RNA–Protein interactions for RNA: ENST00000531150.5

CNKSR1-213, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-213ENST00000531150 NISCHQ9Y2I1 1504 aa35.17■■■■□ 3.22
CNKSR1-213ENST00000531150 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.59
CNKSR1-213ENST00000531150 ABCC9O60706 1549 aa30.49■■■□□ 2.47
CNKSR1-213ENST00000531150 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
CNKSR1-213ENST00000531150 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
CNKSR1-213ENST00000531150 RB1CC1Q8TDY2 1594 aa29.32■■■□□ 2.28
CNKSR1-213ENST00000531150 NACADO15069 1562 aa29.31■■■□□ 2.28
CNKSR1-213ENST00000531150 MYO15BQ96JP2 1530 aa29.16■■■□□ 2.26
CNKSR1-213ENST00000531150 DCAF1Q9Y4B6 1507 aa29.09■■■□□ 2.25
CNKSR1-213ENST00000531150 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
CNKSR1-213ENST00000531150 SCRIBQ14160 1630 aa28.52■■■□□ 2.16
CNKSR1-213ENST00000531150 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
CNKSR1-213ENST00000531150 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
CNKSR1-213ENST00000531150 SHROOM4Q9ULL8 1493 aa28.11■■■□□ 2.09
CNKSR1-213ENST00000531150 DNAJC5BQ9UF47 199 aa27.96■■■□□ 2.07
CNKSR1-213ENST00000531150 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
CNKSR1-213ENST00000531150 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
CNKSR1-213ENST00000531150 CECR2Q9BXF3 1484 aa27.44■■□□□ 1.98
CNKSR1-213ENST00000531150 SMARCA4P51532 1647 aa27.28■■□□□ 1.96
CNKSR1-213ENST00000531150 BAZ1AQ9NRL2 1556 aaPredicted RBP27.23■■□□□ 1.95
CNKSR1-213ENST00000531150 MROH2BQ7Z745 1585 aa27.14■■□□□ 1.94
CNKSR1-213ENST00000531150 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
CNKSR1-213ENST00000531150 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
CNKSR1-213ENST00000531150 SMARCA2P51531 1590 aa27.04■■□□□ 1.92
CNKSR1-213ENST00000531150 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.91
CNKSR1-213ENST00000531150 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
CNKSR1-213ENST00000531150 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
CNKSR1-213ENST00000531150 WIZO95785 1651 aa26.85■■□□□ 1.89
CNKSR1-213ENST00000531150 RSF1Q96T23 1441 aaPredicted RBP26.85■■□□□ 1.89
CNKSR1-213ENST00000531150 TOP2AP11388 1531 aaKnown RBP26.54■■□□□ 1.84
CNKSR1-213ENST00000531150 NESP48681 1621 aa26.44■■□□□ 1.82
CNKSR1-213ENST00000531150 LAMC3Q9Y6N6 1575 aa26.32■■□□□ 1.8
CNKSR1-213ENST00000531150 CADPSQ9ULU8 1353 aa26.28■■□□□ 1.8
CNKSR1-213ENST00000531150 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
CNKSR1-213ENST00000531150 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
CNKSR1-213ENST00000531150 SUPT5HO00267 1087 aaKnown RBP26.21■■□□□ 1.79
CNKSR1-213ENST00000531150 CFTRP13569 1480 aa26.16■■□□□ 1.78
CNKSR1-213ENST00000531150 PDS5BQ9NTI5 1447 aa26.13■■□□□ 1.77
CNKSR1-213ENST00000531150 KIF21AQ7Z4S6 1674 aa26.11■■□□□ 1.77
CNKSR1-213ENST00000531150 THOC2Q8NI27 1593 aaKnown RBP26■■□□□ 1.75
CNKSR1-213ENST00000531150 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
CNKSR1-213ENST00000531150 PRDM2Q13029 1718 aa25.93■■□□□ 1.74
CNKSR1-213ENST00000531150 CUX2O14529 1486 aa25.92■■□□□ 1.74
CNKSR1-213ENST00000531150 CEP164Q9UPV0 1460 aa25.92■■□□□ 1.74
CNKSR1-213ENST00000531150 MRC2Q9UBG0 1479 aa25.88■■□□□ 1.73
CNKSR1-213ENST00000531150 WDR62O43379 1518 aa25.81■■□□□ 1.72
CNKSR1-213ENST00000531150 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
CNKSR1-213ENST00000531150 TOPBP1Q92547 1522 aa25.58■■□□□ 1.69
CNKSR1-213ENST00000531150 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
CNKSR1-213ENST00000531150 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
CNKSR1-213ENST00000531150 CUX1P39880 1505 aa25.45■■□□□ 1.66
CNKSR1-213ENST00000531150 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.65
CNKSR1-213ENST00000531150 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
CNKSR1-213ENST00000531150 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
CNKSR1-213ENST00000531150 TARBP1Q13395 1621 aaKnown RBP25.32■■□□□ 1.64
CNKSR1-213ENST00000531150 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
CNKSR1-213ENST00000531150 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
CNKSR1-213ENST00000531150 WRNQ14191 1432 aaPredicted RBP eCLIP25.28■■□□□ 1.64
CNKSR1-213ENST00000531150 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
CNKSR1-213ENST00000531150 SOGA1O94964 1423 aa25.26■■□□□ 1.63
CNKSR1-213ENST00000531150 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
CNKSR1-213ENST00000531150 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
CNKSR1-213ENST00000531150 EIF4G3O43432 1585 aaKnown RBP25.19■■□□□ 1.62
CNKSR1-213ENST00000531150 AQRO60306 1485 aaKnown RBP eCLIP25.16■■□□□ 1.62
CNKSR1-213ENST00000531150 WDR97A6NE52 1622 aa25.13■■□□□ 1.61
CNKSR1-213ENST00000531150 TDRD9Q8NDG6 1382 aaKnown RBP25.13■■□□□ 1.61
CNKSR1-213ENST00000531150 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
CNKSR1-213ENST00000531150 DNAJC5Q9H3Z4 198 aa25.04■■□□□ 1.6
CNKSR1-213ENST00000531150 ABCA5Q8WWZ7 1642 aa24.99■■□□□ 1.59
CNKSR1-213ENST00000531150 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
CNKSR1-213ENST00000531150 GRIN2BQ13224 1484 aa24.95■■□□□ 1.58
CNKSR1-213ENST00000531150 SNAPC4Q5SXM2 1469 aa24.93■■□□□ 1.58
CNKSR1-213ENST00000531150 PBRM1Q86U86 1689 aa24.92■■□□□ 1.58
CNKSR1-213ENST00000531150 MAGI1Q96QZ7 1491 aaPredicted RBP24.86■■□□□ 1.57
CNKSR1-213ENST00000531150 OSCARQ8IYS5 282 aa24.85■■□□□ 1.57
CNKSR1-213ENST00000531150 CHD1O14646 1710 aa24.85■■□□□ 1.57
CNKSR1-213ENST00000531150 FBLN2P98095 1184 aa24.8■■□□□ 1.56
CNKSR1-213ENST00000531150 SYNJ2O15056 1496 aa24.77■■□□□ 1.56
CNKSR1-213ENST00000531150 ERICH3Q5RHP9 1530 aa24.77■■□□□ 1.56
CNKSR1-213ENST00000531150 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
CNKSR1-213ENST00000531150 ADAMTS12P58397 1594 aa24.74■■□□□ 1.55
CNKSR1-213ENST00000531150 KIF27Q86VH2 1401 aa24.72■■□□□ 1.55
CNKSR1-213ENST00000531150 TRIM41Q8WV44 630 aa24.72■■□□□ 1.55
CNKSR1-213ENST00000531150 FHAD1B1AJZ9 1412 aa24.68■■□□□ 1.54
CNKSR1-213ENST00000531150 IGF1RP08069 1367 aa24.66■■□□□ 1.54
CNKSR1-213ENST00000531150 GRIN2AQ12879 1464 aa24.64■■□□□ 1.53
CNKSR1-213ENST00000531150 RUSC2Q8N2Y8 1516 aa24.62■■□□□ 1.53
CNKSR1-213ENST00000531150 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
CNKSR1-213ENST00000531150 CUL7Q14999 1698 aa24.56■■□□□ 1.52
CNKSR1-213ENST00000531150 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
CNKSR1-213ENST00000531150 CEP170Q5SW79 1584 aa24.54■■□□□ 1.52
CNKSR1-213ENST00000531150 NUP160Q12769 1436 aa24.53■■□□□ 1.52
CNKSR1-213ENST00000531150 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
CNKSR1-213ENST00000531150 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
CNKSR1-213ENST00000531150 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
CNKSR1-213ENST00000531150 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
CNKSR1-213ENST00000531150 CARMIL1Q5VZK9 1371 aa24.49■■□□□ 1.51
CNKSR1-213ENST00000531150 RAPGEF2Q9Y4G8 1499 aa24.35■■□□□ 1.49
CNKSR1-213ENST00000531150 SHROOM2Q13796 1616 aa24.34■■□□□ 1.49
CNKSR1-213ENST00000531150 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms