMA1-211ENST00000531156 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
PSMA1-211ENST00000531156 SCRIBQ14160 1630 aa17.73■□□□□ 0.43
PSMA1-211ENST00000531156 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
PSMA1-211ENST00000531156 CUX2O14529 1486 aa17.46■□□□□ 0.39
PSMA1-211ENST00000531156 ERCC6Q03468 1493 aa17.25■□□□□ 0.35
PSMA1-211ENST00000531156 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
PSMA1-211ENST00000531156 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
PSMA1-211ENST00000531156 ATAD2BQ9ULI0 1458 aa17.01■□□□□ 0.31
PSMA1-211ENST00000531156 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
PSMA1-211ENST00000531156 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
PSMA1-211ENST00000531156 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
PSMA1-211ENST00000531156 BAZ1AQ9NRL2 1556 aaPredicted RBP16.9■□□□□ 0.3
PSMA1-211ENST00000531156 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.29
PSMA1-211ENST00000531156 NESP48681 1621 aa16.87■□□□□ 0.29
PSMA1-211ENST00000531156 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
PSMA1-211ENST00000531156 PEG3Q9GZU2 1588 aa16.82■□□□□ 0.28
PSMA1-211ENST00000531156 LAMC3Q9Y6N6 1575 aa16.74■□□□□ 0.27
PSMA1-211ENST00000531156 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
PSMA1-211ENST00000531156 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
PSMA1-211ENST00000531156 KIF21AQ7Z4S6 1674 aa16.63■□□□□ 0.25
PSMA1-211ENST00000531156 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
PSMA1-211ENST00000531156 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
PSMA1-211ENST00000531156 WDR62O43379 1518 aa16.48■□□□□ 0.23
PSMA1-211ENST00000531156 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
PSMA1-211ENST00000531156 WIZO95785 1651 aa16.45■□□□□ 0.22
PSMA1-211ENST00000531156 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
PSMA1-211ENST00000531156 RIMBP3CA6NJZ7 1639 aa16.4■□□□□ 0.22
PSMA1-211ENST00000531156 RIMBP3BA6NNM3 1639 aa16.4■□□□□ 0.22
PSMA1-211ENST00000531156 RIMBP3Q9UFD9 1639 aa16.4■□□□□ 0.22
PSMA1-211ENST00000531156 FANCD2Q9BXW9 1451 aa16.37■□□□□ 0.21
PSMA1-211ENST00000531156 CFTRP13569 1480 aa16.36■□□□□ 0.21
PSMA1-211ENST00000531156 RSF1Q96T23 1441 aaPredicted RBP16.35■□□□□ 0.21
PSMA1-211ENST00000531156 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
PSMA1-211ENST00000531156 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
PSMA1-211ENST00000531156 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
PSMA1-211ENST00000531156 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
PSMA1-211ENST00000531156 URB2Q14146 1524 aaKnown RBP16.2■□□□□ 0.18
PSMA1-211ENST00000531156 CYB5RLQ6IPT4 315 aa16.14■□□□□ 0.17
PSMA1-211ENST00000531156 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
PSMA1-211ENST00000531156 CCDC88BA6NC98 1476 aa16.11■□□□□ 0.17
PSMA1-211ENST00000531156 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
PSMA1-211ENST00000531156 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
PSMA1-211ENST00000531156 ARAP1Q96P48 1450 aa16.07■□□□□ 0.16
PSMA1-211ENST00000531156 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
PSMA1-211ENST00000531156 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
PSMA1-211ENST00000531156 DNMBPQ6XZF7 1577 aa15.99■□□□□ 0.15
PSMA1-211ENST00000531156 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
PSMA1-211ENST00000531156 CHD1O14646 1710 aa15.91■□□□□ 0.14
PSMA1-211ENST00000531156 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
PSMA1-211ENST00000531156 AQRO60306 1485 aaKnown RBP eCLIP15.86■□□□□ 0.139e-8■■■□□ 18.7
PSMA1-211ENST00000531156 POLA1P09884 1462 aaPredicted RBP15.86■□□□□ 0.13
PSMA1-211ENST00000531156 WDR97A6NE52 1622 aa15.83■□□□□ 0.12
PSMA1-211ENST00000531156 SOGA1O94964 1423 aa15.82■□□□□ 0.12
PSMA1-211ENST00000531156 FBLN2P98095 1184 aa15.81■□□□□ 0.12
PSMA1-211ENST00000531156 RAD54L2Q9Y4B4 1467 aa15.77■□□□□ 0.11
PSMA1-211ENST00000531156 TDRD9Q8NDG6 1382 aaKnown RBP15.76■□□□□ 0.11
PSMA1-211ENST00000531156 FGD5Q6ZNL6 1462 aa15.74■□□□□ 0.11
PSMA1-211ENST00000531156 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
PSMA1-211ENST00000531156 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
PSMA1-211ENST00000531156 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
PSMA1-211ENST00000531156 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
PSMA1-211ENST00000531156 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.11
PSMA1-211ENST00000531156 ILDR1Q86SU0 546 aaPredicted RBP15.7■□□□□ 0.1
PSMA1-211ENST00000531156 CUX1P39880 1505 aa15.69■□□□□ 0.1
PSMA1-211ENST00000531156 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
PSMA1-211ENST00000531156 SYNJ2O15056 1496 aa15.66■□□□□ 0.1
PSMA1-211ENST00000531156 SUPT5HO00267 1087 aaKnown RBP15.66■□□□□ 0.1
PSMA1-211ENST00000531156 GAPVD1Q14C86 1478 aa15.63■□□□□ 0.09
PSMA1-211ENST00000531156 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
PSMA1-211ENST00000531156 PBRM1Q86U86 1689 aa15.55■□□□□ 0.08
PSMA1-211ENST00000531156 WRNQ14191 1432 aaPredicted RBP eCLIP15.55■□□□□ 0.08
PSMA1-211ENST00000531156 ABCA5Q8WWZ7 1642 aa15.54■□□□□ 0.08
PSMA1-211ENST00000531156 GRIN2AQ12879 1464 aa15.48■□□□□ 0.07
PSMA1-211ENST00000531156 FHAD1B1AJZ9 1412 aa15.45■□□□□ 0.06
PSMA1-211ENST00000531156 TOP2BQ02880 1626 aa15.45■□□□□ 0.06
PSMA1-211ENST00000531156 NUP160Q12769 1436 aa15.44■□□□□ 0.06
PSMA1-211ENST00000531156 ADAMTS12P58397 1594 aa15.44■□□□□ 0.06
PSMA1-211ENST00000531156 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
PSMA1-211ENST00000531156 KIF13AQ9H1H9 1805 aa15.43■□□□□ 0.06
PSMA1-211ENST00000531156 ERICH3Q5RHP9 1530 aa15.42■□□□□ 0.06
PSMA1-211ENST00000531156 ERCC6L2Q5T890 1561 aa15.41■□□□□ 0.06
PSMA1-211ENST00000531156 KDM4FA0A1W2PPD8 638 aa15.4■□□□□ 0.06
PSMA1-211ENST00000531156 CEP170Q5SW79 1584 aa15.38■□□□□ 0.05
PSMA1-211ENST00000531156 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms